Gene

KWMTBOMO16489

Pre Gene Modal

BGIBMGA005568

Annotation

putative_NADH-ubiquinone_oxidoreductase_75_kDa_subunit?_mitochondrial_[Operophtera_brumata]

Location

Bomo_Scaf002(-):182730-184925      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.17 PlasmaMembrane   Reliability : 1.766

CDS

ATGTTTAGATTTGCGAGAGAATCATTAACGAAGTTCCAGAAAAATCTTCAAAATGTTGTTAATAGGAGACAGTCAACGCAAGAAATTGATATATTCATTAATGGAAAACCCGTTAAGGTGCCCAGCTACTTCACAATATTACAAGCTTTACGTCGCGAGAAATTGACTGTGCCCACTTTTTGTTATCACGAACGTCTCTCCATTGCTGGTAACTGTAGAATGTGTTTGGTCGAATTAGAAGGCCTGTCAAAGTCACAGGTAGCTTGCGCCATGCCCGTGTCGAAGAACATGAAAATACGAACAAACTCCGCTAAAACCCAAACGGCTCAAGAAGGTGTACTAGAATTTCTACTTGTTAATCATCCATTAGATTGTCCTATTTGTGACCAAGGAGGTGAATGTGATTTGCAAGATCTATCGATGAGATTCGGCAATGACCGTTCAAGGTTTACTGACGTACATTTCGACGGAAAAAGAGCAGTCGAAGATAAAAATTTAGGGCCCTTAATACGAACAGAAATGACTCGTTGCATTCACTGTACTAGATGCATCAGGTTCGCTTCACAAGTTTGTGGCTTGGATGTTTTAGGTACTGCGGGGCGAGGCACTGAAATGCTTGTTGGTACTTATGTCGATAAGATGTTTTTATCTGAGTTATCTGGAAACATCATTGACTTGTGTCCTGTGGGAGCTTTAACATCGATGCCTTACATGTTCAAAGCAAGACCTTGGGAAGTACGGAGAACCAATTCCATTGACGTTACAGATGCAACCGGTACTAATATTGTAATAAATCATAGATTTGATCGTGTTTTAAGGATACTCCCTCGGGAGCACGATGAAATAAACCAAGAATGGCTTTCCGATAAAGGACGGTGGGCCATGGATTCACTTGAAATACAAAGATTAGTGACCCCTATGCTCAGAGTTGGTTCTTGTTTATGTCCTATCGAATGGAATTGTGCGTTGAAAACCGTTGCAGACTCGATAAATTGTACTTGTCCAGAAAATGTAATGGCTATTGCCGGTCCCCATTGTAATGTTGAAACTTTGGTAGCGGCCAAAGACTTTTTAAATATGTTAGGTTCAGAAAACACGTACGTCGAGCGCGGGATGTATTATACACAAACGGGAGCTGATATAAGAGCGGCGTATTCTTTAAATGTAAACATGAGGGATATAGCTCAAGCCGATATAATTTTACTAGTTGGAACCAACCCGAGATTCGAGGCTCCTATTTTGAATGCATGGATCCGACAAGCCTATATTACAAACGAGTGCGATATTTATGTAATAGGTCCTCGATGCGAGTTCAATTATTTTGTCAACTATTTAGGCGATGATATACAATCATTAAGTAAAGCTAGTGAAGTATTAAAAGAAGCTAAAAAACCACTTATTTTAGTTGGAATTTCACAACTGGAATCGGCATTTGGTGGGAAAATCATGAAAGAATTGACTAATATTGCAGCTTCATTTAAGGTAAACAATTGGTCAGTTTTGAATATTGTAACGCGAGAGGCTAGTTTTGCCGGTGCGTTAGAAGCTGGTTGGAAGCCGGGAGCTTTAGCAGCATTACAAGAAAAATGCCCAGATGTTTTGATATCATTGGGTGCTGATGAAATATTTTATAACTGGTCGCCACCACAGTCATGTAAACTTATTTATATAGGTTTTCAAGGTGATAAAGGTTCGGAGAATGCATCTATCGTTTTGCCGGGAAGTGCTTACACCGAAGCCGGTGGATTATATTTGAATATGGAGGGTAGATCTCAACACGCACTTCCTGCAGTCACACCGCCAGGGAAAGCGCGTCACGATTGGAAGATTATACGGGCTTTAGCGGAATATACTGGGATATGTTTGTTCTACAGCGATCACAGTTCTTTATCCTGTCGTCTGTCTCAAGTGAGCCCTAATTTCGTACATTTGGGAAAGTATCAGGATAAATTATTCAGTGACTTGATTGCCCCTCTTATTTGTTCGGATAGCAGTGCGAATGGTAAACTTAATGTCGACATGAAGACTCTGGTTGATTATTATTGTACCGATGTGTTTACTTACAACTCTACGACGATGATAAAGGCCCAGAAAGCTGCAGCAGAGCTTGCGAAATCTAGTTACGCTTGCGTGTAA

