Gene

KWMTBOMO16520  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA014051

Annotation

PREDICTED:_programmed_cell_death_protein_4-like_[Bombyx_mori]

Location

Bomo_Scaf006(+):63746-73970      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 2.447

CDS

ATGTTACAGCGTAAATCCGAGCCTGTGATATTAGAGTATTTTGAGCATGGAGACACGAACGCGGCCGCCGAGGAGTTCCTAGACTTTGTGACGGCGGCGAGGAGTCATCTGGTGTGCGAGACAATTGTGGAGATAGCGTTGGATCACAAGGCGATGCACTGCGAAATGGCCTCGGTCCTCATATCCGATCTGTATGGAAGAGTTTTTTCAGCCAAAGACATCGGCTACGCGTTCGAGCGTCTGCTGGAGAAGCTGCCGGACCTGGTGCTGGACACGCCGGACGCGGCGCTGCTGCTGTCCAACTTCATAGCGCGCTGCGTGGCCGACGACTGCCTGCCGCCGCGCTTCGTGCAGGCGCAGGCCGCCGCCGCGCTCTCCGCGCCCGCCAGACAAGCTATACACAGAGCTGAGACTCTACTGTCTATGAAGCAAGGGCTAGTGAGGCTGGACAACATATGGGGCGTCGGCGGAGGTATCAGGCCGGTCAAGTCTCTCATCCGTCAGATCCAGTTGCTGCTGAAGGAGTACCTGACGTCGGGTGAGCTCGCGGAGGCGATGCGCTGCGTGCGGGAGTTGGAGGTTCCTCACTTCCACCACGAGCTGGTCTACGAGACAATACTCCTGGCTTTGGAGACCATAAATTCTGGTGTTGAAGAACAGCTTTGTACTTTCCTGGCTGAGTTGCGGAGGTGCTGTATAGTCACGCCCGACCAAATGGATAGGGGCTTCATCCGCGTGCTCGAGGATATGAATGATATCGTCCTGGACGTGCCTCTCGCTTACATCATGCTGGACAGGTTCTTGGAGCGGTGCCAGACGAGGTTCAGGCTCGGGGACAACGTGCTGAAGCGAGTGCCGACCAGAGGTCGCAAGCGCTTCGTGTCCGAAGGAGACGGAGGCGCCATCAAGGATCACGCGCTGAAGCTGCGCGAGTGA

Protein

MLQRKSEPVILEYFEHGDTNAAAEEFLDFVTAARSHLVCETIVEIALDHKAMHCEMASVLISDLYGRVFSAKDIGYAFERLLEKLPDLVLDTPDAALLLSNFIARCVADDCLPPRFVQAQAAAALSAPARQAIHRAETLLSMKQGLVRLDNIWGVGGGIRPVKSLIRQIQLLLKEYLTSGELAEAMRCVRELEVPHFHHELVYETILLALETINSGVEEQLCTFLAELRRCCIVTPDQMDRGFIRVLEDMNDIVLDVPLAYIMLDRFLERCQTRFRLGDNVLKRVPTRGRKRFVSEGDGGAIKDHALKLRE

Uniprot

A0A1E1W475   A0A212FIK6   S4PC15   A0A2A4K7K2   A0A2H1V8V6   A0A0N0PAF5   + More
A0A0N1PG73   A0A212F461   A0A067QIK1   A0A2J7QSG0   A0A0L7L1Q6   A0A1B6D254   A0A170Z2Q9   A0A0V0G3E2   A0A069DZ08   A0A1I8PVG0   A0A224XGH1   A0A1B6FUN2   A0A1B6LV66   A0A0K8TJ43   A0A0A9WWJ2   A0A1I8MS75   A0A0K8TJP3   T1PCP1   A0A034VEW0   A0A0K8VCS3   A0A1W4WT55   A0A0T6B278   A0A0L0C0V7   W8AY20   D3TLD2   A0A0A1WK73   A0A0P4VUE5   R4FPP6   T1I1S7   A0A1L8DLU4   A0A2J7QSH6   D6WCT0   A0A139WNU3   A0A023ESW1   A0A139WNA9   Q178N5   A0A1S4FBU7   U5ER32   A0A0P9AB19   A0A0K8TR71   B3MW12   A0A1Y1K444   A0A182YCV3   B4JL70   B4N1Z3   A0A3B0J7L6   B4L2D8   A0A0M4F8Y5   A0A1Q3F496   B4M1I6   B4Q2F7   B5DM27   E0VG43   A0A1W4VGL6   B4GY82   A0A1Q3F416   A0A1Q3F435   A0A1Q3F450   B0X887   A0A1Q3F498   B3NVZ4   A0A0A9WN83   A0A3R7NZL3   A0A0K8T7B4   A0A2M3Z1F2   A0A2M3Z1D0   T1IIT8   A0A2M3Z1A1   L7MAM7   Q9VY91   N6T432   A0A023FIX2   A0A076FGM6   A0A131YUA9   A0A224Z6H7   A0A182MEH7   A0A2M4BLG1   A0A131XG79   W5JS62   Q7QFA1   A0A182XJZ8   A0A0P4WDU4   A0A131Y0S8   V5I0L4   A0A182VB79   A0A182QIS6   A0A1E1XBB3   A0A2M4A997   A0A1A9Z209   A0A1A9XZZ5   A0A1B0CHF0   A0A1A9VD60  

