Silkworm Genome Informatics Database

Gene

KWMTBOMO16506

Pre Gene Modal

BGIBMGA004598

Annotation

PREDICTED:_dual_specificity_protein_phosphatase_1B-like_[Amyelois_transitella]

Location

Bomo_Scaf004(+):61576-62400 View in EpiBrowser

Location in the cell

PlasmaMembrane Reliability : 4.129

CDS

ATGATTAGTGCGAGAGGATTGCTCTTTGTGATGTTCAAAAGCGCCTTCATTGTCGCTTTTCTCACCATCCCCAACCCGGTCGTGGCGCTTTCCAGCTTCAAGAACTGGTCTAGGAAGGCCTTCTACCACAAGATCGACCTCTGCACTCAATCTTGCTACAGCCAGATCATTCCGGGCCTCTATTTGAGCAATGCCCGCGCTGCAGCCGACAAAAATGTCCTTCGAAGCCTCAACATCACGCACGTGCTCACCATTGCGGCGAATCGCCTCCCGAAATCTACTTTCTATGATACCGACATCAACACCCTGTTCATTAGGGCCTACGACACTCCTCAGACCAATCTCCTGCCCTACTTCCCAATGGCCAACTCCTTCATTGATGAGGGCCTACAGGCGGGCAACGTGCTCGTCCACTGTCACTTTGGTGTTTCCAGGTCTGCGACCCTGGTCATCGCGTATATCATGGAGAAATACAAGCTGACGTTCGAACAGGCGTATGTGTATGTTAGACAGCGCAGACGGTTCATTAACCCGAACCCTGGATTCGTGAAGCAGCTCAGAGAATACCATCAGCTGGGCTACGACGTGAGTAGCTTTCAAAGATTCGAAGCTTACATGCAGGTTAAAGCGAGGAAACACAAGTACAAGATAGCTTCCCTAGCGGCAGTAATGGTTGGAGTCTTGGTTCCAATCGTCATGTTGGTTGGATAA

Protein

MISARGLLFVMFKSAFIVAFLTIPNPVVALSSFKNWSRKAFYHKIDLCTQSCYSQIIPGLYLSNARAAADKNVLRSLNITHVLTIAANRLPKSTFYDTDINTLFIRAYDTPQTNLLPYFPMANSFIDEGLQAGNVLVHCHFGVSRSATLVIAYIMEKYKLTFEQAYVYVRQRRRFINPNPGFVKQLREYHQLGYDVSSFQRFEAYMQVKARKHKYKIASLAAVMVGVLVPIVMLVG

Uniprot

H9J508 A0A2A4JVQ2 A0A2H1W6F0 A0A3S2LGQ6 A0A212EZT6 A0A194QFT0 + More
A0A194RH64 A0A0L7L4Q5 A0A232ENK9 A0A0N1IIT2 K7ITQ9 A0A194PW30 A0A310SQ12 A0A0M8ZQ12 A0A0L7R535 A0CV08 A0A154PD73 A0A1A9ZKU1 A0A1A9YMH8 A0A1B0BDL7 A0A2A3EGY1 A0A1B0G8N9

Pubmed

19121390 22118469 26354079 26227816 28648823 20075255 + More
17086204

EMBL

BABH01025787 NWSH01000519 PCG75889.1 ODYU01006611 SOQ48607.1 RSAL01000012 + More
RVE53485.1 AGBW02011223 OWR47015.1 KQ459249 KPJ02306.1 KQ460207 KPJ16779.1 JTDY01002926 KOB70473.1 NNAY01003140 OXU19917.1 KQ459717 KPJ20291.1 KQ459596 KPI95340.1 KQ761783 OAD56995.1 KQ436003 KOX67636.1 KQ414654 KOC65958.1 CT868196 CAK74625.1 KQ434874 KZC09747.1 JXJN01012511 KZ288256 PBC30542.1 CCAG010000297

Proteomes

UP000005204 UP000218220 UP000283053 UP000007151 UP000053268 UP000053240 + More
UP000037510 UP000215335 UP000002358 UP000053105 UP000053825 UP000000600 UP000076502 UP000092445 UP000092443 UP000092460 UP000242457 UP000092444

PRIDE

H9J508

Pfam

PF00782   DSPc        + More
PF00176   SNF2_N
PF00271   Helicase_C

Interpro

IPR016130   Tyr_Pase_AS        + More
IPR029021   Prot-tyrosine_phosphatase-like
IPR020422   TYR_PHOSPHATASE_DUAL_dom
IPR000340   Dual-sp_phosphatase_cat-dom
IPR000387   TYR_PHOSPHATASE_dom
IPR003595   Tyr_Pase_cat
IPR016278   DUSP12
IPR001650   Helicase_C
IPR014001   Helicase_ATP-bd
IPR038718   SNF2-like_sf
IPR027417   P-loop_NTPase
IPR000330   SNF2_N

SUPFAM

SSF52799 SSF52799 + More
SSF52540 SSF52540

Gene 3D

3.90.190.10 3.40.50.10810

CDD

cd00127 DSPc
cd00079 HELICc

ProteinModelPortal

H9J508 A0A2A4JVQ2 A0A2H1W6F0 A0A3S2LGQ6 A0A212EZT6 A0A194QFT0 + More
A0A194RH64 A0A0L7L4Q5 A0A232ENK9 A0A0N1IIT2 K7ITQ9 A0A194PW30 A0A310SQ12 A0A0M8ZQ12 A0A0L7R535 A0CV08 A0A154PD73 A0A1A9ZKU1 A0A1A9YMH8 A0A1B0BDL7 A0A2A3EGY1 A0A1B0G8N9

PDB

3F81 E-value=3.72034e-22, Score=256

KEGG

101744546 K14819 dual specificity phosphatase 12 [EC:3.1.3.16 3.1.3.48] | (RefSeq) dual specificity protein ph

GO

GO:0004725 GO:0016021 GO:0008138 GO:0016787 GO:0005524 GO:0005737 GO:0016311 GO:0016791 GO:0006470 GO:0016491 GO:0016651 GO:0046835 GO:0006281 GO:0006259

SignalP

Position: 1 - 29, Likelihood: 0.708808

Length:

236

Number of predicted TMHs:

2

Exp number of AAs in TMHs:

42.38597

Exp number, first 60 AAs:

21.41624

Total prob of N-in:

0.10178

POSSIBLE N-term signal

sequence

outside

1 - 14

TMhelix

15 - 37

inside

38 - 216

TMhelix

217 - 235

outside

236 - 236

Pi

22.257682

Theta

28.579271

Tajima's D

-0.680366

CLR

0

CSRT

0.198690065496725

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics

Multiple alignment of Orthologues

Gene Tree