Gene

KWMTBOMO16491  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA005634

Annotation

PREDICTED:_protein_shuttle_craft_[Bombyx_mori]

Location

Bomo_Scaf002(+):202076-213182      View in EpiBrowser

Full name

Protein shuttle craft      

Transcription factor

zf-NF-X1

Location in the cell

Extracellular   Reliability : 3.251

CDS

ATGTGCAGCAGCAAGCTACCGCAAGTGTGCGGGCGTCCTTGCCAACGCATGCTACAGTGCGGCGTACACAAATGCATGAAGGAATGCCACGAGGGTCCCTGTGAAGACTGCACCGAGTCTGTTACACAAGTATGCCATTGCCCGCTGGCCAAGACTCGTGAGGTCGCGTGCCGCGTGGAGTCGTCGTGGTCGTGCGGCGGCGCGTGCGGGCGCGTGCTATCGTGCGGCGCGCACGTGTGCCGGAGCACGTGCCACGAGCCCCCCTGCCCCTCCTGCGACCTGCTGCCTGCCGCCCTCATCACATGTCCGTGCGGGAAGACTAGAATACCAAAAGACAAACGCAAGTCGTGCACGGATCCGATCCCGTTGTGCGGAAACATCTGCGCCAAGCCGCTGCCCTGCGGCCCGGCCGGTGACAAGCATTTCTGCAAACTAGACTGTCATGAAGGTCCTTGTCCCGTTTGTCCTGACAAGACCTTATTGCCGTGCCGCTGTGGTCATTCGAACCGCGAGGTTCCGTGCGCTGAGCTACCGGACATGTATAACAATGTGTTCTGTCAGAAGAAATGTAATAAGAAACTGTCGTGCGGTCGACACCGTTGCCGCGCGTGCTGCTGCGCGGACCCGCAGCACCGGTGCGGGCTCGTGTGCGGGCGCTCGCTCGCCTGCCAGACGCACCGCTGTCAGGACTTCTGCCACACCGGACACTGCGCGCCGTGCCCCACGCTCAGCTTCGAGGAGCTGAGCTGTACGTGCGGGCGCGAGGTGCTGCTGCCGCCCGTGCGCTGCGGCACGCGGCCCCCGCCCTGCAGCGCGCCGTGCCGCCGCGCGCGCCCCTGCGGGCACGAGCCGCTGCACTCGTGCCACACCGGGGACTGTCCGCCCTGCGTCGTGCTCACCACCAGGACCTGCCACGGCGGACACGAGGAACGAAAAACCATCCCGTGTTCGCAAGAAGAGTTCTCGTGCGGCCTCCCGTGCGGCAAACCTCTCCCTTGCGGTAAACATACCTGCATCAAGGTCTGTCACAAGGGACCTTGCGATGCCGGCAAGTGCACCCAGCCGTGCAACGAGAAGCGTGCGAGCTGCGGGCACCCGTGCGGCGCCGCGTGCCACTCCGGCGCGGCGGGCGGCGCGGGCGCGCTGTGCCCGAGCGCGGCGCCGTGCCGCCGCACCGTGCGCGCCACGTGCCCCTGCAAACGGAAATCAGCCGAGAGACCTTGCTTCGAAAACGCACGGGATTACGATAAAATGATGAGTGCTCTTGCCGCCACCAAGATTCAGGAGGGAGGCTCTGTTGACTTGTCCGACGCACAGCGCGCCGTCAATATGCTCAAAACGCTGGAGTGCGACGACGAGTGCCGCGTGGAGGCGCGCACGCGGCAGATGGCGCTGGCGCTGCAGATCCGCAACCCGGACGTGTCCGCCAAGCTGGCGCCGCGCTACAGCGAGCACGTGCGCGCCACCGCCCAGCGCGAGCCCGCCTTCGCCTACCACGTGCACAACCAGCTCACCGAGCTCGTGCACCTCGCCAAGAAGTCGAAACAGAAGACGCGCTCGCACTCTTTCCCGTCGATGAACAGACAGAAGCGGCAGTTCATCCACGAGCTGTGCGAGCACTTCGGCTGCGAGAGCGTGGCCTACGACGCGGAGCCCAACAGGAACGTGGTGGCCACTGCCGACAAGGAGAAGTCGTGGTTGCCGGCGATGAGCATAATGGAAGTGTTGTCGCGTGAGGCGGGCCGGCGGCGCGTGCCCGGCCCCGTGCTGCGGACCGCGCACTCCTCCGCCGCCTCTTCAGCCTCGACGACCTCCTCCTCCGCCGCTAACAAGTAA

