Silkworm Genome Informatics Database

Gene

KWMTBOMO16549

Pre Gene Modal

BGIBMGA008526

Annotation

PREDICTED:_uncharacterized_protein_LOC105841662_[Bombyx_mori]

Location

Bomo_Scaf012(-):69978-71625 View in EpiBrowser

Location in the cell

Mitochondrial Reliability : 1.653 Nuclear Reliability : 2.078

CDS

ATGTTTCGTACACCAACAACAACTGGCGCTGTCAAAAAATCCACTACTCCCAGCCCCGCTACTTCACCTGCGGCAGTATCGGAAGCTGCCAGGACTTTTATCAAGAGACCGGAAACGAAAAGAAGGTCGCTTGATAATATGGACCTGTACAGAAGGCAGCAGCAGAACTACGCGGAGATACCGAGCGAAAAACTACTCCTGGAAGTAATGAAGACATTTGAGGATATACCCTCAAAGGTTCAGCAGTACCCTCAGATGAGACGGGACATCAAGTCCTTCCTGGAGGTACAATCGGACAGATGTATCCGCATGCTTTTTGAGTTGAGTAAGCGGATGAAGACTCTGGAAGCAGCAGCGCCCGAAACTAGTACACAGACAGCAGCTTTATTTTCTGACAAAGAACAAAAACTGCTGGAAAAACTGGCAGAGATGGAAAACGTAATAACCACGCGGATTAGTCAAACGGAAGCCAACCTGAAGAAAGAAGTAGCGGAACTTAACTCAACAAACGACGATCGAGGCGCTAACATCGTGGAATACGTTTACAACAGATTTGAGGAGGCCAAGGTTGCAATAGGTAAATCGACCGAGGGGGTCGTGGGACGGACGCAAGCTCGTCTCGAAGATCTGGTTGGCACTGTCGCCGGAGATGTTGCCGAAGCCAAAATGCAAATAAGCGATATTGCAAAAGGGTTGATATCTGAGAGTAGCACGATCCCCAAAACGTATGCCAACGCCGCAGCAGCCAAGCCCGGGCGTCGTCCGGCGCTTTATTCGATGGCGGTAACCTTTGAAGACGATCAAGAGACTGCGGAAGAGGTACTCGCGAGAGTAAAGAAGGCGGTTGACGCTGGGGGTACTGGCCTCAAGGTAAATAAAGTAAGAAAGGCCAAGAATAGCGCAGTCATACTAGGCTGCGACACGGAAATTGAACTGGAAAAGGTGAGAGAGAGGATAGAAAGCCACGGCGAGGGGTTAATCGTAAAGCCCATGAAGAACAAGGACCCACTCGTCGTCCTTAAAGACGTATTTATAGACAACGACGACGATGAAATGATAAAGGCCCTTTACGCCCAAAACACCGATATCTTCATGGGCCTATCACAAGAGGAGATGGACTTCATAATCAAATATAAAAAGAGGACCAGAAATCCTAAGACCTCCCACGTTGTCATCCAGGTACGGCCGAAGGTATGGCAGAGGATGACGGAGGCTGGCGCCCTCTATCTGGACCTGCAAAGAGTCAGGGTAGAGGACCAGTCTCCGCTCATTCAGTGCACGAAGTGCCTCGCTTTCGGACATGGCCGCAAATTATGCACCGAGAGTGTGGACAGGTGCAGTCACTGTGGAGGCCCACACCTACGCGAGAAATGCGCCGATTATGCCGCGGGAATCGAACCTCAGTGCTGCAATTGTCTACACTCCAAGTTGCGGAGTACGGATCACAACGCTTTCAGTGTCGAGTGTCCAACCCGCAAAAAGTGGGACTACCTGGCAAGATCAAACACGGCATACATATGA

Protein

MFRTPTTTGAVKKSTTPSPATSPAAVSEAARTFIKRPETKRRSLDNMDLYRRQQQNYAEIPSEKLLLEVMKTFEDIPSKVQQYPQMRRDIKSFLEVQSDRCIRMLFELSKRMKTLEAAAPETSTQTAALFSDKEQKLLEKLAEMENVITTRISQTEANLKKEVAELNSTNDDRGANIVEYVYNRFEEAKVAIGKSTEGVVGRTQARLEDLVGTVAGDVAEAKMQISDIAKGLISESSTIPKTYANAAAAKPGRRPALYSMAVTFEDDQETAEEVLARVKKAVDAGGTGLKVNKVRKAKNSAVILGCDTEIELEKVRERIESHGEGLIVKPMKNKDPLVVLKDVFIDNDDDEMIKALYAQNTDIFMGLSQEEMDFIIKYKKRTRNPKTSHVVIQVRPKVWQRMTEAGALYLDLQRVRVEDQSPLIQCTKCLAFGHGRKLCTESVDRCSHCGGPHLREKCADYAAGIEPQCCNCLHSKLRSTDHNAFSVECPTRKKWDYLARSNTAYI

Uniprot

H9JG79 A0A212EIV6 A0A2H1WF63 A0A2P8XUI0 A0A0J7K9V2 J9LES5 + More
K7JPM6

Pubmed

19121390 22118469 29403074 20075255

EMBL

BABH01002157 AGBW02014565 OWR41401.1 ODYU01008279 SOQ51725.1 PYGN01001327 + More
PSN35652.1 LBMM01010819 KMQ87208.1 ABLF02008889 ABLF02041820 AAZX01023354 AAZX01024918

Proteomes

UP000005204 UP000007151 UP000245037 UP000036403 UP000007819 UP000002358 + More

PRIDE

H9JG79

Pfam

PF01826   TIL        + More
PF00078   RVT_1
PF14529   Exo_endo_phos_2
PF00098   zf-CCHC

Interpro

IPR002919   TIL_dom        + More
IPR036084   Ser_inhib-like_sf
IPR001878   Znf_CCHC
IPR036691   Endo/exonu/phosph_ase_sf
IPR005135   Endo/exonuclease/phosphatase
IPR000477   RT_dom
IPR036875   Znf_CCHC_sf

SUPFAM

SSF57567   SSF57567        + More
SSF56219   SSF56219
SSF57756   SSF57756

Gene 3D

3.60.10.10

ProteinModelPortal

H9JG79 A0A212EIV6 A0A2H1WF63 A0A2P8XUI0 A0A0J7K9V2 J9LES5 + More
K7JPM6

KEGG

105842324 no KO assigned | (RefSeq) uncharacterized LOC105842324

GO

GO:0008270 GO:0003676

Length:

506

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00371

outside

1 - 506

Pi

6.816315

Theta

17.34786

Tajima's D

-1.674818

CLR

0

CSRT

0.0404479776011199

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics

Multiple alignment of Orthologues

Gene Tree