Gene

KWMTBOMO16528

Annotation

PREDICTED:_thymidylate_kinase-like_[Papilio_xuthus]

Location

Bomo_Scaf007(-):44297-48145      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 2.353

CDS

ATGAAACGAGGTGCTTTAATAGTTATTGAAGGTATCGATAGAACAGGGAAGTCGACACAAGGGAAAATATTAGTTGAAAGCTTGAAAAAGCACAACATTGAAGCTGAATACAGAAATTTTCCTGCCCGTGAGACAGAAATTGGAAAAGTCATAAATAATTATCTATCTTCAAAGAATGAATTATCAGATGAAGCTATCCATCTACTATTTTCTGCGAACCGCTGGGAGCGAGCCCAAAATATAATAAAAACTTTAGAAGGAGGCACAACAATAGTGCTTGATAGATACTGTTACTCAGGTGTAGCCTTTTCAGCAGCAAAAGGTTTAGATCTGAACTGGTGCAAGTCTCCAGATGCTGGTTTGCCACAGCCAGACAAAGTTTTCTTTCTAACCATGCCTCTTGAAGCAGTTTTGAAAAGGAATGGTTTTGGGAACGAAAGATATGAAGTGGTAGATTTCCAAAAGAAAGTGTGGAATATTTATTCTAAATTGATAGAACCGAATTGGGACGTCCTGGATGCTAACAGAACAATGGACGCAATTCAAACAGATATTCTAAGCAAATCATTGGAGATCATAAAGGAGGCTGAAAATAGCCCCATAAAAAAAATATGGATTGAATCGTAA

Protein

MKRGALIVIEGIDRTGKSTQGKILVESLKKHNIEAEYRNFPARETEIGKVINNYLSSKNELSDEAIHLLFSANRWERAQNIIKTLEGGTTIVLDRYCYSGVAFSAAKGLDLNWCKSPDAGLPQPDKVFFLTMPLEAVLKRNGFGNERYEVVDFQKKVWNIYSKLIEPNWDVLDANRTMDAIQTDILSKSLEIIKEAENSPIKKIWIES

Uniprot

A0A2A4JCZ2   A0A2H1VL46   A0A0N1PFY9   A0A212EPA4   D0AB90   L7X3W4   + More
A0A194QSK5   R4ZGJ3   A0A0D2WR91   A0A1B6EN76   A0A182WMH5   A0A2P6VHI3   A0A182VNW9   A0A1B6LBU9   A0A182X8H1   Q7PPZ1   A0A182LGS4   A0A1B6M0Z6   A0A0L0G1C5   A0A182HNS4   A0A0L0H7G7   A0A182K819   E1Z8Z0   A0A182YBY4   A0A182S709   A0A182M4R4   A0A182RP36   A0A1B0CYK9   E4YHT7   A0A2R5GGP8   E4X489   Q17LP5   A0A2P6TY72   A0A1S4EY68   C3ZEC2   V4B0U3   A0A182IQX1   A0A067REX9   A0A1D2NBB1   A0A182Q2G2   W8C5G7   A0A1B6EFI8   A0A182NV10   A0A0F8ANZ3   A0A1Y1XTZ2   A0A1Y1ICV4   N6TSA6   A0A3B3REA8   A0A336K3L0   A0A210PQL2   A0A2P6N7R7   F6SK91   A0A1L8DXV4   A0A182TXI2   B3SBN8   A0A1I8N896   U4UH17   A0A336L6X4   A0A1D2A8Z6   A0A2G4SJV5   A0A1X0QMY3   A0A367K2B2   A0A3Q3AGQ9   A0A369S0L9   B0W5K5   A0A0P4WLI0   T2MH14   A0A1Q3EVR0   A7S8M7   A0A3B3WT71   A0A3P9PIK3   A0A3B3U8P7   A0A087YL14   A0A023F7Z7   A0A1Y2C173   A0A0A1XG45   A0A2H3YH15   A0A3Q3RY18   A9TG14   A0A238F9H8   A0A1S3BYU7   A0A2A3EH77   A0A367J764   A0A0T6BHV6   A0A2H3YGM4   A0A151MJV9   A0A2H3YGM8   A0A0K8VVF7   A0A2K1JMM8   M3ZNH6   A0A3B5LIS9   A0A0S7H0S9   A0A1S3BY65   A0A367K0M1   A0A0A1ND87   A0A1Y2GN55   H2TXQ6   A0A2T0FLV0   A0A3Q3GTF3   V5GJC1  