Protein

MFRFARESLTKFQKNLQNVVNRRQSTQEIDIFINGKPVKVPSYFTILQALRREKLTVPTFCYHERLSIAGNCRMCLVELEGLSKSQVACAMPVSKNMKIRTNSAKTQTAQEGVLEFLLVNHPLDCPICDQGGECDLQDLSMRFGNDRSRFTDVHFDGKRAVEDKNLGPLIRTEMTRCIHCTRCIRFASQVCGLDVLGTAGRGTEMLVGTYVDKMFLSELSGNIIDLCPVGALTSMPYMFKARPWEVRRTNSIDVTDATGTNIVINHRFDRVLRILPREHDEINQEWLSDKGRWAMDSLEIQRLVTPMLRVGSCLCPIEWNCALKTVADSINCTCPENVMAIAGPHCNVETLVAAKDFLNMLGSENTYVERGMYYTQTGADIRAAYSLNVNMRDIAQADIILLVGTNPRFEAPILNAWIRQAYITNECDIYVIGPRCEFNYFVNYLGDDIQSLSKASEVLKEAKKPLILVGISQLESAFGGKIMKELTNIAASFKVNNWSVLNIVTREASFAGALEAGWKPGALAALQEKCPDVLISLGADEIFYNWSPPQSCKLIYIGFQGDKGSENASIVLPGSAYTEAGGLYLNMEGRSQHALPAVTPPGKARHDWKIIRALAEYTGICLFYSDHSSLSCRLSQVSPNFVHLGKYQDKLFSDLIAPLICSDSSANGKLNVDMKTLVDYYCTDVFTYNSTTMIKAQKAAAELAKSSYACV

Similarity

Belongs to the complex I 75 kDa subunit family.

