Gene

KWMTBOMO16519

Pre Gene Modal

BGIBMGA012212

Annotation

PREDICTED:_charged_multivesicular_body_protein_7_[Bombyx_mori]

Location

Bomo_Scaf006(-):44817-51095      View in EpiBrowser

Transcription factor

PLU-1

Location in the cell

Nuclear   Reliability : 2.361

CDS

ATGCATAGCTCTGCTCTTCTTGGGCTTACGCTAATAGGTATTATAACTCAAACAGCTGAACCAGATAAGAAAGCCACCCCCGTGACAGAGTCAGATGAAGCCCTTGTGAAGCTAGTCACAGCTGAGAGGCACTTGCACGGAGACTCCACAAGACTGTCCCGAGAACTAGCAACTATTGAGAATGATGCTCGAGCTGCACTTCAGCTAGGTAATAGGATTGCGGCCAAGAATCATCTGAGACGTAAGCACAAAGTGCAACGGAAACTGGAACAGTGCACGAAAGCTCTGGAAAACGTACAGAATTTACTACAACAGATGAGGGATGTACATTTCAATGCATCAATTGTCGATACTTACAAGACAACATCAGAAGCTATGAAGCGAGGATTAAAAGACAACGGTCTTGAGGTGGATACAGTTCACGACACGATGGACGATCTGAAAGAGGTAATGGATTCATATAGCGAAATGGAGAGAGCACTTGGTACAACAATAGACGACACCGACACAGCTGAGCTTGAAAGAGAATTGAAGGAACTGCTGTCGGGACCGTCGGCGCCTGGTGGCGGAACTCCCGGGAAGGAGGGGGAGGTGAAGGAATAA

Protein

MHSSALLGLTLIGIITQTAEPDKKATPVTESDEALVKLVTAERHLHGDSTRLSRELATIENDARAALQLGNRIAAKNHLRRKHKVQRKLEQCTKALENVQNLLQQMRDVHFNASIVDTYKTTSEAMKRGLKDNGLEVDTVHDTMDDLKEVMDSYSEMERALGTTIDDTDTAELERELKELLSGPSAPGGGTPGKEGEVKE

Uniprot

A0A2A4JL95   A0A3S2NFQ0   A0A2W1BJP7   B0WFW4   A0A2S2NB11   J9JTF6   + More
A0A1Q3F7D4   A0A154PEC2   A0A232EKP0   K7IPF6   A0A084W184   U4UUL4   A0A182GRB1   V5H4X7   A0A1J1J023   A0A1S3D855   A0A088AS34   N6U305   J3JWH1   Q16F51   Q16P72   A0A182RJU3   A0A182WAY9   A0A2M4AJG2   A0A2L2Y6A8   A0A2M4CIQ5   A0A182PVB5   A0A1W5B7G0   A0A195EZ66   A0A2M4CJZ3   A0A195CFJ8   A0A2A3E849   A0A1B6F3N6   A0A2S2QMR1   A0A182NQB8   A0A336MSN9   A0A1S3IJS9   A0A1B6CL40   A0A151J6B3   A0A158NYV4   F4W9T3   A0A310S7L8   T1J0Y3   A0A182SNA2   A0A0K0DIC0   A0A151WKH0   D6WCG1   A0A0L7RG44   A0A195BS09   A0A2J7RPS3   A0A2H2IIF6   A0A026WCP7   A0A0M9A5D6   A0A2J7RPT6   A0A182FT74   E2A5S8   F6ZFT6   A0A2J7RPT7   A0A0A1WZX0   C3Y5U4   A0A182INU5   A0A336L5J9   A0A2G8L8I7   Q22718   A0A0J7L3K2   A0A182MBU3   A0A2M3ZIT0   A0A2M3ZIS7   A0A0V0GAA9   E0VG15   A0A1I7UAZ8   A0A2P6KX35   A0A0C2GRJ9   A0A1I8NXI1   A0A182QIJ9   W4Y2H9   A0A3B0KTV5   W8C2U3   A0A023F7L9   A0A016UQA1   A0A2M4BQC7   A0A016UP83   A8WSG3   G0NP07   K7GIA6   A0A2G5V177   A0A0B1SG72   B3NIK7   G3VRQ4  

