Gene

KWMTBOMO16527  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA005637

Annotation

putative_penguin_[Heliconius_melpomene]

Location

Bomo_Scaf007(+):34296-42976      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 3.629

CDS

ATGCAGAAAGGTAAAAGGAAAAGTGATGAAGATGGTGTTAGTTCACCAAAAAAGAAAAAACTAAATAGTTCGCAAACAACAGTTCGCAAAGAACAAGATAGTAAAATTAAAAACATCAAAAACAAAACAAACCTAAAAGGTAAAAAAAATAATAAGGATGGATTAAAAGGTTTCAAAAAATTTACTAAAAACGACAAAGGATCTAAATTTGTTAAAACAAAAGAAAAATCGAATTTTTCTAAAGATGAAGCAAACGGAGAAAAGCCAAAATGGGCTGAAATGAAAAAAGAGAAAAAACAATTAAGGACTGTAAGACGTAAAGCTAAAATAACAGCTGAAGTATTTGAGATTTCACATAAGGCCAAGTTGTTAGCAGCACAAATACAGAGAAAAGTTGTGAAATCTGACTTCAAAATAAACTCCTGTAAAGAATTGCACAATATGTTAAAGGGACAATACAAGTCTATTGCTCTCACTCATGATCTCAGTCGAGTTATTCAAGTTCTACTAAAACATAGCCCTGAAGACATTATAAATGAAATAACGAAAGAGCTTCTAGACATTATAGTACAGATGGGTCAATCTAAGTATGCGCATCATTCCGTTAAGCGAATACTGAAATATGGAACAGATTTCATTAGGCATGAGGTTTTGAAGAAGTTTTATGGACATGTTGTATCCCTGTCAACTCATGCTATTAGTGCACCTGTCTTGGATTATGCATATGGGGAGTTTGCCTCGAAAAAGGAAAAATGCCACATGCAACAAGAATTCTATGGAGAGATTTATAAGAATACAAAAGACGACAAGGTAAAGACACTCAGAGATGCATACAAAGACAGTCCAGAAATGAAATCAGCTATACTCCAGGCCTGTAAGGCCAACTTACAGAAGATATTAGACAAAAACCTACATGATGGAGAATTGTTTCATTCTGTGTTATATGACTATATCTGTGAATGCAGCCAAGAAGATAGAGTAGATTTTATTTCTATTCTTAGCCCACTGATTGTCCCACTCAGTAATTCTTTACCTGGTGTCAATGCTGCCAGTATGTGTGTTTGGCAGGGTACAAATAAGGACAAGAAAACAATTTTAAAAGTGGTCAAGGAACATGCTATTCCTTTAAGTAAACATAAGACTGGATACCGCCTTCTGATTGCTATTTTTGACTCTGTTGACGATACTGTTCTTGTCAAGAAGACTATTGTGTCCACTCTGGCTGCCAATATAAAAGACATTGCTAAGGACCACTGGGGTAATATGGTAATTCACTGGTTAGTAAAACCAAAAGACACAGCTGCTTTCCATCCTTGTTTAATTAAGTTTTTGGAAGATGGTGCTAAGAGTGGAACATCGAAGAAAGACACAGAAATTCGTGTTTCGGAGCTTAGGGAAGCTATATTACCTGCTCTAAAGAAAGATATGGAAACAGATCCTAAATTCTGGCTAAGCAATAAATCTAATATGTTGTTGGCTGTTGCTGTATTGTCTATAGAATCATCTAAAGAGATTCTGCATGCATTGGCAAAAGTGATCTGCGAGACTGACTGGCACATGCAGGTGGAAGGGAAGGACGATACCCTGGCGATTGAGGATGCTGGTATACACATGTGCTTAAAAAAACTAGCCAGTTTAGACAAAGAAAAATCGGCTGATACTCTTGGTGAAGCTATAAGTGAACATTTAAATGATGAAACTATTAAAGTGTGGATACGTACAAATAGGGGTTGCTTTTTCCTATTGAAATTGATAGAGAGTAATAGTGAAGAAGTAGATAAGAAATTAAAGGCAAAATTAAAACCACATGTAAATATTTTGAAGCAACAATCATCGGAAGGTGCTAAATTATTGTTACAGAATGTACAGAATAAATAG

