Gene

KWMTBOMO16526

Annotation

PREDICTED:_INO80_complex_subunit_C_[Amyelois_transitella]

Location

Bomo_Scaf007(-):24905-25585      View in EpiBrowser

Location in the cell

Mitochondrial   Reliability : 3.502

CDS

ATGTCTAATGAATTAGAGAAATATTATTGTTTCAAGAGAGAAAACAAATTCATTGTAAAAAGTGGATCTAAAAAACGTATGTGGAGATCTTTAAAACAAATCTTAACAGCCGATCGAGCATTACCATGGCCAAATGAAGCAGTTTTATATTATTCAATAAATGCTCCGCCAACATTCAAACCTATTAAAAAATATTCAGACATATCAGGATTACCAGCACCATATATGGATAGACACTCAAAACTTTATTTTTCTAATGCTGAAGAATTTGCAACAGTCAGGAACCTTCCAATGGACATAACAGCAGGATATTTACAACTCAGAGGAGCAAACACTATCGTGGGATAA

Protein

MSNELEKYYCFKRENKFIVKSGSKKRMWRSLKQILTADRALPWPNEAVLYYSINAPPTFKPIKKYSDISGLPAPYMDRHSKLYFSNAEEFATVRNLPMDITAGYLQLRGANTIVG

Uniprot

A0A2A4ISE2   S4PPK9   L7X1P5   A0A2H1VL66   D0AB93   A0A1E1WTB0   + More
A0A194QXJ5   A0A194QAZ5   H9J7S3   A0A212EP79   A0A154PBW8   A0A0K8TRM9   A0A0C9RK32   A0A0M8ZPT4   A0A0L7RDE6   A0A151IGU5   A0A232EQH8   A0A1L8DWG2   A0A158P345   E2AJK9   A0A151WFC5   A0A0J7KM36   A0A026WE77   E2BX55   A0A195BD12   F4WM73   A0A1B0ETW9   A0A195F3U5   A0A088ARQ6   A0A1Q3F8F2   B0W4J6   D6WC71   A0A1W4WB91   A0A1B0D5B6   A0A1B6DG18   A0A2A3E475   A0A0L0C1P4   A0A182H8P8   A0A1I8MEC0   A0A182U5L9   A0A182XFX3   A0NF19   A0A182IC58   Q17K42   A0A1Y1M3W8   A0A084WH65   U5EQC1   A0A2M4AXN5   T1GQ28   U4UG07   A0A1B6L365   A0A195DCF2   E9IEY2   A0A182F3G6   A0A2M4C3W4   A0A182RDS1   A0A2M4AQ96   A0A1B6G3S4   W5JTV3   A0A182YDT7   A0A182W6F1   W8C1P4   A0A2M3ZDN0   A0A182J0F7   A0A182NU04   A0A182QE30   A0A1A9W949   A0A2H8TS43   R4G879   A0A069DVU3   A0A023F9E0   N6UIN1   E0VXT3   T1HFC8   C4WS16   A0A224Y2Z0   A0A0P4VP97   A0A182PLS1   A0A1B0APP8   A0A1A9XXS7   S4RGB8   A0A0P4W6U2   A0A0K8V9R4   A0A067R655   A0A182K1H7   A0A1I8PPF9   A0A0K8SIZ7   A0A0A9Y6K6   A0A0V0GCH2   A0A093H4D1   A0A1A9VBL6   A0A091TRD2   A0A2P4T5K2   R0JIC3   A0A093HLA8   G1N4F7   A0A091NYD1   A0A093FSI6   A0A099ZDC5   A0A1A9Z5V1  

Pubmed

23622113    23674305    26354079    19121390    22118469    26369729    + More
28648823    21347285    20798317    24508170    30249741    21719571    18362917    19820115    26108605    26483478    25315136    12364791    14747013    17210077    17510324    28004739    24438588    23537049    21282665    20920257    23761445    25244985    24495485    26334808    25474469    20566863    27129103    24845553    25401762    20838655   

EMBL

NWSH01007563    PCG62907.1    GAIX01000187    JAA92373.1    KC469893    AGC92698.1    + More
ODYU01003152    SOQ41546.1    FP102340    CBH09288.1    GDQN01001013    JAT90041.1    KQ461155    KPJ08296.1    KQ459232    KPJ02637.1    BABH01020197    AGBW02013517    OWR43284.1    KQ434856    KZC08700.1    GDAI01001028    JAI16575.1    GBYB01008570    JAG78337.1    KQ438551    KOX67173.1    KQ414614    KOC68825.1    KQ977726    KYN00293.1    NNAY01002764    OXU20613.1    GFDF01003304    JAV10780.1    ADTU01001303    GL440027    EFN66404.1    KQ983219    KYQ46534.1    LBMM01005677    KMQ91296.1    KK107293    QOIP01000005    EZA53334.1    RLU23076.1    GL451202    EFN79774.1    KQ976522    KYM82084.1    GL888217    EGI64717.1    AJWK01010437    KQ981855    KYN34754.1    GFDL01011236    JAV23809.1    DS231838    EDS33841.1    KQ971316    EEZ98770.1    AJVK01011728    GEDC01012681    JAS24617.1    KZ288427    PBC25881.1    JRES01001123    KNC25339.1    JXUM01118902    KQ566235    KXJ70297.1    AAAB01008964    EAU76314.1    APCN01000775    CH477228    EAT47050.1    GEZM01041321    GEZM01041320    JAV80512.1    ATLV01023791    KE525346    KFB49559.1    GANO01004321    JAB55550.1    GGFK01012248    MBW45569.1    CAQQ02031859    KB632308    ERL91957.1    GEBQ01021849    JAT18128.1    KQ980989    KYN10563.1    GL762728    EFZ20875.1    GGFJ01010876    MBW60017.1    GGFK01009633    MBW42954.1    GECZ01012680    JAS57089.1    ADMH02000463    ETN66380.1    GAMC01000824    GAMC01000823    JAC05733.1    GGFM01005840    MBW26591.1    AXCN02000808    GFXV01005220    MBW17025.1    GAHY01001442    JAA76068.1    GBGD01003475    JAC85414.1    GBBI01000596    JAC18116.1    APGK01023763    KB740512    ENN80511.1    DS235840    EEB18189.1    ACPB03021649    ABLF02029934    AK340009    BAH70686.1    GFTR01001555    JAW14871.1    GDKW01002296    JAI54299.1    JXJN01001542    GDRN01067655    JAI64337.1    GDHF01016746    JAI35568.1    KK852675    KDR18718.1    GBRD01013057    GBRD01013056    JAG52770.1    GBHO01016323    GBHO01016322    JAG27281.1    JAG27282.1    GECL01000201    JAP05923.1    KL205937    KFV77423.1    KK463913    KFQ80703.1    PPHD01008162    POI31604.1    KB743886    EOA96751.1    KK630440    KFV55388.1    KK644595    KFP98056.1    KK400496    KFV59645.1    KL893134    KGL80414.1   

