Gene

KWMTBOMO16500

Pre Gene Modal

BGIBMGA004565

Annotation

PREDICTED:_uncharacterized_protein_LOC101743387_isoform_X1_[Bombyx_mori]

Location

Bomo_Scaf003(-):147174-157355      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 2.125

CDS

ATGTCCTTAGCCGAAGGAGCTTCAGACACAGAACAGGCCAGGCAAGAGGAAGATAAGAGCTCGACCACGCTCCAGAAAACCAACGAGAAACGTCAGATGTCCGACTCGTACATGTGGAAAGAACAGATTCACACTCTAATGAAGGGCGGAGAGAGCGAGTCCGACATATCGGACTCGGAGCATTTCCTCACAAAGGGCGCCTTCCTTCTCACTCCCTCCCACGGCCTCAGCATGGAAAAAGCCTCCACCATCTGTGAGAAGATGGAGTTCAAGGGATGCTTCTCCCTGACGAAGACTGCTACTGGAATACTCTTTAAGTTTTCCAGCGTCGATGACTATCAGATGGTATTCAAGAAAGGTTTCCATAAAGTTACCGGATCGCGATTCTATAGGAAGATCGCTATTCCGTGCAGACCGCAGAAGACCTTTACCATTTACGTATACGACATTCCCGATGAGATCCCAGAGGAGGATGTGCGCCACGCTTTGTACAAATTTACTTCAGTCGTTGAGGTCGTCAGGCTGTATTACTCTGGATCCCCAAAAGACGGGAACACTGGTACATCGACCCCAAAACCAGAGAAGACCTCGTCCCGAGCTCTCACGACAATTGATGGAGAGCTCGTGAGCAGCATGGTGCCGAAGGAAGCCACGAGCGTGGTCCGTGTCACTCTCGCCAACATCGAGGAAGCCAACATTCTGCTGCAAAACGGCCTGGATTTCTACGGAGCTACGTTCTTTCCAACCGAATTAGCTACCCCAACCCAGGCAGCTAAGTTGATTAAGCCTAGCAAAGTAACTGGAGGTACCGTGTCAGCCAGAGTCCGTGATTTGCTCCCGGTCTTCGACCAGCAAGGGTTCGCCAAGTTCGCTCCACCGGCCTCTAGACTGGTGAAGCCACGTTCCAAGTGA

Protein

MSLAEGASDTEQARQEEDKSSTTLQKTNEKRQMSDSYMWKEQIHTLMKGGESESDISDSEHFLTKGAFLLTPSHGLSMEKASTICEKMEFKGCFSLTKTATGILFKFSSVDDYQMVFKKGFHKVTGSRFYRKIAIPCRPQKTFTIYVYDIPDEIPEEDVRHALYKFTSVVEVVRLYYSGSPKDGNTGTSTPKPEKTSSRALTTIDGELVSSMVPKEATSVVRVTLANIEEANILLQNGLDFYGATFFPTELATPTQAAKLIKPSKVTGGTVSARVRDLLPVFDQQGFAKFAPPASRLVKPRSK