Protein

MCSSKLPQVCGRPCQRMLQCGVHKCMKECHEGPCEDCTESVTQVCHCPLAKTREVACRVESSWSCGGACGRVLSCGAHVCRSTCHEPPCPSCDLLPAALITCPCGKTRIPKDKRKSCTDPIPLCGNICAKPLPCGPAGDKHFCKLDCHEGPCPVCPDKTLLPCRCGHSNREVPCAELPDMYNNVFCQKKCNKKLSCGRHRCRACCCADPQHRCGLVCGRSLACQTHRCQDFCHTGHCAPCPTLSFEELSCTCGREVLLPPVRCGTRPPPCSAPCRRARPCGHEPLHSCHTGDCPPCVVLTTRTCHGGHEERKTIPCSQEEFSCGLPCGKPLPCGKHTCIKVCHKGPCDAGKCTQPCNEKRASCGHPCGAACHSGAAGGAGALCPSAAPCRRTVRATCPCKRKSAERPCFENARDYDKMMSALAATKIQEGGSVDLSDAQRAVNMLKTLECDDECRVEARTRQMALALQIRNPDVSAKLAPRYSEHVRATAQREPAFAYHVHNQLTELVHLAKKSKQKTRSHSFPSMNRQKRQFIHELCEHFGCESVAYDAEPNRNVVATADKEKSWLPAMSIMEVLSREAGRRRVPGPVLRTAHSSAASSASTTSSSAANK

Similarity

Belongs to the NFX1 family.

Keywords

Alternative splicing   Complete proteome   DNA-binding   Metal-binding   Nucleus   Phosphoprotein   Reference proteome   Repeat   RNA-binding   Transcription   Transcription regulation   Zinc   Zinc-finger  

Feature

chain  Protein shuttle craft
splice variant  In isoform B.

Uniprot

H9J7Z2   A0A2A4K355   A0A2A4K2T6   A0A3S2LJM5   A0A2H1V9F9   A0A194QGR9   + More
A0A194QXJ0   A0A212EP74   L7X1P9   D0AB98   A0A2P8Z3T6   D6WMN1   A0A139WHD1   A0A2J7QGB1   A0A2J7QGA5   A0A1B6EVN5   A0A1B6JPB1   E0VEM9   A0A1B6KND9   A0A2A3E3N7   A0A088ART8   A0A067R6D8   W8APS1   A0A026WYJ9   A0A195C826   A0A1Y1JZ76   E2C3V1   F4WM20   V5GY42   A0A0L7RDI2   A0A0L0CJR7   A0A1B0GP93   A0A195FUE9   A0A154PBD9   B4MZE5   A0A0M4E2B7   A0A1I8Q8G4   E8NH79   A0A034VNI7   A0A0P4VKR5   A0A0A1X737   A0A0V0G909   A0A224XHM8   A0A069DY12   T1P9M2   A0A1Q3FEQ8   B3MM96   A0A1Q3FEQ0   A0A1Q3FCB1   A0A1I8N6H3   A0A1I8N6G0   B4NYD7   A0A1W4WC55   A0A0A9ZGP6   A0A1B0A839   A0A1B0FP18   A0A146LIZ1   A0A3B0KT64   A0A1A9V167   Q29P77   B3N5P4   B4KLB0   B4GK89   A0A1A9X8Y5   B4LRX1   A0A0M3QTY5   A0A1B0BFJ2   A0A1B0CN35   A0A3B0L0K6   A0A1A9X299   M9PDG3   P40798-2   A0A310SMP3   M9PD57   B0W1A0   P40798   A0A182KWI0   A0A182MHE8   A0A0K8V596   A0A0J9R264   A0A0J9R2N5   Q17KM1   B4HXM6   T1IAW5   E9H0P6   W5JVC9   A0A2M4AEV2   A0A182F3S3   B4JAX9   A0A023EY35   A0A0P5VH86   A0A182PVX0   A0A0P5YM02   B4Q602   A0A0P5XCR0   A0A182H838   A0A0P5A3Q8   B4LWS2   A0A0P5AUP1   A0A084VMJ6  