Pubmed

26354079    22118469    23674305    23678178    29178410    12364791    + More
20966253    20852019    25244985    21097902    17510324    18563158    23254933    24845553    27289101    24495485    25835551    24865297    23537049    29240929    28812685    29378020    12481130    15114417    18719581    25315136    27956601    29674435    30042472    24065732    17615350    25474469    25830018    23917264    18079367    22753475    22293439    29237241    23542700    21551351   

EMBL

NWSH01001832    PCG69967.1    ODYU01003152    SOQ41543.1    KQ459232    KQ459127    + More
KPJ02634.1    KPJ03781.1    AGBW02013517    OWR43287.1    FP102340    CBH09285.1    KC469893    AGC92695.1    KQ461155    KPJ08299.1    HF679134    CCU56373.1    KE346365    KJE93668.1    GECZ01030404    JAS39365.1    LHPF02000006    PSC73553.1    GEBQ01018826    GEBQ01010692    JAT21151.1    JAT29285.1    AAAB01008900    EAA09514.4    GEBQ01018403    GEBQ01010417    JAT21574.1    JAT29560.1    KQ241912    KNC82591.1    APCN01002756    KQ257465    KNC97162.1    GL433839    EFN57425.1    AXCM01019387    AJVK01001967    FN654580    CBY35059.1    BEYU01000065    GBG29775.1    FN653024    CBY23878.1    CH477213    EAT47657.1    LHPG02000004    PRW59003.1    GG666612    EEN49078.1    KB200639    ESP00866.1    KK852730    KDR17511.1    LJIJ01000107    ODN02539.1    AXCN02001010    GAMC01004884    JAC01672.1    GEDC01000601    JAS36697.1    KQ041311    KKF28478.1    MCFE01000465    ORX89231.1    DF237404    GAQ88740.1    APGK01056917    KB741277    ENN71201.1    UFQS01000086    UFQT01000086    SSW99077.1    SSX19459.1    NEDP02005555    OWF38767.1    MDYQ01000164    PRP79990.1    GFDF01002845    JAV11239.1    DS985265    EDV19916.1    KB632155    ERL89190.1    UFQS01001813    UFQT01001813    SSX12427.1    SSX31878.1    GDKF01002942    JAT75680.1    KZ303860    PHZ09041.1    KV922185    ORE01091.1    PJQM01002325    RCH96297.1    NOWV01000129    RDD39593.1    DS231843    EDS35488.1    GDRN01063553    GDRN01063552    GDRN01063551    GDRN01063550    GDRN01063549    JAI64965.1    HAAD01004978    CDG71210.1    GFDL01015650    JAV19395.1    DS469598    EDO39969.1    AYCK01022117    GBBI01001330    JAC17382.1    MCGR01000140    ORY40627.1    GBXI01003943    JAD10349.1    DS545112    EDQ57588.1    FMSP01000004    SCV69409.1    KZ288256    PBC30569.1    PJQL01002009    RCH85812.1    LJIG01000040    KRT86900.1    AKHW03006003    KYO24806.1    GDHF01009452    JAI42862.1    ABEU02000013    PNR42792.1    GBYX01446682    GBYX01446681    JAO34764.1    PJQL01000436    RCH95736.1    CDGI01000245    KV921263    CEI94785.1    ORE22844.1    MCFF01000022    ORZ13930.1    NDIQ01000022    PRT55973.1    GALX01006754    JAB61712.1   

Proteomes

UP000218220    UP000053268    UP000007151    UP000053240    UP000014926    UP000008743    + More
UP000075920    UP000239649    UP000075903    UP000076407    UP000007062    UP000075882    UP000054560    UP000075840    UP000053201    UP000075881    UP000008141    UP000076408    UP000075901    UP000075883    UP000075900    UP000092462    UP000008820    UP000239899    UP000001554    UP000030746    UP000075880    UP000027135    UP000094527    UP000075886    UP000075884    UP000193498    UP000054558    UP000019118    UP000261540    UP000242188    UP000241769    UP000008144    UP000075902    UP000009022    UP000095301    UP000030742    UP000242254    UP000242414    UP000253551    UP000264800    UP000253843    UP000002320    UP000001593    UP000261480    UP000242638    UP000261500    UP000028760    UP000193467    UP000228380    UP000261640    UP000198372    UP000089565    UP000242457    UP000252139    UP000050525    UP000006727    UP000002852    UP000261380    UP000038169    UP000242381    UP000193648    UP000005226    UP000238350    UP000261660   