Uniprot

H9J7S6   A0A0L7K4G2   A0A3S2TJU3   A0A2A4K1R7   A0A194QB00   A0A194QTG0   + More
A0A2H1V9G5   A0A212FD95   A0A2H1WGT5   A0A194Q2T0   D6WVN8   E9FYW9   A0A2W1BXT8   A0A0P5BJ82   A0A2A4JWH4   A0A0P6F6M0   A0A0P6AFW5   A0A0P4WX13   A0A0P5JWP1   A0A182SRZ5   A0A0N8AP74   H9JHG0   A0A182WSL6   A0A2C9GQP9   A0A182TLR1   A0A182L9V4   Q7PXY3   A0A2A3E2W2   A0A182PGJ9   A0A0K8TL41   A0A182VBA7   A0A0L7R4U3   J3JZ82   U4USC0   A0A1L8E1A1   A0A182JYV9   A0A1L8E0Q7   A0A0P6G8E9   A0A084WPQ6   E2AUE4   A0A1L8E0U9   A0A226EK77   A0A0K8VPQ5   A0A0V0G757   A0A182VZF8   A0A1A9WX49   A0A0K8USY1   A0A182YB51   A0A182MRG7   A0A034WDL1   A0A1B6EGX1   A0A182RZA0   A0A182JC64   A0A164WP08   A0A0P5XMI3   A0A1Y1NKK2   A0A0J7KS69   A0A2M4A4S5   A0A182N3Z9   A0A1B0GP68   A0A0A1WQ44   A0A195CPY7   A0A0P4W3D4   A0A151JVF0   A0A0T6AUX2   A0A2J7R616   A0A0L8IF50   A0A182FMI2   A0A2M4BF83   A0A151WVB1   T1FN77   A0A151J914   V9IKK8   A0A182QFB8   T1E710   W5JLE0   U5EWU1   Q29FR7   A0A1J1HXL3   A0A0P5G678   W5MY33   A0A195BJI3   U5EIM0   A0A0P5K9E0   A0A0M8ZNA4   E0VE52   A0A224XJ10   A0A0P4WLN3   A0A026VYK1   E9J1P4   A0A154P7K9   A0A1B0GEG7   A0A2M3YZ75   T1HUG6   W8B5N8   A0A1W4X8X9   A0A1W4XJ55   A0A3B0K955   A0A182IMF1   W4YD16  

Pubmed

19121390    26227816    26354079    22118469    18362917    19820115    + More
21292972    28756777    20966253    12364791    14747013    17210077    26369729    22516182    23537049    24438588    20798317    25244985    25348373    28004739    25830018    27129103    23254933    20920257    23761445    15632085    17994087    20566863    24508170    30249741    21282665    24495485   

EMBL

BABH01020190    JTDY01010611    KOB58158.1    RSAL01000090    RVE48088.1    NWSH01000227    + More
PCG78211.1    KQ459232    KPJ02642.1    KQ461155    KPJ08290.1    ODYU01001380    SOQ37469.1    AGBW02009093    OWR51700.1    ODYU01008542    SOQ52237.1    KQ459562    KPI99867.1    KQ971357    EFA09221.1    GL732527    EFX87607.1    KZ149902    PZC78454.1    GDIP01184276    JAJ39126.1    NWSH01000489    PCG76048.1    GDIQ01060543    JAN34194.1    GDIP01029992    JAM73723.1    GDIP01252115    JAI71286.1    GDIQ01197951    JAK53774.1    GDIQ01256467    JAJ95257.1    BABH01012504    BABH01012505    BABH01012506    BABH01012507    APCN01000898    AAAB01008987    EAA00921.4    EGK97518.1    KZ288445    PBC25652.1    GDAI01002544    JAI15059.1    KQ414654    KOC65900.1    APGK01035707    BT128563    KB740928    AEE63520.1    ENN77918.1    KB632428    ERL95413.1    GFDF01001809    JAV12275.1    GFDF01001807    JAV12277.1    GDIQ01037043    JAN57694.1    ATLV01025119    KE525369    KFB52200.1    GL442815    EFN63001.1    GFDF01001808    JAV12276.1    LNIX01000003    OXA58105.1    GDHF01011491    GDHF01001581    JAI40823.1    JAI50733.1    GECL01002957    JAP03167.1    GDHF01022532    GDHF01018974    JAI29782.1    JAI33340.1    AXCM01002120    GAKP01007074    JAC51878.1    GEDC01000123    JAS37175.1    LRGB01001151    KZS13443.1    GDIP01069939    JAM33776.1    GEZM01003715    GEZM01003714    JAV96616.1    LBMM01003841    KMQ93064.1    GGFK01002495    MBW35816.1    AJVK01005738    AJVK01005739    AJVK01005740    AJVK01005741    AJVK01005742    AJVK01005743    AJVK01005744    AJVK01005745    GBXI01013652    JAD00640.1    KQ977513    KYN02174.1    GDKW01000637    JAI55958.1    KQ981701    KYN37487.1    LJIG01022746    KRT78931.1    NEVH01006983    PNF36272.1    KQ415854    KOG00068.1    GGFJ01002563    MBW51704.1    KQ982708    KYQ51794.1    AMQM01005159    KB096830    ESO01146.1    KQ979480    KYN21274.1    JR050215    AEY61202.1    AXCN02002451    GAMD01003432    JAA98158.1    ADMH02000836    ETN64916.1    GANO01001256    JAB58615.1    CH379065    EAL31512.2    CVRI01000020    CRK91262.1    GDIQ01250484    JAK01241.1    AHAT01034460    KQ976453    KYM85333.1    GANO01002580    JAB57291.1    GDIQ01213401    JAK38324.1    KQ435989    KOX67705.1    DS235088    EEB11658.1    GFTR01007854    JAW08572.1    GDRN01062949    JAI65029.1    KK107570    QOIP01000005    EZA48847.1    RLU23102.1    GL767674    EFZ13242.1    KQ434831    KZC07823.1    CCAG010012255    GGFM01000823    MBW21574.1    ACPB03005194    GAMC01017954    JAB88601.1    OUUW01000018    SPP89212.1    AAGJ04030728    AAGJ04030729   