Pubmed

22118469    23622113    26354079    24845553    26227816    26334808    + More
25401762    25315136    25348373    26108605    24495485    20353571    25830018    27129103    18362917    19820115    24945155    17510324    17994087    26369729    18057021    28004739    25244985    17550304    15632085    23185243    20566863    25576852    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    23537049    26830274    28797301    28049606    20920257    23761445    12364791    25765539    28503490   

EMBL

GDQN01009266    JAT81788.1    AGBW02008362    OWR53570.1    GAIX01004356    JAA88204.1    + More
NWSH01000049    PCG80211.1    ODYU01001268    SOQ37247.1    KQ458863    KPJ04696.1    KQ460648    KPJ13149.1    AGBW02010436    OWR48520.1    KK853313    KDR08650.1    NEVH01011876    PNF31524.1    JTDY01003547    KOB69365.1    GEDC01017516    JAS19782.1    GEMB01002669    JAS00524.1    GECL01003621    JAP02503.1    GBGD01001465    JAC87424.1    GFTR01006292    JAW10134.1    GECZ01015938    JAS53831.1    GEBQ01012406    JAT27571.1    GBRD01000209    JAG65612.1    GBHO01034394    JAG09210.1    GBRD01000205    JAG65616.1    KA646537    KA649545    AFP61166.1    GAKP01018647    JAC40305.1    GDHF01015662    GDHF01013713    JAI36652.1    JAI38601.1    LJIG01016163    KRT81426.1    JRES01001065    KNC25876.1    GAMC01020816    GAMC01020815    GAMC01020814    GAMC01020813    GAMC01020812    JAB85741.1    EZ422234    ADD18510.1    GBXI01015377    GBXI01003097    JAC98914.1    JAD11195.1    GDKW01000940    JAI55655.1    GAHY01000113    JAA77397.1    ACPB03016273    GFDF01006703    JAV07381.1    PNF31523.1    KQ971311    EEZ99057.2    KYB29481.1    GAPW01001215    JAC12383.1    KYB29480.1    CH477361    EAT42655.1    GANO01002991    JAB56880.1    CH902625    KPU75458.1    GDAI01000731    JAI16872.1    EDV35157.1    KPU75457.1    GEZM01097804    JAV54096.1    CH916370    EDW00323.1    CH963925    EDW78382.2    OUUW01000003    SPP78097.1    CH933810    EDW07799.1    CP012528    ALC48570.1    GFDL01012661    JAV22384.1    CH940651    EDW65540.1    CM000162    EDX01618.1    CH379064    EDY72544.1    KRT06432.1    DS235131    EEB12349.1    CH479197    EDW27738.1    GFDL01012733    JAV22312.1    GFDL01012748    JAV22297.1    GFDL01012703    JAV22342.1    DS232478    EDS42356.1    GFDL01012660    JAV22385.1    CH954180    EDV47159.1    GBHO01034395    JAG09209.1    QCYY01002318    ROT71268.1    GBRD01004515    JAG61306.1    GGFM01001517    MBW22268.1    GGFM01001573    MBW22324.1    JH430212    GGFM01001525    MBW22276.1    GACK01004821    JAA60213.1    AE014298    BT023835    AAF48312.2    AAZ86756.1    ABW09411.1    AGB95374.1    AGB95375.1    APGK01053429    APGK01053430    APGK01053431    APGK01053432    KB741223    KB631623    ENN72393.1    ERL84761.1    GBBK01002611    JAC21871.1    KF516645    AII16549.1    GEDV01006821    JAP81736.1    GFPF01010784    MAA21930.1    AXCM01001073    GGFJ01004744    MBW53885.1    GEFH01003461    JAP65120.1    ADMH02000256    ETN67227.1    AAAB01008846    EAA06267.4    GDRN01065376    JAI64698.1    GEFM01003319    JAP72477.1    GANP01001876    JAB82592.1    AXCN02002231    GFAC01002797    JAT96391.1    GGFK01004052    MBW37373.1    AJWK01012304    AJWK01012305    AJWK01012306    AJWK01012307    AJWK01012308   

