SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO16460
Pre Gene Modal
BGIBMGA013881
Annotation
hypothetical_protein_RR48_02034_[Papilio_machaon]
Location in the cell
Extracellular   Reliability : 3.174
 

Sequence

CDS
ATGGTCCACTTTATTTTTATAGCATACTTCTGTACGTTGTATCGCGCCATCAACGGCGATAACGAAACTCCCACAGTGGAGAGACGTGAGGATCCGGGAGTACCAGCACAGCATCATCGATATGAGGGTCCGCCCACGCCGTGCCCGGCGCGCGTGGAGTACGCCACTCCAGTGTTCGCGCGGAACTACCAGGGCGTCTGGCGCTACGTCGTGCAGATACCCTACGAGGGGTACTTCACGCAGACCGTCGAGCTCACCAGGTGCATGCAGTCCCGTTGTCATTATTTAGAAGGTGGATGTCTGAGCTCCCCTCGCTGGGTCTCCCTGCTCGTCGCTGAGTTACACTATCCCACAGAGCTTCAGACTCCTCAGCCGGAGTACTCGCAGTACGCGGCCGAGCCCAGCACCGAGAAGCCACCGCACTGCGACGGACACGACGACATGGGCTGCTTCCAGGTGAGGCTCTACTACGACTGGTTCCTGGTTCCCGGCTCCTGCAAGTGTTGGAGGCCCGACTATTTCGCGAGGTATGTCCGGCGCCGTCAGAACAACGAGTTGTAA
Protein
MVHFIFIAYFCTLYRAINGDNETPTVERREDPGVPAQHHRYEGPPTPCPARVEYATPVFARNYQGVWRYVVQIPYEGYFTQTVELTRCMQSRCHYLEGGCLSSPRWVSLLVAELHYPTELQTPQPEYSQYAAEPSTEKPPHCDGHDDMGCFQVRLYYDWFLVPGSCKCWRPDYFARYVRRRQNNEL

Summary

EMBL
BABH01029399    ODYU01002465    SOQ39990.1    NWSH01000325    PCG77445.1    KZ150111    + More
PZC73349.1    KQ459670    KPJ20498.1    KQ459054    KPJ03885.1    AE013599    BT001656    AAF47261.1    AAN71411.1    CM000362    CM002911    EDX08607.1    KMY96419.1    CH480838    EDW49249.1    CH902619    EDV37671.2    AY190942    AAO01029.1    CH963849    EDW73925.1    CM000071    EAL25803.2    CH479183    EDW36268.1    JRES01000655    KNC29554.1    GBXI01016754    JAC97537.1    AY190953    AAO01073.1    CH940648    EDW60050.1    CH916367    EDW01625.1    CH954179    EDV57061.1    CM000158    EDW92594.1    CCAG010018996    JXJN01021585    CP012524    ALC40892.1    GDHF01028064    GDHF01023553    JAI24250.1    JAI28761.1    CH933808    EDW08541.1    GAKP01016979    JAC41973.1    KQ971354    EFA07582.2    GAMC01002738    JAC03818.1    LJIG01009930    KRT82096.1    AY122219    AAM52731.1    OUUW01000001    SPP74526.1    GL449633    EFN82404.1    KQ981954    KYN32235.1    GL435158    EFN73936.1    APGK01052264    KB741211    KB632263    ENN72813.1    ERL90947.1    GL888565    EGI59479.1    KQ414735    KOC62190.1    KQ980612    KYN15129.1    GL762758    EFZ20847.1    KU668685    APA05230.1    KQ435127    KZC14821.1    QOIP01000010    RLU17352.1    GEZM01058096    JAV71910.1    KK107077    EZA60533.1    KQ982519    KYQ55549.1    KQ977642    KYN01101.1    KQ976413    KYM90396.1    ADTU01010340    CVRI01000057    CRL02300.1    UFQT01001137    SSX29096.1    NEVH01020943    PNF20448.1    GBYB01012644    JAG82411.1    JXUM01012815    KQ560362    KXJ82824.1    KK852607    KDR20342.1    DS231842    EDS35282.1    JXUM01046774    KQ561490    KXJ78403.1    CH477847    EAT35683.1    AXCM01000364    ADMH02002078    ETN59468.1    GGMR01012598    MBY25217.1    ABLF02019761    GGMS01004418    MBY73621.1    ATLV01021828    KE525324    KFB46894.1    GBHO01023237    GDHC01007946    JAG20367.1    JAQ10683.1    AAAB01008900    EDO64088.1    APCN01002922    DS235161    EEB12714.1    GDKW01002477    JAI54118.1    GBGD01002028    JAC86861.1    GBBI01003563    JAC15149.1    AJVK01017314    EAA09424.3    HACA01002982    CDW20343.1    KQ435776    KOX74900.1    KZ288215    PBC32670.1   
Pfam
PF16077   Spaetzle
Interpro
IPR029034   Cystine-knot_cytokine        + More
IPR032104   Spaetzle       
SUPFAM
SSF57501   SSF57501       
Gene 3D

Ontologies

Topology

SignalP
Position:   1 - 19,         Likelihood:  0.864017
 
 
Length:
186
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.02998
Exp number, first 60 AAs:
0.02655
Total prob of N-in:
0.03154
outside
1  -  186
 
 

Population Genetic Test Statistics

Pi
256.854788
Theta
189.807427
Tajima's D
1.110182
CLR
0
CSRT
0.692215389230538
Interpretation
Uncertain
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