Pubmed

28756777    28648823    20075255    24438588    23537049    26483478    + More
22516182    17510324    26561354    21347285    21719571    18362917    19820115    24508170    30249741    20798317    12481130    15114417    25830018    18563158    29023486    9851916    20566863    24495485    25474469    25730766    14624247    17381049    17994087    21709235   

EMBL

NWSH01001067    PCG72827.1    RSAL01000132    RVE46375.1    KZ150102    PZC73487.1    + More
DS231921    EDS26499.1    GGMR01001775    MBY14394.1    ABLF02032620    GFDL01011569    JAV23476.1    KQ434887    KZC10212.1    NNAY01003732    OXU18930.1    ATLV01019246    KE525266    KFB43978.1    KB632375    ERL93876.1    JXUM01016395    KQ560457    KXJ82319.1    GALX01000603    JAB67863.1    CVRI01000063    CRL04766.1    APGK01051693    APGK01051694    KB741201    ENN72952.1    BT127589    AEE62551.1    CH478510    EAT32866.1    CH477792    EAT36162.1    GGFK01007602    MBW40923.1    IAAA01017265    LAA03712.1    GGFL01001039    MBW65217.1    KQ981909    KYN33169.1    GGFL01001040    MBW65218.1    KQ977876    KYM99091.1    KZ288329    PBC27927.1    GECZ01024873    JAS44896.1    GGMS01009229    MBY78432.1    UFQT01001639    SSX31287.1    GEDC01023114    GEDC01019449    JAS14184.1    JAS17849.1    KQ979868    KYN18745.1    ADTU01000801    GL888033    EGI69069.1    KQ765323    KQ759877    OAD53989.1    OAD62272.1    JH431742    KQ983012    KYQ48336.1    KQ971311    EEZ99020.1    KQ414599    KOC69794.1    KQ976423    KYM88792.1    NEVH01001355    PNF42842.1    KK107315    QOIP01000002    EZA52824.1    RLU25894.1    KQ435750    KOX76283.1    PNF42843.1    GL437059    EFN71200.1    EAAA01002610    PNF42844.1    GBXI01010354    JAD03938.1    GG666487    EEN64341.1    UFQS01002092    UFQT01002092    SSX13206.1    SSX32645.1    MRZV01000170    PIK56578.1    BX284602    CAA92759.1    LBMM01000802    KMQ97457.1    AXCM01004171    GGFM01007671    MBW28422.1    GGFM01007680    MBW28431.1    GECL01001131    JAP04993.1    DS235131    EEB12321.1    MWRG01004044    PRD30890.1    KN728360    KIH63910.1    AXCN02001893    AAGJ04077408    OUUW01000012    SPP87338.1    GAMC01006389    JAC00167.1    GBBI01001513    JAC17199.1    KE124792    JARK01001369    EPB79523.1    EYC16673.1    GGFJ01006032    MBW55173.1    EYC16672.1    HE601438    CAP23422.2    GL379918    EGT35085.1    AGCU01168837    AGCU01168838    PDUG01000002    PIC45510.1    KN581729    KHJ82160.1    CH954178    EDV52503.1    AEFK01028569    AEFK01028570   