Proteomes

UP000218220    UP000053240    UP000053268    UP000005204    UP000007151    UP000076502    + More
UP000053105    UP000053825    UP000078542    UP000215335    UP000005205    UP000000311    UP000075809    UP000036403    UP000053097    UP000279307    UP000008237    UP000078540    UP000007755    UP000092461    UP000078541    UP000005203    UP000002320    UP000007266    UP000192223    UP000092462    UP000242457    UP000037069    UP000069940    UP000249989    UP000095301    UP000075902    UP000076407    UP000007062    UP000075840    UP000008820    UP000030765    UP000015102    UP000030742    UP000078492    UP000069272    UP000075900    UP000000673    UP000076408    UP000075920    UP000075880    UP000075884    UP000075886    UP000091820    UP000019118    UP000009046    UP000015103    UP000007819    UP000075885    UP000092460    UP000092443    UP000245300    UP000027135    UP000075881    UP000095300    UP000053584    UP000078200    UP000001645    UP000053641    UP000092445   

PRIDE

H9J7S3   

Pfam

PF08265   YL1_C        + More
PF04157   EAP30
PF16087   DUF4817

Interpro

IPR013272   Vps72/YL1_C        + More
IPR029525   INO80C/Ies6       
IPR036390   WH_DNA-bd_sf       
IPR036388   WH-like_DNA-bd_sf       
IPR040608   Snf8/Vps36       
IPR037855   Vps36       
IPR032135   DUF4817       

SUPFAM

SSF46785   SSF46785       

Gene 3D

1.10.10.10    

ProteinModelPortal

A0A2A4ISE2   S4PPK9   L7X1P5   A0A2H1VL66   D0AB93   A0A1E1WTB0   + More
A0A194QXJ5   A0A194QAZ5   H9J7S3   A0A212EP79   A0A154PBW8   A0A0K8TRM9   A0A0C9RK32   A0A0M8ZPT4   A0A0L7RDE6   A0A151IGU5   A0A232EQH8   A0A1L8DWG2   A0A158P345   E2AJK9   A0A151WFC5   A0A0J7KM36   A0A026WE77   E2BX55   A0A195BD12   F4WM73   A0A1B0ETW9   A0A195F3U5   A0A088ARQ6   A0A1Q3F8F2   B0W4J6   D6WC71   A0A1W4WB91   A0A1B0D5B6   A0A1B6DG18   A0A2A3E475   A0A0L0C1P4   A0A182H8P8   A0A1I8MEC0   A0A182U5L9   A0A182XFX3   A0NF19   A0A182IC58   Q17K42   A0A1Y1M3W8   A0A084WH65   U5EQC1   A0A2M4AXN5   T1GQ28   U4UG07   A0A1B6L365   A0A195DCF2   E9IEY2   A0A182F3G6   A0A2M4C3W4   A0A182RDS1   A0A2M4AQ96   A0A1B6G3S4   W5JTV3   A0A182YDT7   A0A182W6F1   W8C1P4   A0A2M3ZDN0   A0A182J0F7   A0A182NU04   A0A182QE30   A0A1A9W949   A0A2H8TS43   R4G879   A0A069DVU3   A0A023F9E0   N6UIN1   E0VXT3   T1HFC8   C4WS16   A0A224Y2Z0   A0A0P4VP97   A0A182PLS1   A0A1B0APP8   A0A1A9XXS7   S4RGB8   A0A0P4W6U2   A0A0K8V9R4   A0A067R655   A0A182K1H7   A0A1I8PPF9   A0A0K8SIZ7   A0A0A9Y6K6   A0A0V0GCH2   A0A093H4D1   A0A1A9VBL6   A0A091TRD2   A0A2P4T5K2   R0JIC3   A0A093HLA8   G1N4F7   A0A091NYD1   A0A093FSI6   A0A099ZDC5   A0A1A9Z5V1  

PDB

6FML     E-value=8.16151e-12,     Score=163

KEGG

101743297    K11667 INO80 complex subunit C | (RefSeq) INO80 complex subunit C

GO

GO:0006338   GO:0031011   GO:0032509   GO:0000814   GO:0043130   GO:0001650   GO:0071339  

PANTHER

PTHR31200   PTHR13128  

Length:

115

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00369

Exp number, first 60 AAs:

0.00204

Total prob of N-in:

0.33801

outside

1  -  115

 

 

Pi

16.071147

Theta

20.170462

Tajima's D

-0.618374

CLR

0

CSRT

0.212689365531723

Interpretation

Uncertain