Gene

KWMTBOMO16499

Pre Gene Modal

BGIBMGA004566

Annotation

PREDICTED:_facilitated_trehalose_transporter_Tret1-like_isoform_X2_[Bombyx_mori]

Location

Bomo_Scaf003(-):134217-141535      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 4.977

CDS

ATGCCCAAAATAACACCTTACATGAAACAATGTTTCGTAACAACGGCGATAGGGTTCAACATCATTGGTCACGGAGCCGCCAGCGGATTCCCTGCTATCTTACTACCGCAGCTTCATAAACCGGACTCAGGGTTTAAGCTTACACGATCGCAGGACTCTTGGTTAGCGTCGACCGTCGGTTTGACCCTTTTACTGGGTAGTTTCTCAGCGGCTTCAGTAATGGGCACCAAGGGTCGGAAGGCGGCCCACTACACGATCAGCGTCCTGGGCATTATTGGTTGGGTGATCACGATTCTGGCAACTAGTTTTTGGCTATTAATCGTCGGTCGGATAATACTGGGAATCTCATTCGTTATGATGATCCCGCTTCGCTCTGCACTGATCGGTGAATACACTAGCCCCAAGAGCAGAGGCGCGTTTCTGGCCACCGTTTCCCTAGCGCAAGGCTTCGGAATCTTCTTTGTTCACCTCATAGGATCACTAATCAGCTGGCAAAGAACAGCGCTTGTATGTCTCTTCCTGCCATTCATAAGTCTGGTCATGACTTTATTCAGTCCAGAATCTCCGAGCTGGCTGGCTTCTCAAGGGAGGTACGAGGAATCCCGAGAAGCATTCCGATGGTTGAGGGGTGACCAAGAAGAAGACGAGCTTGAGAAGATGATTAGTGCTAGGATCGCATTCAAAGAGTCAAGACAAGGCAGAAAAATCACTATGTTCGGTACAATAAAAAAGAAAGAGTTCTACAAGCCTATAATATTGATGTTCCACGCTTATTCGCTGAGTCAGTCGTGCGGCTTGGTCACTATGGCGGCCTTTTCGACAATTATAATTAAGAACGTCATGGGTGACGTGAATGCAGACATGTGGATGGTAATATTCGACACAGAGAGAATATTGACCAATACGCTGGCCGTGTTCATTATACACAAGTTTAAGAGGAGGACTATGATGTTCTCCGCCGGAGGACTGAGTCTTGCTAGTCACATTGGTGTTATATTTTACGTATACTTAAGAAATAATAACAGCCTTCCCGTATCAGGGATCTGGCTTCCTGCGCTGCTGTTGGCCTTGCAGTTCTTTGCAATGTCGGTAGGAGTGACTCCCATGCCAAGTGTAATGGCCGGAGAGGTTTTCCCGTTGCAGTACAGGAGTCTAGCTGGGAGTATTAGTTTAGTATCGTTATCGTCTACTATGTTTCTGATACTTAAAACTTTTACTGGCTTAATCGATTCCGTCGGTATTGAAGGGACTTACGCGGTATACTCGTTTTCTATAGTGTATTGTCTTCTCGTCATGTGGTTTTTGATGCCGGAGACGAAGGGCAGGACGCTACAGGAAATCGAAGATGGATTCCGAGGGAAGCCAATTGTAACACGTGAGCTTATCGAAAAGAAATCACTGAAGGATGATGAAACGGAATTAGAAACGAAGAGTTTAACATAA

Protein

MPKITPYMKQCFVTTAIGFNIIGHGAASGFPAILLPQLHKPDSGFKLTRSQDSWLASTVGLTLLLGSFSAASVMGTKGRKAAHYTISVLGIIGWVITILATSFWLLIVGRIILGISFVMMIPLRSALIGEYTSPKSRGAFLATVSLAQGFGIFFVHLIGSLISWQRTALVCLFLPFISLVMTLFSPESPSWLASQGRYEESREAFRWLRGDQEEDELEKMISARIAFKESRQGRKITMFGTIKKKEFYKPIILMFHAYSLSQSCGLVTMAAFSTIIIKNVMGDVNADMWMVIFDTERILTNTLAVFIIHKFKRRTMMFSAGGLSLASHIGVIFYVYLRNNNSLPVSGIWLPALLLALQFFAMSVGVTPMPSVMAGEVFPLQYRSLAGSISLVSLSSTMFLILKTFTGLIDSVGIEGTYAVYSFSIVYCLLVMWFLMPETKGRTLQEIEDGFRGKPIVTRELIEKKSLKDDETELETKSLT

Similarity

Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.

