Gene

KWMTBOMO16470

Pre Gene Modal

BGIBMGA013885

Annotation

PREDICTED:_beta-1?3-galactosyltransferase_4-like?_partial_[Papilio_machaon]

Location

Bomo_Chr28(+):10555018-10566096      View in EpiBrowser

Full name

Hexosyltransferase      

Location in the cell

Mitochondrial   Reliability : 1.521 PlasmaMembrane   Reliability : 1.533

CDS

ATGGGCGCGCTGCGACGCACGCACGGCGCGGCGCTGCTGGCGGTCGGGGCCCTCCTACTCGTGCTCTTCGCGCACCTCCCGCCCGCGCCGCGCCCTCCCCCCGCGCCACGACCGGCGCCTCTACTAGTGCCACCCTCCACCCCTCCCGCTCCCTCCAACCGCACAGTTTCCACCCGCGCGTCCCAAACTACAGCGCCGCCGCACCCACCCTCGCCGACCCCGCGACCCAAACCCGCGCCCCTTCTCACTAAGGACGTCTACGTGAGTGGACACGAGCGGCCCCACCCTGAACTGTGTCCGGCGCTGGGGGCACACCTCCGTATGTTAGTGCTGATCACGTCTGCGCCCTCGCACGCTGAGGCGCGCGCTGCCATCCGTTTCACCTGGGGTCACTACGCGGCACGCCGGGACCTCACAATCGCCTTCATGCTGGGCACTCCGCCCCCTGACTTGCGCTCCGCCCTGGTCGCCGAGGACGAGCTGTACGGGGACCTAATTGTGGGCCGTTTCCGAGACTCTTACTCGAACCTCACGCTGAAGACGCTCTCGATGCTGGAGTGGGCGGACACGTACTGCCCGCGAGCGCCGCGCCTCCTGAAGACGGACGACGACATGTTCATCAACGTGCCGCGCCTGCTGCAGTTCGCGGCGGCGCCGGCGCGCGCCAACGCGACCCGCACCATCTGGGGGAAGGTCGTGAAGAAGTCGTACCCGAAGCGCACCACCAAGTCCAAGTACTACGTGTCCCCGCTGCAGTTCTCGGGCAAGGTGTTCCCGGATTTCGCGACGGGGCCGGCCTACCTGCTGACGACCGACGTGGTCCGCGAGCTGCTGGCGGCCGCGCCCCGCGAGCCCTACCTGCGGCTCGAGGACGTGTTCGTGACGGGCGTGCTGGCCGCCAAGCTGCACGTGACGCGCCGCCTCGCGCCGGAGTTCTACAACAAGAAGGTGCAGGCGCACCCCTGCACCGTGCAGCGCGGCGTCGCCATACACATGGTGCGCTACCACGAGCAGTTCGACCTCTGGCGGAAGCTGCTCGACGGCAAGACCAAGTGCGCCAGCTAG

Protein

MGALRRTHGAALLAVGALLLVLFAHLPPAPRPPPAPRPAPLLVPPSTPPAPSNRTVSTRASQTTAPPHPPSPTPRPKPAPLLTKDVYVSGHERPHPELCPALGAHLRMLVLITSAPSHAEARAAIRFTWGHYAARRDLTIAFMLGTPPPDLRSALVAEDELYGDLIVGRFRDSYSNLTLKTLSMLEWADTYCPRAPRLLKTDDDMFINVPRLLQFAAAPARANATRTIWGKVVKKSYPKRTTKSKYYVSPLQFSGKVFPDFATGPAYLLTTDVVRELLAAAPREPYLRLEDVFVTGVLAAKLHVTRRLAPEFYNKKVQAHPCTVQRGVAIHMVRYHEQFDLWRKLLDGKTKCAS

Similarity

Belongs to the glycosyltransferase 31 family.

