Gene
KWMTBOMO16502
Pre Gene Modal
BGIBMGA004563
Annotation
PREDICTED:_facilitated_trehalose_transporter_Tret1-2_homolog_[Bombyx_mori]
Location in the cell
PlasmaMembrane Reliability : 4.992
Sequence
CDS
ATGTATATTTCAGCTTCAATCGCAACCCTACCGGTGGCTCCTGCCTGTCTTATATCTGGATGGATATTTGAGAGATTTGGAAGAAGACCAGCTCTATTCATCACATGTGCCCCGTTTCTACTTGGATGGGCTCTCATAATAAAAGCAAACAACCTCACCCTCATGCTGTGCGGGAGATTTTTCACAGGGATGTGCACAGGATTGATAGGTCCTTTGGCATCGGTCTACATAGGAGAAACTACGGAACCGAAGTATAGAGGTCTCTTCCTCGCTGCTATTTCATTAGCAATGGCATCAGGAATGTTTTTCTCGCATATTATCGGCACATTTATATCATGGCAGTGGACTGCGGTCATCTGCGCTCTGTTGCCAATATTAAGTCTAGTTTTATTAGTTTTTGTACCAGAGTCTCCCACTTGGTTAATATCAAGAGGTCACATTGAGGAGGGTGCCAAGGTTTATTACTGGTTAAGAGGGTATAGTGATGAAGCCAAAGATGAATTGAAAGATATAATCGATCAAAATATGGCTTGGATACCCCTATCATGCTTTATGCTCTATATTTGTGCGATTTCAATTGGTCTAGTTCCGTTGCCCTGGATGATGTGTGGGGAGATATTTCCGACTAAGGTTCGAGGCTTAGGTTCGGGAGTTAGTTCAGCTGTGGGTTTGGTCTCTGTATTTGTAGTAGTTAAAACCGCACCAGGCATGATGTCTCACTTGGGACAAGTGTTTACTTTCTCGTTTTACGGAGCGATCGCCTTTATTGGAAGCATCATATTATTCTTTGTTCTCCCCGAGACCAAAGGAAGGAGTCTACAGGAGATTGAAGACAAATTTAAAAATCAAAAGAGTAATGGCTCAAAGTTTTGA
Protein
MYISASIATLPVAPACLISGWIFERFGRRPALFITCAPFLLGWALIIKANNLTLMLCGRFFTGMCTGLIGPLASVYIGETTEPKYRGLFLAAISLAMASGMFFSHIIGTFISWQWTAVICALLPILSLVLLVFVPESPTWLISRGHIEEGAKVYYWLRGYSDEAKDELKDIIDQNMAWIPLSCFMLYICAISIGLVPLPWMMCGEIFPTKVRGLGSGVSSAVGLVSVFVVVKTAPGMMSHLGQVFTFSFYGAIAFIGSIILFFVLPETKGRSLQEIEDKFKNQKSNGSKF
Summary
Uniprot
ProteinModelPortal
PDB
6H7D
E-value=2.38874e-08,
Score=138
Ontologies
GO
Topology
Length:
290
Number of predicted TMHs:
8
Exp number of AAs in TMHs:
165.03268
Exp number, first 60 AAs:
40.35934
Total prob of N-in:
0.19314
POSSIBLE N-term signal
sequence
outside
1 - 3
TMhelix
4 - 23
inside
24 - 29
TMhelix
30 - 47
outside
48 - 59
TMhelix
60 - 78
inside
79 - 84
TMhelix
85 - 107
outside
108 - 111
TMhelix
112 - 134
inside
135 - 176
TMhelix
177 - 199
outside
200 - 213
TMhelix
214 - 231
inside
232 - 243
TMhelix
244 - 266
outside
267 - 290
Population Genetic Test Statistics
Pi
29.515031
Theta
38.107239
Tajima's D
-0.766905
CLR
0.001691
CSRT
0.189740512974351
Interpretation
Uncertain