Uniprot

A0A2A4JV89   A0A2A4JVM7   A0A2W1BJJ6   H9J4X5   A0A3S2LCE5   A0A194QPX6   + More
A0A212FCB2   A0A2H1WFL9   I4DK58   A0A0L7KMS4   A0A0L7K3E7   W8CBR0   A0A1J1IRE9   B4L673   A0A034V2A9   A0A0A1X766   A0A0K8VCF4   A0A1I8NF41   A0A0Q9XSK6   A0A0L0CDX7   A0A1B0FGI8   A0A0P9CFF5   A0A2P8ZFZ1   A0A182IR26   A0A1B0BJW1   A0A1A9YPL0   A0A0Q9X8G7   A7US28   A0A084WF90   A0A1A9VC71   A0A1B0A9W1   A0A1L8DD19   A0A2J7RRF9   A0A182USJ1   A0A182XNG1   A0A182IDQ9   A0A1A9WFW4   A0A182TGG9   A0A1B0CG90   A0A0M4F8T1   B3MQ59   A0A067QTL7   A0A1I8NZD9   B4NPD4   A8JUZ6   A0A0P9A5P1   A0A182PKY6   A0A0R1E9B2   A0A182K5G6   A0A0Q5T5B7   E2C7B8   A0A182QY71   A0A182VV53   A0A1W4VG14   A0A182NC44   A0A088AEH6   A0A0R3P1G5   A0A3B0KDJ3   A0A0L7QMW3   B4MAJ2   A0A195FSY9   F4WBZ1   A0A195BKY5   A0A158NZ15   F5HJ22   A0A3L8DWQ9   A0A1W4VSP0   A0A151WV06   A0A1B6LPR9   A0A0M9A0P0   A0A0C9RUC8   A0A3Q0JCK5   Q9W426   A0A182FMH7   A0A0R3P176   A0A3B0KMI6   A0A3B0KR09   A0A0R3P1A0   Q29GF9   A0A0C9RX14   A0A2S2QPM4   A0A2S2PSF8   A0A1W4VFQ8   A0A0R1EFH2   A0A0Q5T5B1   A0A0R3P173   A0A182RM50   A0A3B0KIR2   A0A1W4VTC4   A0A1B6D4C6   A0A023EQN0   A0A2A3EKB2   A0A1S4G7S3   J9KLL3   A0A182Y4T3   E2AAJ6   A0A1W4VU16   B4I0D8   X2JCR6  

Pubmed

28756777    19121390    26354079    22118469    22651552    26227816    + More
24495485    17994087    25348373    25830018    25315136    26108605    29403074    12364791    24438588    24845553    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    17550304    20798317    15632085    21719571    21347285    30249741    24945155    26483478    17510324    25244985   

EMBL

NWSH01000578    PCG75534.1    PCG75533.1    KZ150249    PZC71833.1    BABH01025721    + More
RSAL01000045    RVE50590.1    KQ458671    KPJ05556.1    AGBW02009205    OWR51385.1    ODYU01008354    SOQ51879.1    AK401676    BAM18298.1    JTDY01008796    KOB64391.1    JTDY01013133    KOB52184.1    GAMC01000249    JAC06307.1    CVRI01000057    CRL02306.1    CH933812    EDW05869.1    GAKP01022695    JAC36257.1    GBXI01007325    JAD06967.1    GDHF01016109    JAI36205.1    KRG07064.1    JRES01000520    KNC30450.1    CCAG010007469    CH902621    KPU81616.1    PYGN01000070    PSN55412.1    JXJN01015632    JXJN01015633    CH964291    KRG00376.1    AAAB01008811    EDO64480.2    ATLV01023319    KE525342    KFB48884.1    GFDF01009817    JAV04267.1    NEVH01000610    PNF43395.1    APCN01004772    AJWK01010859    CP012528    ALC48482.1    EDV44485.1    KK853497    KDR07203.1    EDW86374.2    AE014298    BT081991    ABW09343.1    ACO56230.1    KPU81617.1    CM000162    KRK05867.1    CH954180    KQS30460.1    GL453369    EFN76105.1    AXCN02001427    CH379064    KRT07001.1    OUUW01000011    SPP86330.1    KQ414864    KOC59992.1    CH940655    EDW66251.2    KQ981276    KYN43563.1    GL888067    EGI68280.1    KQ976444    KYM86205.1    ADTU01004475    EGK96283.1    QOIP01000003    RLU24515.1    KQ982720    KYQ51684.1    GEBQ01014299    JAT25678.1    KQ435782    KOX74757.1    GBYB01012420    JAG82187.1    AAF46134.2    KRT07003.1    SPP86331.1    SPP86328.1    KRT07002.1    EAL32150.3    GBYB01012421    JAG82188.1    GGMS01010485    MBY79688.1    GGMR01019665    MBY32284.1    KRK05866.1    KQS30457.1    KRT06999.1    SPP86329.1    GEDC01016780    JAS20518.1    JXUM01082443    JXUM01082444    JXUM01082445    GAPW01002689    KQ563313    JAC10909.1    KXJ74079.1    KZ288230    PBC31619.1    ABLF02029226    GL438128    EFN69543.1    CH480819    EDW52969.1    AHN59406.1   