Uniprot

A0A2H1VS19   E2AI40   A0A0J7K7Z0   A0A1B6I9I7   A0A1B6LV84   A0A232EJH4   + More
A0A154PKY5   K7IXW7   A0A195AT65   A0A0L7QLG3   A0A195EL97   E9IGG4   A0A151WJ47   F4W7M5   A0A195ESJ8   V9IGN8   A0A088AUW2   A0A067RKZ6   A0A1W4WZV4   A0A1L8E1E6   A0A1L8E1I3   A0A1L8E1H2   E2C3B0   A0A158NPM8   A0A1B0CM36   A0A151IMP6   A0A0M8ZZJ2   A0A0C9R5P5   A0A2J7RP07   A0A1B0DFY6   A0A026W4H9   D6W731   A0A2R7WUJ0   A0A310SIP0   A0A1S4EJJ1   A0A0A9X6H7   A0A224XSB2   A0A0V0G677   A0A023EY29   A0A2P8ZI62   A0A1J1JB18   A0A1Y1K7E3   A0A1Y1K7D3   A0A0M4EBD2   B4N0Z2   A0A0L0C161   A0A1I8MPA0   T1PD96   A0A1I8NRB9   A0A336M0V7   D6X4Q6   B4LST3   E0VB64   W8AMB2   J3JT67   B4KEC7   A0A1Q3FX53   A0A1Q3FX12   A0A1W4W8D9   A0A0A1XHU6   T1H9L6   B4JC07   B4HYE9   B4H8T3   Q29L44   A0A0K8URA8   A0A182HE01   B4Q6A0   Q9VLS8   A0A3B0K8U2   A0A2M4ALW2   A0A3B0KEM8   A0A1B0AKX6   A0A2M4AL69   B4NWD8   B3N706   A0A034VP52   A0A182J347   A0A1A9W437   A0A023EUN9   B3MMW8   A0A2M3ZKV5   A0A087ZCU3   A0A2M4BNB4   A0A2M4BMR3   A0A2M4BMU1   A0A1A9ZEU0   A0A084VLR0   W5JAY7   A0A182SZY0   A0A1A9XUZ1   A0A182M3N5   A0A1B0FNZ5   A0A1A9UW09   A0A182XBZ9  

EC Number

2.4.1.-

Pubmed

20798317    28648823    20075255    21282665    21719571    24845553    + More
21347285    24508170    30249741    18362917    19820115    25401762    26823975    25474469    29403074    28004739    17994087    26108605    25315136    18057021    20566863    24495485    22516182    23537049    25830018    15632085    26483478    22936249    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    17550304    25348373    24945155    20920257    24438588   

EMBL

ODYU01003804    SOQ43024.1    GL439639    EFN66891.1    LBMM01012025    KMQ86472.1    + More
GECU01024127    JAS83579.1    GEBQ01012403    JAT27574.1    NNAY01003994    OXU18520.1    KQ434954    KZC12529.1    KQ976745    KYM75386.1    KQ414934    KOC59351.1    KQ978730    KYN28993.1    GL763018    EFZ20339.1    KQ983049    KYQ47854.1    GL887844    EGI69898.1    KQ981986    KYN31198.1    JR044048    AEY59837.1    LC017705    BAR92726.1    KK852564    KDR21275.1    GFDF01001536    JAV12548.1    GFDF01001535    JAV12549.1    GFDF01001537    JAV12547.1    GL452318    EFN77556.1    ADTU01022615    AJWK01018112    AJWK01018113    AJWK01018114    AJWK01018115    KQ977026    KYN06216.1    KQ435794    KOX74117.1    GBYB01011623    GBYB01011624    JAG81390.1    JAG81391.1    NEVH01002143    PNF42567.1    AJVK01033528    AJVK01033529    KK107488    QOIP01000012    EZA49949.1    RLU16078.1    KQ971307    EFA11499.2    KK855596    PTY23218.1    KQ759866    OAD62491.1    GBHO01030934    GDHC01014030    JAG12670.1    JAQ04599.1    GFTR01005557    JAW10869.1    GECL01002537    JAP03587.1    GBBI01004714    JAC13998.1    PYGN01000049    PSN56197.1    CVRI01000074    CRL08241.1    GEZM01090310    JAV57294.1    GEZM01090311    JAV57293.1    CP012523    ALC38722.1    CH963920    EDW78154.2    JRES01001042    KNC26025.1    KA646731    AFP61360.1    UFQT01000375    SSX23690.1    KQ971380    EEZ97677.1    CH940649    EDW64844.1    KRF81894.1    KRF81895.1    DS235022    EEB10620.1    GAMC01019468    JAB87087.1    APGK01047210    BT126423    KB741077    KB631792    AEE61387.1    ENN74230.1    ERL86142.1    CH933807    EDW12895.1    KRG03476.1    KRG03477.1    KRG03478.1    GFDL01002888    JAV32157.1    GFDL01002895    JAV32150.1    GBXI01004214    JAD10078.1    ACPB03024970    CH916368    EDW04110.1    CH480818    EDW52079.1    CH479225    EDW35142.1    CH379061    EAL32980.2    GDHF01023434    JAI28880.1    JXUM01130687    KQ567608    KXJ69346.1    CM000361    CM002910    EDX04176.1    KMY88932.1    AE014134    AY058605    AAF52606.2    AAL13834.1    OUUW01000006    SPP82046.1    GGFK01008277    MBW41598.1    SPP82048.1    JXJN01029118    GGFK01008212    MBW41533.1    CM000157    EDW88455.1    CH954177    EDV59302.1    GAKP01014738    JAC44214.1    GAPW01001424    JAC12174.1    CH902620    EDV30993.1    GGFM01008381    MBW29132.1    GGFJ01005361    MBW54502.1    GGFJ01005235    MBW54376.1    GGFJ01005234    MBW54375.1    ATLV01014545    KE524974    KFB38904.1    ADMH02001755    ETN61166.1    AXCM01000631    CCAG010013125   