Protein

MQKGKRKSDEDGVSSPKKKKLNSSQTTVRKEQDSKIKNIKNKTNLKGKKNNKDGLKGFKKFTKNDKGSKFVKTKEKSNFSKDEANGEKPKWAEMKKEKKQLRTVRRKAKITAEVFEISHKAKLLAAQIQRKVVKSDFKINSCKELHNMLKGQYKSIALTHDLSRVIQVLLKHSPEDIINEITKELLDIIVQMGQSKYAHHSVKRILKYGTDFIRHEVLKKFYGHVVSLSTHAISAPVLDYAYGEFASKKEKCHMQQEFYGEIYKNTKDDKVKTLRDAYKDSPEMKSAILQACKANLQKILDKNLHDGELFHSVLYDYICECSQEDRVDFISILSPLIVPLSNSLPGVNAASMCVWQGTNKDKKTILKVVKEHAIPLSKHKTGYRLLIAIFDSVDDTVLVKKTIVSTLAANIKDIAKDHWGNMVIHWLVKPKDTAAFHPCLIKFLEDGAKSGTSKKDTEIRVSELREAILPALKKDMETDPKFWLSNKSNMLLAVAVLSIESSKEILHALAKVICETDWHMQVEGKDDTLAIEDAGIHMCLKKLASLDKEKSADTLGEAISEHLNDETIKVWIRTNRGCFFLLKLIESNSEEVDKKLKAKLKPHVNILKQQSSEGAKLLLQNVQNK

Uniprot

A0A2A4JDV9   A0A2H1VM78   A0A194QAR9   A0A194QTH1   D0AB89   L7X0R1   + More
S4PGK9   A0A212EP73   A0A0L7LL06   D6WZ15   N6U5R4   A0A0T6B3C6   A0A1Y1MBF6   A0A232EX65   K7J9N0   E2BXL1   A0A088ALU9   A0A154PGZ6   A0A0J7K4J0   E9IFM9   A0A2P8XS97   E2A7S4   A0A026W9A4   A0A3L8DD65   A0A195DCV3   A0A195BCC0   A0A158NS35   A0A2J7QKP0   A0A0K8USZ1   F4WJT7   A0A195FXT3   A0A151WGY7   U5EHI9   A0A067QIM4   A0A1A9WZ92   A0A3L8DD77   W8BH01   A0A1B0AIX9   A0A336MJ44   A0A336MGJ9   A0A195BYX8   A0A1A9UHS6   A0A1B0D4D4   A0A1L8DGJ9   A0A1J1J034   A0A182H6R2   A0A1B0CMH0   A0A182X8S7   A0A182K363   A0A3Q0IPH3   A0A084VJS3   A0A2M4AJN3   A0A182L6U1   A0A182PAK3   A0A2M4AJE2   A0A2M3Z396   A0A1S4FNX6   A0A182F8N9   A0A2M3Z3B7   A0A182IVV3   A0A2M4AJW9   Q16UF7   A0A182UXD4   A0A182TG74   A0A2T7NPQ9   A0A2M4BGH9   A0A182LW26   A0A1S3JC21   A0A1S3JCA0   Q7QAB5   A0A1S3K9S0   A0A2C9JHF8   B4NCP2   A0A182ID10   A0A182XWT0   A0A182R5P3   A0A182N5H7   A0A2R7VX35   E9G064   A0A0P5W3J1  

Pubmed

26354079    23674305    23622113    22118469    26227816    18362917    + More
19820115    23537049    28004739    28648823    20075255    20798317    21282665    29403074    24508170    30249741    21347285    21719571    24845553    24495485    26483478    24438588    20966253    17510324    12364791    14747013    17210077    15562597    17994087    25244985    21292972   

EMBL

NWSH01001832    PCG69966.1    ODYU01003152    SOQ41542.1    KQ459232    KPJ02633.1    + More
KQ461155    KPJ08300.1    FP102340    CBH09284.1    KC469893    AGC92694.1    GAIX01003617    JAA88943.1    AGBW02013517    OWR43288.1    JTDY01000686    KOB76223.1    KQ971363    EFA09038.1    APGK01041594    KB740994    KB632255    ENN75986.1    ERL90654.1    LJIG01016117    KRT81565.1    GEZM01035601    JAV83159.1    NNAY01001792    OXU22907.1    AAZX01002711    GL451265    EFN79580.1    KQ434896    KZC10744.1    LBMM01014327    KMQ85219.1    GL762880    EFZ20617.1    PYGN01001432    PSN34880.1    GL437382    EFN70542.1    KK107374    EZA51594.1    QOIP01000010    RLU18102.1    KQ980989    KYN10708.1    KQ976528    KYM81867.1    ADTU01024454    NEVH01013260    PNF29156.1    GDHF01022839    JAI29475.1    GL888186    EGI65579.1    KQ981208    KYN44654.1    KQ983136    KYQ47082.1    GANO01003004    JAB56867.1    KK853308    KDR08684.1    RLU18103.1    GAMC01010297    GAMC01010295    JAB96258.1    UFQT01001201    SSX29481.1    UFQT01001175    SSX29325.1    KQ978457    KYM93817.1    AJVK01011378    AJVK01011379    GFDF01008496    JAV05588.1    CVRI01000066    CRL05875.1    JXUM01114779    JXUM01114780    JXUM01114781    JXUM01114782    JXUM01114783    JXUM01114784    KQ565817    KXJ70629.1    AJWK01018717    ATLV01013862    KE524905    KFB38217.1    GGFK01007636    MBW40957.1    GGFK01007598    MBW40919.1    GGFM01002212    MBW22963.1    GGFM01002187    MBW22938.1    GGFK01007750    MBW41071.1    CH477622    EAT38180.1    PZQS01000010    PVD23157.1    GGFJ01002986    MBW52127.1    AXCM01006361    AAAB01008898    EAA09186.4    CH964239    EDW82601.2    APCN01004963    KK854135    PTY11899.1    GL732528    EFX87453.1    GDIP01092481    JAM11234.1   