Proteomes

UP000218220    UP000005204    UP000283053    UP000053268    UP000007151    UP000037510    + More
UP000183832    UP000009192    UP000095301    UP000037069    UP000092444    UP000007801    UP000245037    UP000075880    UP000092460    UP000092443    UP000007798    UP000007062    UP000030765    UP000078200    UP000092445    UP000235965    UP000075903    UP000076407    UP000075840    UP000091820    UP000075902    UP000092461    UP000092553    UP000027135    UP000095300    UP000000803    UP000075885    UP000002282    UP000075881    UP000008711    UP000008237    UP000075886    UP000075920    UP000192221    UP000075884    UP000005203    UP000001819    UP000268350    UP000053825    UP000008792    UP000078541    UP000007755    UP000078540    UP000005205    UP000279307    UP000075809    UP000053105    UP000079169    UP000069272    UP000075900    UP000069940    UP000249989    UP000242457    UP000007819    UP000076408    UP000000311    UP000001292   

PRIDE

H9J4X5    Q9W426   

Pfam

PF00587   tRNA-synt_2b

Interpro

IPR035979   RBD_domain_sf        + More
IPR006195   aa-tRNA-synth_II       
IPR002317   Ser-tRNA-ligase_type_1       
IPR002314   aa-tRNA-synt_IIb       

SUPFAM

SSF54928   SSF54928       

ProteinModelPortal

A0A2A4JV89   A0A2A4JVM7   A0A2W1BJJ6   H9J4X5   A0A3S2LCE5   A0A194QPX6   + More
A0A212FCB2   A0A2H1WFL9   I4DK58   A0A0L7KMS4   A0A0L7K3E7   W8CBR0   A0A1J1IRE9   B4L673   A0A034V2A9   A0A0A1X766   A0A0K8VCF4   A0A1I8NF41   A0A0Q9XSK6   A0A0L0CDX7   A0A1B0FGI8   A0A0P9CFF5   A0A2P8ZFZ1   A0A182IR26   A0A1B0BJW1   A0A1A9YPL0   A0A0Q9X8G7   A7US28   A0A084WF90   A0A1A9VC71   A0A1B0A9W1   A0A1L8DD19   A0A2J7RRF9   A0A182USJ1   A0A182XNG1   A0A182IDQ9   A0A1A9WFW4   A0A182TGG9   A0A1B0CG90   A0A0M4F8T1   B3MQ59   A0A067QTL7   A0A1I8NZD9   B4NPD4   A8JUZ6   A0A0P9A5P1   A0A182PKY6   A0A0R1E9B2   A0A182K5G6   A0A0Q5T5B7   E2C7B8   A0A182QY71   A0A182VV53   A0A1W4VG14   A0A182NC44   A0A088AEH6   A0A0R3P1G5   A0A3B0KDJ3   A0A0L7QMW3   B4MAJ2   A0A195FSY9   F4WBZ1   A0A195BKY5   A0A158NZ15   F5HJ22   A0A3L8DWQ9   A0A1W4VSP0   A0A151WV06   A0A1B6LPR9   A0A0M9A0P0   A0A0C9RUC8   A0A3Q0JCK5   Q9W426   A0A182FMH7   A0A0R3P176   A0A3B0KMI6   A0A3B0KR09   A0A0R3P1A0   Q29GF9   A0A0C9RX14   A0A2S2QPM4   A0A2S2PSF8   A0A1W4VFQ8   A0A0R1EFH2   A0A0Q5T5B1   A0A0R3P173   A0A182RM50   A0A3B0KIR2   A0A1W4VTC4   A0A1B6D4C6   A0A023EQN0   A0A2A3EKB2   A0A1S4G7S3   J9KLL3   A0A182Y4T3   E2AAJ6   A0A1W4VU16   B4I0D8   X2JCR6  

KEGG

101743387    no KO assigned | (RefSeq) uncharacterized LOC101743387

GO

GO:0003676   GO:0006434   GO:0004828   GO:0005524   GO:0000166   GO:0022857   GO:0008270   GO:0016491   GO:0016651   GO:0046835   GO:0006281   GO:0006259  

PANTHER

PTHR11778  

Length:

303

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00375

Exp number, first 60 AAs:

0

Total prob of N-in:

0.01759

outside

1  -  303

 

 

Pi

30.456435

Theta

32.314521

Tajima's D

-0.568624

CLR

0.005974

CSRT

0.228838558072096

Interpretation

Uncertain