SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO16486
Pre Gene Modal
BGIBMGA005633
Annotation
PREDICTED:_thrombospondin_type-1_domain-containing_protein_7A-like_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 2.165
 

Sequence

CDS
ATGAAAGTTGACTGCGCTCTTGGAGAATGGCTTCCTTGGAGGCCCAGATCAGACGGAGCCCTTGTACGGACTAGACGCCTGAAACGACTTCCAATAGGTGGTGGTGTGGAGTGCGACGTGGTAGAGGAAGTTCGTCCAGCGGCTATGGAAGCGAGTGCTCATTGGGTACCGGGCGCTTGGGGACCATGCCGTGTTGCCATCGAGACCACGGCACCTCTGCCTCCCGTCAACAATGACGATGATGATGATTTGGATAATGACGCAAACTACGACGAGGACGACGATGATGATGATGATGATGACTCAGATGACGACAAAGACTCTGAAGCGAGCTGCGGTGGTGGGGTTCAACGGCGGGAAGCTACGTGCGTGCGAGCTGATGGAAGAGCTCTGCATCCGGCTCAATGCGCTCATGCTCTCATGCCAACACTAGTCCAACCTTGTGAGGTTAGCGAACCTTAA
Protein
MKVDCALGEWLPWRPRSDGALVRTRRLKRLPIGGGVECDVVEEVRPAAMEASAHWVPGAWGPCRVAIETTAPLPPVNNDDDDDLDNDANYDEDDDDDDDDDSDDDKDSEASCGGGVQRREATCVRADGRALHPAQCAHALMPTLVQPCEVSEP

Summary

Pfam
PF00090   TSP_1
Interpro
IPR000884   TSP1_rpt        + More
IPR036383   TSP1_rpt_sf       
SUPFAM
SSF82895   SSF82895       
Gene 3D

Ontologies

Topology

Length:
153
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00018
Exp number, first 60 AAs:
0
Total prob of N-in:
0.12713
outside
1  -  153
 
 

Population Genetic Test Statistics

Pi
31.699327
Theta
40.095418
Tajima's D
-0.630619
CLR
0
CSRT
0.215639218039098
Interpretation
Uncertain
Copyright@ 2018-2023    Any Comments and suggestions mail to:zhuzl@cqu.edu.cn   渝ICP备19006517号

渝公网安备 50010602502065号