Uniprot

H9J4X6   A0A2A4JT91   H9J4X7   A0A2H1WAU6   A0A2A4JTG8   A0A023PNK9   + More
A0A2W1BD78   A0A2A4JUU3   A0A2H1WFL6   A0A2H1W936   A0A0N1IPS2   A0A194QHU0   A0A194QJI7   A0A2A4JSU4   A0A0N1I9K7   A0A212FCC0   A0A2A4JU29   A0A194QKX0   A0A0L7L8F3   A0A212F161   A0A3S2P2D1   A0A2H1W9B8   A0A2H1WVP2   A0A194QPY2   A0A0N1IHN6   A0A212FJ74   A0A3S2LUZ6   A0A2A4KAY2   A0A2W1BG84   A0A194QJ23   A0A2A4J748   A0A212F9B1   H9J4R6   A0A194QJJ6   A0A2W1BFI0   A0A2H1WB04   A0A194QJ40   H9J4X0   H9J525   A0A0L7KZR3   H9J4S1   A0A0L7L8D8   A0A3S2NWF9   A0A2A4KA42   H9J4X1   A0A2W1B9E8   A0A2A4JNG3   A0A2H1V0I3   A0A0N1IG19   H9J4W9   A0A194QJ30   H9J4R7   A0A0L7LQ31   E0X905   A0A3S2LEF2   H9J4U8   A0A0L7LRT2   H9J4T7   A0A194QJ80   E0X906   D0PWZ5   A0A212F9C9   H9J4X3   H9J4S0   H9J4X2   Q17LS5   A0A2H1X0D6   A0A194QJ63   A0A182GTB3   A0A182GCQ0   H9J539   A0A2H1WKZ9   A0A0N1IPZ8   B0W5I2   A0A182MLS9   A0A2H1WFM1   A0A2A4JU31   A0A0N1IIX6   A0A182WKH8   A0A182PHI4   A0A2H1WK46   A0A0L7KM51   A0A2W1BDG5   A0A2A4J655   A0A2A4KB29   A0A3S2NLE7   A0A194QJ47   H9J4X4   A0A182Y162   A0A182NHP5   A0A139WGJ0   A0A084VC86   A0A182U3G7   A0A182RRX2   A0A194QKY0   A0A182KD28   A0A182XN09  

Pubmed

19121390    24730650    28756777    26354079    22118469    26227816    + More
17510324    26483478    25244985    18362917    19820115    24438588   

EMBL

BABH01025720    NWSH01000704    PCG74683.1    BABH01025717    ODYU01007122    SOQ49614.1    + More
PCG74682.1    KJ439227    KZ150491    AHX25878.1    PZC70688.1    KZ150249    PZC71835.1    NWSH01000578    PCG75536.1    ODYU01008354    SOQ51875.1    SOQ49615.1    KQ460077    KPJ17881.1    KQ458981    KPJ04505.1    KQ458671    KPJ05554.1    PCG74684.1    KPJ17880.1    AGBW02009205    OWR51384.1    PCG75537.1    KPJ05555.1    JTDY01002352    KOB71609.1    AGBW02010956    OWR47467.1    RSAL01000045    RVE50592.1    SOQ49613.1    ODYU01011356    SOQ57052.1    KPJ05561.1    KPJ17887.1    AGBW02008317    OWR53759.1    RSAL01000181    RVE44925.1    NWSH01000008    PCG80953.1    PZC71836.1    KPJ05558.1    NWSH01002771    PCG67556.1    AGBW02009614    OWR50324.1    BABH01035548    KPJ05559.1    KZ150133    PZC73021.1    ODYU01007347    SOQ50032.1    KPJ05573.1    BABH01025733    BABH01038881    JTDY01004123    KOB68566.1    BABH01035527    BABH01035528    BABH01035529    KOB71610.1    RVE50589.1    PCG80949.1    BABH01025731    PZC71838.1    NWSH01001042    PCG72950.1    ODYU01000118    SOQ34347.1    KPJ17891.1    KPJ05563.1    BABH01035544    JTDY01000342    KOB77618.1    GQ871755    ADM86146.1    RVE44926.1    BABH01035543    JTDY01000230    KOB78170.1    BABH01035469    KPJ05572.1    GQ871756    ADM86147.1    FJ373021    ACQ66002.1    OWR50323.1    BABH01025723    BABH01035538    BABH01035539    BABH01025724    CH477213    EAT47626.1    ODYU01012470    SOQ58795.1    KPJ05557.1    JXUM01086634    KQ563580    KXJ73638.1    JXUM01009472    KQ560284    KXJ83288.1    BABH01038877    BABH01038878    BABH01038879    BABH01038880    ODYU01009373    SOQ53753.1    KPJ17883.1    DS231843    EDS35465.1    AXCM01002831    SOQ51878.1    PCG75535.1    KPJ17884.1    ODYU01009098    SOQ53272.1    JTDY01008796    KOB64392.1    PZC71834.1    PCG67555.1    PCG80950.1    RVE50591.1    KPJ05583.1    KQ971345    KYB27009.1    ATLV01010625    KE524589    KFB35580.1    KPJ05560.1   