Pubmed

19121390    26354079    22118469    23674305    29403074    18362917    + More
19820115    20566863    24845553    24495485    24508170    28004739    20798317    21719571    26108605    17994087    25348373    27129103    25830018    26334808    25315136    17550304    25401762    26823975    15632085    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    8524296    10471707    10731138    18327897    20966253    22936249    17510324    21292972    20920257    23761445    24945155    26483478    24438588   

EMBL

BABH01020191    BABH01020192    NWSH01000227    PCG78213.1    PCG78214.1    RSAL01000090    + More
RVE48091.1    ODYU01001380    SOQ37468.1    KQ459232    KPJ02641.1    KQ461155    KPJ08291.1    AGBW02013517    OWR43279.1    KC469893    AGC92703.2    FP102340    CBH09293.1    PYGN01000208    PSN51156.1    KQ971343    EFA04758.2    KYB27326.1    NEVH01014379    PNF27624.1    PNF27625.1    GECZ01027838    JAS41931.1    GECU01009311    GECU01006610    JAS98395.1    JAT01097.1    DS235093    EEB11835.1    GEBQ01027027    JAT12950.1    KZ288427    PBC25866.1    KK852714    KDR17911.1    GAMC01020057    GAMC01020055    JAB86498.1    KK107064    EZA60846.1    KQ978220    KYM96321.1    GEZM01096724    JAV54622.1    GL452364    EFN77337.1    GL888217    EGI64664.1    GALX01003148    JAB65318.1    KQ414614    KOC68840.1    JRES01000305    KNC32491.1    AJVK01033236    AJVK01033237    KQ981264    KYN44046.1    KQ434856    KZC08714.1    CH963913    EDW77484.2    CP012523    ALC39716.1    BT125955    ADX35934.1    GAKP01015839    JAC43113.1    GDKW01003695    JAI52900.1    GBXI01007360    JAD06932.1    GECL01001450    JAP04674.1    GFTR01008466    JAW07960.1    GBGD01000277    JAC88612.1    KA645427    AFP60056.1    GFDL01009011    JAV26034.1    CH902620    EDV31856.1    GFDL01009025    JAV26020.1    GFDL01009855    JAV25190.1    CM000157    EDW89773.1    GBHO01007718    GBHO01000278    JAG35886.1    JAG43326.1    CCAG010018380    GDHC01011747    JAQ06882.1    OUUW01000040    SPP89929.1    CH379058    EAL34416.2    CH954177    EDV58003.1    CH933807    EDW11771.1    CH479184    EDW37055.1    CH940649    EDW63647.1    ALC39723.1    JXJN01013499    AJWK01019755    SPP89928.1    AE014134    AGB92995.1    U09306    AF145679    KQ760869    OAD58748.1    AGB92996.1    DS231821    EDS44970.1    AXCM01000660    GDHF01018212    GDHF01005212    JAI34102.1    JAI47102.1    CM002910    KMY90342.1    KMY90343.1    CH477223    EAT47205.1    CH480818    EDW51806.1    ACPB03000855    GL732581    EFX74683.1    ADMH02000386    ETN66754.1    GGFK01006000    MBW39321.1    CH916368    EDW02849.1    GAPW01000154    JAC13444.1    GDIP01115026    JAL88688.1    GDIP01055985    JAM47730.1    CM000361    EDX05105.1    GDIP01074037    JAM29678.1    JXUM01028608    JXUM01028609    JXUM01028610    KQ560826    KXJ80724.1    GDIP01207964    JAJ15438.1    CH940650    EDW66643.2    GDIP01208014    JAJ15388.1    ATLV01014599    KE524975    KFB39190.1   

