SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO16474
Pre Gene Modal
BGIBMGA002227
Annotation
olfactory_receptor_7_[Bombyx_mori]
Full name
Odorant receptor      
Location in the cell
PlasmaMembrane   Reliability : 4.905
 

Sequence

CDS
ATGACCTACATATTCTCTTTTTCCATTTTCGTCTGTGTGGTCACTTTTAACCTGAACCCGGTTTTCAACAATATCGGGTCGGGTGCATACAAGAATCCCCGACCAGACAACGTGACCTTGCAGCAATGCGTGTATTACGCACTCCCCTTTGACTACACGGGAGATTTCAAATGGTACATGCTGGTGGCCATCTTTAACGTACAGAAAACATTTTTCTGCACCTCACTGTTTATATTATTTGATTTATTACTGTCCATGATGATAATACACTTGTGGGGTCATATCCGGATCTTTATCCACAATTTGAACCACATACCGGCGCCTCGTAACTCCTTGGAGTACACAAGAGAAGAGAGACAAGAAGTGGATAATACGCTGAAGAAGTGCATTCAACACCACACTTTAATAATAGGATTTGTTCGCATAATGTCTGAGACGTACGGTCTGGCGGTCCTCATCTATTACGCTTTCCAGCAAGTGGTTGGATGCTTGTTGCTGTTGCAATGTTCACGACTGGATTTGAAAACTATCACGCGATTTGGATTTTTGACTACTATGGTAAATCAACAATTAATTCAAATATCGGTCATATTTGAGCTTCTAGGGTATATGGTAAGTTGCTTTATTGCCTTGGAAGATATGTACGATGATAGTATTATTGAGAGATGA
Protein
MTYIFSFSIFVCVVTFNLNPVFNNIGSGAYKNPRPDNVTLQQCVYYALPFDYTGDFKWYMLVAIFNVQKTFFCTSLFILFDLLLSMMIIHLWGHIRIFIHNLNHIPAPRNSLEYTREERQEVDNTLKKCIQHHTLIIGFVRIMSETYGLAVLIYYAFQQVVGCLLLLQCSRLDLKTITRFGFLTTMVNQQLIQISVIFELLGYMVSCFIALEDMYDDSIIER

Summary

Similarity
Belongs to the insect chemoreceptor superfamily. Heteromeric odorant receptor channel (TC 1.A.69) family.
EMBL
AJ874109    CAI43913.1    AJ874108    CAI43912.1    AB186507    BAD89569.1    + More
FN556592    CBH19583.1    FN556591    CBH19582.1    AB472092    BAH66309.1    AB186509    BAG12808.1    BK005919    DAA05969.1    AB186506    BAD89568.1    KC299918    AGH58121.1    AB263205    BAG71423.2    KY660035    AUY55140.1    GENK01000051    JAV45862.1    AJ748328    CAG38114.1    KC960474    AGY14585.2    KJ542667    AJD81551.1    KC188668    AGI96750.1    KF768667    AIG51861.1    EU979116    ACL81181.1    ODYU01000580    SOQ35608.1    GQ165718    ACS45304.1    GQ165721    ACS45307.1    FJ393455    ACJ12370.1    AJ874106    CAI43910.1    AB101293    BAD69586.1    AB059431    BAD69584.1    GQ246496    ACT34880.1    KC526967    AGS41443.1    KJ542669    AJD81553.1    JN835269    AEY84942.2    HM595405    LN885099    ADM32897.1    CUQ99388.1    AB263116    BAG71420.1    KC188669    AGI96751.1    KC538876    AGK43824.1    KT588099    AOE48009.1    KU598894    ANZ03140.1    ODYU01006989    SOQ49331.1    KF768670    AIG51864.1    AB508337    BAI66648.1    SOQ49333.1    KF856285    AHI44516.1    KF768669    AIG51863.1    MF431269    AXJ21642.1    EU979117    ACL81182.1    SOQ49330.1    KX084459    ARO76414.1    KC960468    AGY14579.2    EU818705    ACF32964.1    NWSH01000007    PCG80966.1    GENK01000052    JAV45861.1    AJ748331    CAG38117.1    KC299919    AGH58122.1    PCG80967.1    AJ748330    CAG38116.1    AB508331    BAI66642.1    KY660036    AUY55141.1    KC526973    AGS41449.1    AB508321    BAI66632.1    AJ748329    CAG38115.1    AB263110    BAG71414.1    KC526965    AGS41441.1    KC526970    AGS41446.1    AB597007    BAJ61935.1    AB467323    BAH57978.1    KT588100    AOE48010.1    KM892377    AJF23792.1    KT588098    AOE48008.1    AB508304    BAI66615.1    KF768660    AIG51854.1    KJ542670    AJD81554.1    JX982530    AGK90005.1    GQ165723    ACS45309.1    EU791886    ACJ12927.2    AB508310    BAI66621.1    KJ830840    AIZ94620.1    HQ619210    AET06154.1    KM678293    AJE25866.1    AB467326    BAH57981.1    AB594450    BAJ22890.1    GQ165720    ACS45306.1    PCG80965.1    LC002701    BAR43449.1    KY660033    AUY55138.1    AB467321    BAH57976.1    KM655531    AIT71981.1    JX910532    AGG91649.1    JN169140    AB596042    AFK30401.1    BAJ61929.1    KJ830838    AIZ94618.1    JX173648    AFP54146.1    JN169138    AFK30399.1    AB467325    BAH57980.1    HQ619206    AET06150.1    AB467320    BAH57975.1    KM597195    AIT69872.1    JN169139    AFK30400.1    GQ844880    ADB89182.1    AB263113    BAG71417.1    AB508316    BAI66627.1    AB508325    BAI66636.1    JX910525    AGG91642.1   
Pfam
PF02949   7tm_6
Interpro
IPR004117   7tm6_olfct_rcpt       

Ontologies

Topology

Subcellular location
Cell membrane  
SignalP
Position:   1 - 23,         Likelihood:  0.715081
 
 
Length:
222
Number of predicted TMHs:
4
Exp number of AAs in TMHs:
89.00138
Exp number, first 60 AAs:
23.16925
Total prob of N-in:
0.63848
POSSIBLE N-term signal
sequence
inside
1  -  6
TMhelix
7  -  29
outside
30  -  57
TMhelix
58  -  80
inside
81  -  134
TMhelix
135  -  157
outside
158  -  188
TMhelix
189  -  211
inside
212  -  222
 
 

Population Genetic Test Statistics

Pi
20.549944
Theta
30.122969
Tajima's D
-1.005746
CLR
0.511514
CSRT
0.137943102844858
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
Copyright@ 2018-2023    Any Comments and suggestions mail to:zhuzl@cqu.edu.cn   渝ICP备19006517号

渝公网安备 50010602502065号