Proteomes

UP000005204    UP000218220    UP000053240    UP000053268    UP000007151    UP000037510    + More
UP000283053    UP000008820    UP000069940    UP000249989    UP000002320    UP000075883    UP000075920    UP000075885    UP000076408    UP000075884    UP000007266    UP000030765    UP000075902    UP000075900    UP000075881    UP000076407   

PRIDE

H9J4X6    H9J4X7    H9J4R6    H9J4X0    H9J525    H9J4S1    + More
H9J4X1    H9J4W9    H9J4R7    E0X905    H9J4U8    H9J4T7    E0X906    D0PWZ5    H9J4X3    H9J4S0    H9J4X2    H9J539    H9J4X4   

Pfam

PF00083   Sugar_tr

Interpro

IPR005828   MFS_sugar_transport-like        + More
IPR036259   MFS_trans_sf       
IPR020846   MFS_dom       
IPR005829   Sugar_transporter_CS       
IPR003663   Sugar/inositol_transpt       

SUPFAM

SSF103473   SSF103473       

CDD

cd06174  MFS

ProteinModelPortal

H9J4X6   A0A2A4JT91   H9J4X7   A0A2H1WAU6   A0A2A4JTG8   A0A023PNK9   + More
A0A2W1BD78   A0A2A4JUU3   A0A2H1WFL6   A0A2H1W936   A0A0N1IPS2   A0A194QHU0   A0A194QJI7   A0A2A4JSU4   A0A0N1I9K7   A0A212FCC0   A0A2A4JU29   A0A194QKX0   A0A0L7L8F3   A0A212F161   A0A3S2P2D1   A0A2H1W9B8   A0A2H1WVP2   A0A194QPY2   A0A0N1IHN6   A0A212FJ74   A0A3S2LUZ6   A0A2A4KAY2   A0A2W1BG84   A0A194QJ23   A0A2A4J748   A0A212F9B1   H9J4R6   A0A194QJJ6   A0A2W1BFI0   A0A2H1WB04   A0A194QJ40   H9J4X0   H9J525   A0A0L7KZR3   H9J4S1   A0A0L7L8D8   A0A3S2NWF9   A0A2A4KA42   H9J4X1   A0A2W1B9E8   A0A2A4JNG3   A0A2H1V0I3   A0A0N1IG19   H9J4W9   A0A194QJ30   H9J4R7   A0A0L7LQ31   E0X905   A0A3S2LEF2   H9J4U8   A0A0L7LRT2   H9J4T7   A0A194QJ80   E0X906   D0PWZ5   A0A212F9C9   H9J4X3   H9J4S0   H9J4X2   Q17LS5   A0A2H1X0D6   A0A194QJ63   A0A182GTB3   A0A182GCQ0   H9J539   A0A2H1WKZ9   A0A0N1IPZ8   B0W5I2   A0A182MLS9   A0A2H1WFM1   A0A2A4JU31   A0A0N1IIX6   A0A182WKH8   A0A182PHI4   A0A2H1WK46   A0A0L7KM51   A0A2W1BDG5   A0A2A4J655   A0A2A4KB29   A0A3S2NLE7   A0A194QJ47   H9J4X4   A0A182Y162   A0A182NHP5   A0A139WGJ0   A0A084VC86   A0A182U3G7   A0A182RRX2   A0A194QKY0   A0A182KD28   A0A182XN09  

PDB

4LDS     E-value=2.66498e-19,     Score=235

KEGG

101743252    K08145 MFS transporter, SP family, solute carrier family 2 (facilitated glucose transporter), member

GO

GO:0016021   GO:0022857   GO:0008643   GO:0005351   GO:0005887   GO:0008270   GO:0003676   GO:0016491   GO:0016651   GO:0046835   GO:0006281   GO:0006259   GO:0055085  

Length:

480

Number of predicted TMHs:

10

Exp number of AAs in TMHs:

227.26107

Exp number, first 60 AAs:

29.75827

Total prob of N-in:

0.99315

POSSIBLE N-term signal

sequence

inside

1  -  11

TMhelix

12  -  34

outside

35  -  53

TMhelix

54  -  73

inside

74  -  85

TMhelix

86  -  108

outside

109  -  138

TMhelix

139  -  161

inside

162  -  167

TMhelix

168  -  185

outside

186  -  254

TMhelix

255  -  277

inside

278  -  314

TMhelix

315  -  337

outside

338  -  346

TMhelix

347  -  366

inside

367  -  386

TMhelix

387  -  409

outside

410  -  412

TMhelix

413  -  435

inside

436  -  480

 

 

Pi

25.468389

Theta

26.685601

Tajima's D

-1.22176

CLR

0.000009

CSRT

0.100194990250487

Interpretation

Uncertain