Proteomes

UP000005204    UP000218220    UP000283053    UP000053268    UP000053240    UP000007151    + More
UP000245037    UP000007266    UP000235965    UP000009046    UP000242457    UP000005203    UP000027135    UP000053097    UP000078542    UP000008237    UP000007755    UP000053825    UP000037069    UP000092462    UP000078541    UP000076502    UP000007798    UP000092553    UP000095300    UP000007801    UP000095301    UP000002282    UP000192221    UP000092445    UP000092444    UP000268350    UP000078200    UP000001819    UP000008711    UP000009192    UP000008744    UP000092443    UP000008792    UP000092460    UP000092461    UP000091820    UP000000803    UP000002320    UP000075882    UP000075883    UP000008820    UP000001292    UP000015103    UP000000305    UP000000673    UP000069272    UP000001070    UP000075885    UP000000304    UP000069940    UP000249989    UP000030765   

PRIDE

H9J7Z2    E8NH79    P40798   

Pfam

PF01424   R3H        + More
PF01422   zf-NF-X1

Interpro

IPR034076   R3H_NF-X1        + More
IPR034078   NFX1_fam       
IPR001374   R3H_dom       
IPR019787   Znf_PHD-finger       
IPR036867   R3H_dom_sf       
IPR019786   Zinc_finger_PHD-type_CS       
IPR001841   Znf_RING       
IPR000967   Znf_NFX1       

SUPFAM

SSF82708   SSF82708       

Gene 3D

3.30.1370.50    

CDD

cd02643  R3H_NF-X1

ProteinModelPortal

H9J7Z2   A0A2A4K355   A0A2A4K2T6   A0A3S2LJM5   A0A2H1V9F9   A0A194QGR9   + More
A0A194QXJ0   A0A212EP74   L7X1P9   D0AB98   A0A2P8Z3T6   D6WMN1   A0A139WHD1   A0A2J7QGB1   A0A2J7QGA5   A0A1B6EVN5   A0A1B6JPB1   E0VEM9   A0A1B6KND9   A0A2A3E3N7   A0A088ART8   A0A067R6D8   W8APS1   A0A026WYJ9   A0A195C826   A0A1Y1JZ76   E2C3V1   F4WM20   V5GY42   A0A0L7RDI2   A0A0L0CJR7   A0A1B0GP93   A0A195FUE9   A0A154PBD9   B4MZE5   A0A0M4E2B7   A0A1I8Q8G4   E8NH79   A0A034VNI7   A0A0P4VKR5   A0A0A1X737   A0A0V0G909   A0A224XHM8   A0A069DY12   T1P9M2   A0A1Q3FEQ8   B3MM96   A0A1Q3FEQ0   A0A1Q3FCB1   A0A1I8N6H3   A0A1I8N6G0   B4NYD7   A0A1W4WC55   A0A0A9ZGP6   A0A1B0A839   A0A1B0FP18   A0A146LIZ1   A0A3B0KT64   A0A1A9V167   Q29P77   B3N5P4   B4KLB0   B4GK89   A0A1A9X8Y5   B4LRX1   A0A0M3QTY5   A0A1B0BFJ2   A0A1B0CN35   A0A3B0L0K6   A0A1A9X299   M9PDG3   P40798-2   A0A310SMP3   M9PD57   B0W1A0   P40798   A0A182KWI0   A0A182MHE8   A0A0K8V596   A0A0J9R264   A0A0J9R2N5   Q17KM1   B4HXM6   T1IAW5   E9H0P6   W5JVC9   A0A2M4AEV2   A0A182F3S3   B4JAX9   A0A023EY35   A0A0P5VH86   A0A182PVX0   A0A0P5YM02   B4Q602   A0A0P5XCR0   A0A182H838   A0A0P5A3Q8   B4LWS2   A0A0P5AUP1   A0A084VMJ6  

KEGG

101741751    K12236 transcriptional repressor NF-X1 | (RefSeq) protein shuttle craft

GO

GO:0005634   GO:0003700   GO:0008270   GO:0003676   GO:0006355   GO:0000981   GO:0000122   GO:0000977   GO:0003723   GO:0003677   GO:0016491   GO:0016651   GO:0046835   GO:0006281   GO:0006259  

PANTHER

PTHR12360  

Subcellular location

Nucleus  

Length:

611

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00038

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00063

outside

1  -  611

 

 

Pi

24.776219

Theta

36.513728

Tajima's D

-0.979608

CLR

0.012208

CSRT

0.140742962851857

Interpretation

Uncertain