SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO16537
Pre Gene Modal
BGIBMGA005562
Annotation
PREDICTED:_uncharacterized_protein_KIAA0195?_partial_[Bombyx_mori]
Location in the cell
PlasmaMembrane   Reliability : 4.05
 

Sequence

CDS
ATGGATGATAACAACGAAGAAATATTAGGCTATTCAACTAGACATGCTCTGATCAAATTACGCAACGACATTAGCGGCGTGATTGAAGAATATAAAAAGAAGATTCCCACTGGATTTCGCTTGGCACGTGATATTATTTCGTTTTCATCAGAGAAGGTTCTACTTTCGGGTGTTGCATACACAATTACATTGATTTACATAGTATGCCTATTATTAACATACCTATTTGGGGTCTCAGTACAGGCCCATGCATATCTGTTATGGGAGGCTTTTTTTCTATTAATCATATTAATAATTAACTTTTTGGTGGCATTTAACGAAGAATATTTATATCAAAATGAAATACCTCATAGAGTAAAAAAAGTGCTGGAAACAATGACTAACGCTATCAATAGAGTGAAATGGAAAGAAGAATATTATCCTCACCTATGTGCACCATATTCGCCGTGTGTAACTTTACAATGGACATACAGAGATGGTAACAAGATTTATTGA
Protein
MDDNNEEILGYSTRHALIKLRNDISGVIEEYKKKIPTGFRLARDIISFSSEKVLLSGVAYTITLIYIVCLLLTYLFGVSVQAHAYLLWEAFFLLIILIINFLVAFNEEYLYQNEIPHRVKKVLETMTNAINRVKWKEEYYPHLCAPYSPCVTLQWTYRDGNKIY

Summary

EMBL
BABH01020203    BABH01020204    BABH01020205    BABH01020206    NWSH01001832    PCG69963.1    + More
GDQN01002961    JAT88093.1    ODYU01006205    SOQ47850.1    RSAL01000090    RVE48102.1    KQ461155    KPJ08304.1    FP102340    CBH09281.1    KC469893    AGC92690.2    AGBW02013517    OWR43291.1    KQ459232    KPJ02629.1    GDQN01004645    JAT86409.1    GBYB01009583    JAG79350.1    GBYB01011032    JAG80799.1    GBYB01001767    JAG71534.1    GBYB01009580    JAG79347.1    GBYB01001768    JAG71535.1    KQ435834    KOX71551.1    APGK01022082    KB740398    ENN80731.1    GL445515    EFN89491.1    GBHO01045649    GBHO01026606    GBHO01021166    JAF97954.1    JAG16998.1    JAG22438.1    KB632255    ERL90630.1    KK854009    PTY09219.1    KQ976604    KYM79404.1    KQ979658    KYN19892.1    ADTU01020204    PYGN01000660    PSN42666.1    KQ981561    KYN39827.1    GDHC01006927    JAQ11702.1    GDHC01003801    JAQ14828.1    GDHC01007108    JAQ11521.1    GL888167    EGI66276.1    KZ288308    PBC28715.1    KK853134    KDR10862.1    GBBI01003783    JAC14929.1    KQ759847    OAD62585.1    KQ971361    EFA08800.1    GEDC01030912    GEDC01010908    JAS06386.1    JAS26390.1    GEDC01026348    JAS10950.1    GEDC01020970    GEDC01012123    JAS16328.1    JAS25175.1    GEDC01031434    GEDC01026722    JAS05864.1    JAS10576.1    GEDC01023274    GEDC01010258    JAS14024.1    JAS27040.1    GEDC01006317    JAS30981.1    GEDC01025148    JAS12150.1    GEDC01015412    JAS21886.1    GEDC01000814    JAS36484.1    GEDC01024062    GEDC01021433    JAS13236.1    JAS15865.1    GEDC01027521    JAS09777.1    GEDC01029363    GEDC01008363    JAS07935.1    JAS28935.1    JR040354    AEY59099.1    KQ414784    KOC61013.1    KK107238    EZA54621.1    QOIP01000007    RLU20670.1    GEZM01101564    GEZM01101559    GEZM01101557    JAV52545.1    GEZM01101544    JAV52589.1    GEZM01101577    GEZM01101572    GEZM01101571    GEZM01101563    GEZM01101562    GEZM01101561    GEZM01101555    GEZM01101554    GEZM01101552    GEZM01101543    GEZM01101542    JAV52531.1    GEZM01101574    JAV52505.1    GEZM01101579    GEZM01101578    GEZM01101575    GEZM01101568    GEZM01101560    GEZM01101558    GEZM01101551    GEZM01101550    GEZM01101548    GEZM01101546    GEZM01101541    GEZM01101540    JAV52604.1    GEZM01101545    JAV52588.1    GEZM01101567    GEZM01101556    JAV52523.1    GEZM01101576    GEZM01101573    GEZM01101570    GEZM01101569    GEZM01101566    GEZM01101565    GEZM01101553    GEZM01101549    GEZM01101547    JAV52508.1    NNAY01002685    OXU20778.1    GFDF01011093    JAV02991.1    LJIJ01000028    ODN05210.1    AJWK01027094    GGFK01004662    MBW37983.1    GDUN01000178    JAN95741.1    ATLV01003052    KE524109    KFB34903.1    GECU01035785    JAS71921.1    GECU01011423    JAS96283.1    AXCM01001247    GECU01032144    JAS75562.1    GECU01011041    JAS96665.1    GGFL01002892    MBW67070.1    ADMH02000938    ETN64626.1    GAKP01019871    JAC39081.1    GAKP01019870    JAC39082.1    GDHF01009982    JAI42332.1    AXCP01007583    GDHF01022193    JAI30121.1    GDHF01033916    JAI18398.1    GDHF01031513    JAI20801.1    GDHF01024534    GDHF01015083    JAI27780.1    JAI37231.1    GDHF01003346    JAI48968.1    JXUM01107644    JXUM01107645    JXUM01107646    KQ565160    KXJ71272.1    JXUM01084398    KQ563435    KXJ73833.1    GAMC01018440    JAB88115.1    GEBQ01025356    JAT14621.1    GAMC01018439    JAB88116.1    GBXI01002050    JAD12242.1    AXCN02001394    GBXI01006665    JAD07627.1   
Pfam
PF01027   Bax1-I        + More
PF00689   Cation_ATPase_C
Interpro
IPR039720   TMEM94        + More
IPR023299   ATPase_P-typ_cyto_dom_N       
IPR023298   ATPase_P-typ_TM_dom_sf       
IPR008250   ATPase_P-typ_transduc_dom_A_sf       
IPR006214   Bax_inhibitor_1-related       
IPR006068   ATPase_P-typ_cation-transptr_C       
IPR030473   IL6/GCSF/MGF_CS       
SUPFAM
SSF81660   SSF81660        + More
SSF81665   SSF81665       
SSF81653   SSF81653       
Gene 3D

Ontologies

Topology

Length:
164
Number of predicted TMHs:
2
Exp number of AAs in TMHs:
43.84717
Exp number, first 60 AAs:
6.28949
Total prob of N-in:
0.62702
inside
1  -  52
TMhelix
53  -  75
outside
76  -  84
TMhelix
85  -  104
inside
105  -  164
 
 

Population Genetic Test Statistics

Pi
3.425465
Theta
35.131031
Tajima's D
-0.773334
CLR
0
CSRT
0.179791010449478
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
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