Proteomes

UP000005204    UP000037510    UP000283053    UP000218220    UP000053268    UP000053240    + More
UP000007151    UP000007266    UP000000305    UP000075901    UP000076407    UP000075840    UP000075902    UP000075882    UP000007062    UP000242457    UP000075885    UP000075903    UP000053825    UP000019118    UP000030742    UP000075881    UP000030765    UP000000311    UP000198287    UP000075920    UP000091820    UP000076408    UP000075883    UP000075900    UP000075880    UP000076858    UP000036403    UP000075884    UP000092462    UP000078542    UP000078541    UP000235965    UP000053454    UP000069272    UP000075809    UP000015101    UP000078492    UP000075886    UP000000673    UP000001819    UP000183832    UP000018468    UP000078540    UP000053105    UP000009046    UP000053097    UP000279307    UP000076502    UP000092444    UP000015103    UP000192223    UP000268350    UP000007110   

PRIDE

H9J7S6    H9JHG0   

Pfam

PF10588   NADH-G_4Fe-4S_3        + More
PF00384   Molybdopterin
PF09326   NADH_dhqG_C
PF14964   DUF4507
PF14639   YqgF
PF14641   HTH_44
PF14632   SPT6_acidic
PF14635   HHH_7
PF00575   S1
PF14633   SH2_2

Interpro

IPR036010   2Fe-2S_ferredoxin-like_sf        + More
IPR001041   2Fe-2S_ferredoxin-type       
IPR006656   Mopterin_OxRdtase       
IPR010228   NADH_UbQ_OxRdtase_Gsu       
IPR000283   NADH_UbQ_OxRdtase_75kDa_su_CS       
IPR019574   NADH_UbQ_OxRdtase_Gsu_4Fe4S-bd       
IPR006963   Mopterin_OxRdtase_4Fe-4S_dom       
IPR015405   NuoG_C       
IPR027844   DUF4507       
IPR003029   S1_domain       
IPR028083   Spt6_acidic_N_dom       
IPR028231   Spt6_YqgF       
IPR006641   YqgF/RNaseH-like_dom       
IPR022967   S1_dom       
IPR028088   Spt6_HTH_DNA-bd_dom       
IPR035018   Spt6_SH2_C       
IPR032706   Spt6_HHH       
IPR017072   TF_Spt6       
IPR012340   NA-bd_OB-fold       
IPR036860   SH2_dom_sf       
IPR035420   Spt6_SH2       
IPR035019   Spt6_SH2_N       
IPR012337   RNaseH-like_sf       
IPR000980   SH2       
IPR010994   RuvA_2-like       