Pfam

PF02223   Thymidylate_kin

Interpro

IPR027417   P-loop_NTPase        + More
IPR018094   Thymidylate_kinase       
IPR039430   Thymidylate_kin-like_dom       
IPR018095   Thymidylate_kin_CS       

SUPFAM

SSF52540   SSF52540       

ProteinModelPortal

A0A2A4JCZ2   A0A2H1VL46   A0A0N1PFY9   A0A212EPA4   D0AB90   L7X3W4   + More
A0A194QSK5   R4ZGJ3   A0A0D2WR91   A0A1B6EN76   A0A182WMH5   A0A2P6VHI3   A0A182VNW9   A0A1B6LBU9   A0A182X8H1   Q7PPZ1   A0A182LGS4   A0A1B6M0Z6   A0A0L0G1C5   A0A182HNS4   A0A0L0H7G7   A0A182K819   E1Z8Z0   A0A182YBY4   A0A182S709   A0A182M4R4   A0A182RP36   A0A1B0CYK9   E4YHT7   A0A2R5GGP8   E4X489   Q17LP5   A0A2P6TY72   A0A1S4EY68   C3ZEC2   V4B0U3   A0A182IQX1   A0A067REX9   A0A1D2NBB1   A0A182Q2G2   W8C5G7   A0A1B6EFI8   A0A182NV10   A0A0F8ANZ3   A0A1Y1XTZ2   A0A1Y1ICV4   N6TSA6   A0A3B3REA8   A0A336K3L0   A0A210PQL2   A0A2P6N7R7   F6SK91   A0A1L8DXV4   A0A182TXI2   B3SBN8   A0A1I8N896   U4UH17   A0A336L6X4   A0A1D2A8Z6   A0A2G4SJV5   A0A1X0QMY3   A0A367K2B2   A0A3Q3AGQ9   A0A369S0L9   B0W5K5   A0A0P4WLI0   T2MH14   A0A1Q3EVR0   A7S8M7   A0A3B3WT71   A0A3P9PIK3   A0A3B3U8P7   A0A087YL14   A0A023F7Z7   A0A1Y2C173   A0A0A1XG45   A0A2H3YH15   A0A3Q3RY18   A9TG14   A0A238F9H8   A0A1S3BYU7   A0A2A3EH77   A0A367J764   A0A0T6BHV6   A0A2H3YGM4   A0A151MJV9   A0A2H3YGM8   A0A0K8VVF7   A0A2K1JMM8   M3ZNH6   A0A3B5LIS9   A0A0S7H0S9   A0A1S3BY65   A0A367K0M1   A0A0A1ND87   A0A1Y2GN55   H2TXQ6   A0A2T0FLV0   A0A3Q3GTF3   V5GJC1  

PDB

2XX3     E-value=2.37377e-51,     Score=507

KEGG

101743578    K00943 dTMP kinase [EC:2.7.4.9] | (RefSeq) thymidylate kinase

PATHWAY

00240    Pyrimidine metabolism - Bombyx mori (domestic silkworm)
01100    Metabolic pathways - Bombyx mori (domestic silkworm)

GO

GO:0004798   GO:0006233   GO:0005524   GO:0006235   GO:0006227   GO:0005634   GO:0005739   GO:0009041   GO:0005829   GO:0005737   GO:0004550   GO:0006470   GO:0008138   GO:0016491   GO:0016651   GO:0046835   GO:0006281   GO:0006259  

Length:

208

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00129

Exp number, first 60 AAs:

0

Total prob of N-in:

0.07019

outside

1  -  208

 

 

Pi

4.306065

Theta

14.069207

Tajima's D

-2.000378

CLR

0

CSRT

0.0138493075346233

Interpretation

Uncertain