Proteomes

UP000218220    UP000283053    UP000002320    UP000007819    UP000076502    UP000215335    + More
UP000002358    UP000030765    UP000030742    UP000069940    UP000249989    UP000183832    UP000079169    UP000005203    UP000019118    UP000008820    UP000075900    UP000075920    UP000075885    UP000078541    UP000078542    UP000242457    UP000075884    UP000085678    UP000078492    UP000005205    UP000007755    UP000075901    UP000035642    UP000075809    UP000007266    UP000053825    UP000078540    UP000235965    UP000005237    UP000053097    UP000279307    UP000053105    UP000069272    UP000000311    UP000008144    UP000001554    UP000075880    UP000230750    UP000001940    UP000036403    UP000075883    UP000009046    UP000095282    UP000095300    UP000075886    UP000007110    UP000268350    UP000024635    UP000008549    UP000008068    UP000007267    UP000230233    UP000008711    UP000007648   

Pfam

PF03357   Snf7        + More
PF10274   ParcG

Interpro

IPR005024   Snf7_fam        + More
IPR019399   Parkin_co-regulated_protein       

ProteinModelPortal

A0A2A4JL95   A0A3S2NFQ0   A0A2W1BJP7   B0WFW4   A0A2S2NB11   J9JTF6   + More
A0A1Q3F7D4   A0A154PEC2   A0A232EKP0   K7IPF6   A0A084W184   U4UUL4   A0A182GRB1   V5H4X7   A0A1J1J023   A0A1S3D855   A0A088AS34   N6U305   J3JWH1   Q16F51   Q16P72   A0A182RJU3   A0A182WAY9   A0A2M4AJG2   A0A2L2Y6A8   A0A2M4CIQ5   A0A182PVB5   A0A1W5B7G0   A0A195EZ66   A0A2M4CJZ3   A0A195CFJ8   A0A2A3E849   A0A1B6F3N6   A0A2S2QMR1   A0A182NQB8   A0A336MSN9   A0A1S3IJS9   A0A1B6CL40   A0A151J6B3   A0A158NYV4   F4W9T3   A0A310S7L8   T1J0Y3   A0A182SNA2   A0A0K0DIC0   A0A151WKH0   D6WCG1   A0A0L7RG44   A0A195BS09   A0A2J7RPS3   A0A2H2IIF6   A0A026WCP7   A0A0M9A5D6   A0A2J7RPT6   A0A182FT74   E2A5S8   F6ZFT6   A0A2J7RPT7   A0A0A1WZX0   C3Y5U4   A0A182INU5   A0A336L5J9   A0A2G8L8I7   Q22718   A0A0J7L3K2   A0A182MBU3   A0A2M3ZIT0   A0A2M3ZIS7   A0A0V0GAA9   E0VG15   A0A1I7UAZ8   A0A2P6KX35   A0A0C2GRJ9   A0A1I8NXI1   A0A182QIJ9   W4Y2H9   A0A3B0KTV5   W8C2U3   A0A023F7L9   A0A016UQA1   A0A2M4BQC7   A0A016UP83   A8WSG3   G0NP07   K7GIA6   A0A2G5V177   A0A0B1SG72   B3NIK7   G3VRQ4  

PDB

5FD7     E-value=6.90999e-05,     Score=106

KEGG

101743118    K15053 charged multivesicular body protein 7 | (RefSeq) uncharacterized LOC101743118

PATHWAY

04144    Endocytosis - Bombyx mori (domestic silkworm)

GO

GO:0007034   GO:0016021   GO:0000815   GO:0010458   GO:0031468   GO:0005829   GO:0005635   GO:0000785   GO:0007080   GO:0071168   GO:0061952   GO:0045324   GO:0003824   GO:0016459   GO:0006470   GO:0008138   GO:0016491   GO:0016651   GO:0046835   GO:0006281   GO:0006259  

SignalP

Position:   1 - 21,         Likelihood:  0.854722

 

 

Length:

200

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.01765

Exp number, first 60 AAs:

0.01765

Total prob of N-in:

0.01733

outside

1  -  200

 

 

Pi

3.074427

Theta

18.900453

Tajima's D

-1.137184

CLR

0.058963

CSRT

0.110244487775611

Interpretation

Uncertain