SUPFAM

SSF54292   SSF54292        + More
SSF47781   SSF47781       
SSF53098   SSF53098       
SSF50249   SSF50249       
SSF55550   SSF55550       

Gene 3D

3.30.505.10    

CDD

cd00207  fer2
cd09928  SH2_Cterm_SPT6_like
cd09918  SH2_Nterm_SPT6_like

ProteinModelPortal

H9J7S6   A0A0L7K4G2   A0A3S2TJU3   A0A2A4K1R7   A0A194QB00   A0A194QTG0   + More
A0A2H1V9G5   A0A212FD95   A0A2H1WGT5   A0A194Q2T0   D6WVN8   E9FYW9   A0A2W1BXT8   A0A0P5BJ82   A0A2A4JWH4   A0A0P6F6M0   A0A0P6AFW5   A0A0P4WX13   A0A0P5JWP1   A0A182SRZ5   A0A0N8AP74   H9JHG0   A0A182WSL6   A0A2C9GQP9   A0A182TLR1   A0A182L9V4   Q7PXY3   A0A2A3E2W2   A0A182PGJ9   A0A0K8TL41   A0A182VBA7   A0A0L7R4U3   J3JZ82   U4USC0   A0A1L8E1A1   A0A182JYV9   A0A1L8E0Q7   A0A0P6G8E9   A0A084WPQ6   E2AUE4   A0A1L8E0U9   A0A226EK77   A0A0K8VPQ5   A0A0V0G757   A0A182VZF8   A0A1A9WX49   A0A0K8USY1   A0A182YB51   A0A182MRG7   A0A034WDL1   A0A1B6EGX1   A0A182RZA0   A0A182JC64   A0A164WP08   A0A0P5XMI3   A0A1Y1NKK2   A0A0J7KS69   A0A2M4A4S5   A0A182N3Z9   A0A1B0GP68   A0A0A1WQ44   A0A195CPY7   A0A0P4W3D4   A0A151JVF0   A0A0T6AUX2   A0A2J7R616   A0A0L8IF50   A0A182FMI2   A0A2M4BF83   A0A151WVB1   T1FN77   A0A151J914   V9IKK8   A0A182QFB8   T1E710   W5JLE0   U5EWU1   Q29FR7   A0A1J1HXL3   A0A0P5G678   W5MY33   A0A195BJI3   U5EIM0   A0A0P5K9E0   A0A0M8ZNA4   E0VE52   A0A224XJ10   A0A0P4WLN3   A0A026VYK1   E9J1P4   A0A154P7K9   A0A1B0GEG7   A0A2M3YZ75   T1HUG6   W8B5N8   A0A1W4X8X9   A0A1W4XJ55   A0A3B0K955   A0A182IMF1   W4YD16  

PDB

5XTI     E-value=0,     Score=1690

KEGG

101741611    K03934 NADH dehydrogenase (ubiquinone) Fe-S protein 1 [EC:7.1.1.2 1.6.99.3] | (RefSeq) NADH-ubiquino

PATHWAY

00190    Oxidative phosphorylation - Bombyx mori (domestic silkworm)
01100    Metabolic pathways - Bombyx mori (domestic silkworm)

GO

GO:0008137   GO:0009055   GO:0016020   GO:0042773   GO:0051536   GO:0051539   GO:0005747   GO:0045333   GO:0045272   GO:0016021   GO:0006139   GO:0003677   GO:0032968   GO:0005739   GO:0016491   GO:0016651   GO:0046835   GO:0006281   GO:0006259   GO:0055114  

PANTHER

PTHR10145  

Length:

711

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.0219899999999999

Exp number, first 60 AAs:

0.00311

Total prob of N-in:

0.00109

outside

1  -  711

 

 

Pi

17.573289

Theta

31.67736

Tajima's D

-1.40232

CLR

0.145942

CSRT

0.0711964401779911

Interpretation

Uncertain