Proteomes

UP000218220    UP000053268    UP000053240    UP000007151    UP000037510    UP000007266    + More
UP000019118    UP000030742    UP000215335    UP000002358    UP000008237    UP000005203    UP000076502    UP000036403    UP000245037    UP000000311    UP000053097    UP000279307    UP000078492    UP000078540    UP000005205    UP000235965    UP000007755    UP000078541    UP000075809    UP000027135    UP000091820    UP000092445    UP000078542    UP000078200    UP000092462    UP000183832    UP000069940    UP000249989    UP000092461    UP000076407    UP000075881    UP000079169    UP000030765    UP000075882    UP000075885    UP000069272    UP000075880    UP000008820    UP000075903    UP000075902    UP000245119    UP000075883    UP000085678    UP000007062    UP000076420    UP000007798    UP000075840    UP000076408    UP000075900    UP000075884    UP000000305   

Pfam

PF08144   CPL

Interpro

IPR040059   PUM3        + More
IPR016024   ARM-type_fold       
IPR001313   Pumilio_RNA-bd_rpt       
IPR012959   CPL_dom       
IPR011989   ARM-like       
IPR033133   PUM-HD       

SUPFAM

SSF48371   SSF48371       

Gene 3D

1.25.10.10    

ProteinModelPortal

A0A2A4JDV9   A0A2H1VM78   A0A194QAR9   A0A194QTH1   D0AB89   L7X0R1   + More
S4PGK9   A0A212EP73   A0A0L7LL06   D6WZ15   N6U5R4   A0A0T6B3C6   A0A1Y1MBF6   A0A232EX65   K7J9N0   E2BXL1   A0A088ALU9   A0A154PGZ6   A0A0J7K4J0   E9IFM9   A0A2P8XS97   E2A7S4   A0A026W9A4   A0A3L8DD65   A0A195DCV3   A0A195BCC0   A0A158NS35   A0A2J7QKP0   A0A0K8USZ1   F4WJT7   A0A195FXT3   A0A151WGY7   U5EHI9   A0A067QIM4   A0A1A9WZ92   A0A3L8DD77   W8BH01   A0A1B0AIX9   A0A336MJ44   A0A336MGJ9   A0A195BYX8   A0A1A9UHS6   A0A1B0D4D4   A0A1L8DGJ9   A0A1J1J034   A0A182H6R2   A0A1B0CMH0   A0A182X8S7   A0A182K363   A0A3Q0IPH3   A0A084VJS3   A0A2M4AJN3   A0A182L6U1   A0A182PAK3   A0A2M4AJE2   A0A2M3Z396   A0A1S4FNX6   A0A182F8N9   A0A2M3Z3B7   A0A182IVV3   A0A2M4AJW9   Q16UF7   A0A182UXD4   A0A182TG74   A0A2T7NPQ9   A0A2M4BGH9   A0A182LW26   A0A1S3JC21   A0A1S3JCA0   Q7QAB5   A0A1S3K9S0   A0A2C9JHF8   B4NCP2   A0A182ID10   A0A182XWT0   A0A182R5P3   A0A182N5H7   A0A2R7VX35   E9G064   A0A0P5W3J1  

PDB

4WZW     E-value=3.83217e-50,     Score=502

KEGG

101743438    K14844 pumilio homology domain family member 6 | (RefSeq) protein penguin

GO

GO:0003723   GO:0005730   GO:0005488   GO:0016459   GO:0006470   GO:0008138   GO:0016491   GO:0016651   GO:0046835   GO:0006281   GO:0006259  

PANTHER

PTHR13389  

Length:

625

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.14368

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00960

outside

1  -  625

 

 

Pi

2.314358

Theta

23.462693

Tajima's D

-1.321643

CLR

0.003159

CSRT

0.0837458127093645

Interpretation

Uncertain