Proteomes

UP000007151    UP000218220    UP000053268    UP000053240    UP000027135    UP000235965    + More
UP000037510    UP000095300    UP000095301    UP000192223    UP000037069    UP000015103    UP000007266    UP000008820    UP000007801    UP000076408    UP000001070    UP000007798    UP000268350    UP000009192    UP000092553    UP000008792    UP000002282    UP000001819    UP000009046    UP000192221    UP000008744    UP000002320    UP000008711    UP000283509    UP000000803    UP000019118    UP000030742    UP000075883    UP000000673    UP000007062    UP000076407    UP000075903    UP000075886    UP000092445    UP000092443    UP000092461    UP000078200   

PRIDE

Q9VY91   

Pfam

PF02847   MA3

Interpro

IPR039778   PDCD4        + More
IPR016021   MIF4-like_sf       
IPR016024   ARM-type_fold       
IPR003891   Initiation_fac_eIF4g_MI       

SUPFAM

SSF48371   SSF48371       

Gene 3D

1.25.40.180    

ProteinModelPortal

A0A1E1W475   A0A212FIK6   S4PC15   A0A2A4K7K2   A0A2H1V8V6   A0A0N0PAF5   + More
A0A0N1PG73   A0A212F461   A0A067QIK1   A0A2J7QSG0   A0A0L7L1Q6   A0A1B6D254   A0A170Z2Q9   A0A0V0G3E2   A0A069DZ08   A0A1I8PVG0   A0A224XGH1   A0A1B6FUN2   A0A1B6LV66   A0A0K8TJ43   A0A0A9WWJ2   A0A1I8MS75   A0A0K8TJP3   T1PCP1   A0A034VEW0   A0A0K8VCS3   A0A1W4WT55   A0A0T6B278   A0A0L0C0V7   W8AY20   D3TLD2   A0A0A1WK73   A0A0P4VUE5   R4FPP6   T1I1S7   A0A1L8DLU4   A0A2J7QSH6   D6WCT0   A0A139WNU3   A0A023ESW1   A0A139WNA9   Q178N5   A0A1S4FBU7   U5ER32   A0A0P9AB19   A0A0K8TR71   B3MW12   A0A1Y1K444   A0A182YCV3   B4JL70   B4N1Z3   A0A3B0J7L6   B4L2D8   A0A0M4F8Y5   A0A1Q3F496   B4M1I6   B4Q2F7   B5DM27   E0VG43   A0A1W4VGL6   B4GY82   A0A1Q3F416   A0A1Q3F435   A0A1Q3F450   B0X887   A0A1Q3F498   B3NVZ4   A0A0A9WN83   A0A3R7NZL3   A0A0K8T7B4   A0A2M3Z1F2   A0A2M3Z1D0   T1IIT8   A0A2M3Z1A1   L7MAM7   Q9VY91   N6T432   A0A023FIX2   A0A076FGM6   A0A131YUA9   A0A224Z6H7   A0A182MEH7   A0A2M4BLG1   A0A131XG79   W5JS62   Q7QFA1   A0A182XJZ8   A0A0P4WDU4   A0A131Y0S8   V5I0L4   A0A182VB79   A0A182QIS6   A0A1E1XBB3   A0A2M4A997   A0A1A9Z209   A0A1A9XZZ5   A0A1B0CHF0   A0A1A9VD60  

PDB

3EIQ     E-value=8.67092e-68,     Score=651

KEGG

101742979    K16865 programmed cell death protein 4 | (RefSeq) programmed cell death protein 4-like

GO

GO:0045892   GO:0015018   GO:0005634   GO:0005829   GO:0030727   GO:2000738   GO:0005488   GO:0003824   GO:0016459   GO:0006470   GO:0008138   GO:0016491   GO:0016651   GO:0046835   GO:0006281   GO:0006259  

PANTHER

PTHR12626  

Length:

311

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00486

Exp number, first 60 AAs:

0.00025

Total prob of N-in:

0.02363

outside

1  -  311

 

 

Pi

3.25188

Theta

23.990466

Tajima's D

-1.093672

CLR

0.646415

CSRT

0.12114394280286

Interpretation

Uncertain