Proteomes

UP000000311    UP000036403    UP000215335    UP000076502    UP000002358    UP000078540    + More
UP000053825    UP000078492    UP000075809    UP000007755    UP000078541    UP000005203    UP000027135    UP000192223    UP000008237    UP000005205    UP000092461    UP000078542    UP000053105    UP000235965    UP000092462    UP000053097    UP000279307    UP000007266    UP000079169    UP000245037    UP000183832    UP000092553    UP000007798    UP000037069    UP000095301    UP000095300    UP000008792    UP000009046    UP000019118    UP000030742    UP000009192    UP000192221    UP000015103    UP000001070    UP000001292    UP000008744    UP000001819    UP000069940    UP000249989    UP000000304    UP000000803    UP000268350    UP000092460    UP000002282    UP000008711    UP000075880    UP000091820    UP000007801    UP000092445    UP000030765    UP000000673    UP000075901    UP000092443    UP000075883    UP000092444    UP000078200    UP000076407   

PRIDE

Q9VLS8   

Pfam

PF01762   Galactosyl_T        + More
PF00400   WD40

Interpro

IPR002659   Glyco_trans_31        + More
IPR036322   WD40_repeat_dom_sf       
IPR017986   WD40_repeat_dom       
IPR001680   WD40_repeat       
IPR015943   WD40/YVTN_repeat-like_dom_sf       

SUPFAM

SSF50978   SSF50978       

Gene 3D

2.130.10.10    

ProteinModelPortal

A0A2H1VS19   E2AI40   A0A0J7K7Z0   A0A1B6I9I7   A0A1B6LV84   A0A232EJH4   + More
A0A154PKY5   K7IXW7   A0A195AT65   A0A0L7QLG3   A0A195EL97   E9IGG4   A0A151WJ47   F4W7M5   A0A195ESJ8   V9IGN8   A0A088AUW2   A0A067RKZ6   A0A1W4WZV4   A0A1L8E1E6   A0A1L8E1I3   A0A1L8E1H2   E2C3B0   A0A158NPM8   A0A1B0CM36   A0A151IMP6   A0A0M8ZZJ2   A0A0C9R5P5   A0A2J7RP07   A0A1B0DFY6   A0A026W4H9   D6W731   A0A2R7WUJ0   A0A310SIP0   A0A1S4EJJ1   A0A0A9X6H7   A0A224XSB2   A0A0V0G677   A0A023EY29   A0A2P8ZI62   A0A1J1JB18   A0A1Y1K7E3   A0A1Y1K7D3   A0A0M4EBD2   B4N0Z2   A0A0L0C161   A0A1I8MPA0   T1PD96   A0A1I8NRB9   A0A336M0V7   D6X4Q6   B4LST3   E0VB64   W8AMB2   J3JT67   B4KEC7   A0A1Q3FX53   A0A1Q3FX12   A0A1W4W8D9   A0A0A1XHU6   T1H9L6   B4JC07   B4HYE9   B4H8T3   Q29L44   A0A0K8URA8   A0A182HE01   B4Q6A0   Q9VLS8   A0A3B0K8U2   A0A2M4ALW2   A0A3B0KEM8   A0A1B0AKX6   A0A2M4AL69   B4NWD8   B3N706   A0A034VP52   A0A182J347   A0A1A9W437   A0A023EUN9   B3MMW8   A0A2M3ZKV5   A0A087ZCU3   A0A2M4BNB4   A0A2M4BMR3   A0A2M4BMU1   A0A1A9ZEU0   A0A084VLR0   W5JAY7   A0A182SZY0   A0A1A9XUZ1   A0A182M3N5   A0A1B0FNZ5   A0A1A9UW09   A0A182XBZ9  

KEGG

101735995    no KO assigned | (RefSeq) beta-1,3-galactosyltransferase 5-like

GO

GO:0008378   GO:0016021   GO:0000139   GO:0006486   GO:0008499   GO:0005794   GO:0009312   GO:0008376   GO:0005783   GO:0006487   GO:0008039   GO:0016020   GO:0003824   GO:0043565   GO:0005839   GO:0051603   GO:0046835   GO:0006281   GO:0006259  

PANTHER

PTHR11214  

Subcellular location

Golgi apparatus membrane  

SignalP

Position:   1 - 24,         Likelihood:  0.580393

 

 

Length:

354

Number of predicted TMHs:

1

Exp number of AAs in TMHs:

20.4719099999999

Exp number, first 60 AAs:

20.46348

Total prob of N-in:

0.97847

POSSIBLE N-term signal

sequence

inside

1  -  6

TMhelix

7  -  29

outside

30  -  354

 

 

Pi

269.457552

Theta

201.135778

Tajima's D

0.966834

CLR

0.296935

CSRT

0.648167591620419

Interpretation

Uncertain