SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO16458  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA013811
Annotation
PREDICTED:_nicotinamide_riboside_kinase_1_[Papilio_xuthus]
Location in the cell
Cytoplasmic   Reliability : 2.286
 

Sequence

CDS
ATGCCTGGCAAAGATTGGATCATAATCGGCATTTCCGGGGTCACTTGTGGCGGAAAAACGACCCTTGCCAATAAGTTAAAGAATGCCCTAACACCAGTCTACGTGTTTCATCAAGACAAATATTTTTATCCTGACGACAGTCCGAAACACATTAAGTGCGAAGGGTTAGACCACAACGACTACGATGTGCTGTCGTCGCTGGACATGGAGACCATGTACGATGACATCACGAAGACCTTGAGCGGCGAGGACAGGTCGCATGCCAACCGTTTGGAGGGAACATCCACCGTAGCCGGTACAAAGTTCTTGGTGATTGAAGGTTTCACGGTGTTAAATTATAAACCTATTATGGAGATCTGTGATTTGAGATACTACTTCATCCTAGAGTACGGGGAGTGCGTGTCCCGCCGCGTGCTGCGACTGTACGACCCGCCAGACGTCGCCGGGTACTTCGACACGTGCGTGTGGCCGCGGCACTTGTACTACAGGGCGCAGATAGAGAAGGACCGGCGCGTGAAGTTGCTGGACGCGACGCAGCAGGACTCGTTCGAGGTCGTCATGGCGGACATCGACGCCCTCACGCGGTGA
Protein
MPGKDWIIIGISGVTCGGKTTLANKLKNALTPVYVFHQDKYFYPDDSPKHIKCEGLDHNDYDVLSSLDMETMYDDITKTLSGEDRSHANRLEGTSTVAGTKFLVIEGFTVLNYKPIMEICDLRYYFILEYGECVSRRVLRLYDPPDVAGYFDTCVWPRHLYYRAQIEKDRRVKLLDATQQDSFEVVMADIDALTR

Summary

EMBL
BABH01029399    RSAL01000351    RVE42266.1    KQ459054    KPJ03888.1    NWSH01000325    + More
PCG77442.1    GAIX01009158    JAA83402.1    KZ150111    PZC73346.1    AGBW02013941    OWR42543.1    JTDY01001131    KOB74786.1    KQ459670    KPJ20500.1    ODYU01002465    SOQ39991.1    GEZM01010891    GEZM01010890    GEZM01010889    GEZM01010888    JAV93750.1    APGK01043981    KB741019    KB631645    ENN75159.1    ERL84976.1    KK107077    QOIP01000010    EZA60537.1    RLU17353.1    KQ435007    KZC13480.1    LBMM01002414    KMQ94855.1    GL438187    EFN69431.1    KQ435796    KOX73552.1    GL768105    EFZ12287.1    KQ971319    EFA11386.1    JH431114    KQ981954    KYN32231.1    KQ414860    KOC60063.1    ADTU01010339    KQ770827    OAD52586.1    GDRN01063000    GDRN01062998    JAI65020.1    NNAY01002246    OXU21734.1    KQ982519    KYQ55547.1    KZ288193    PBC34018.1    JR040909    AEY59325.1    KQ976413    KYM90400.1    GL888565    EGI59476.1    KQ977642    KYN01097.1    KQ980612    KYN15127.1    GL449633    EFN82408.1    KK852999    KDR12668.1    AJWK01015919    GEBQ01027910    GEBQ01012281    GEBQ01011741    JAT12067.1    JAT27696.1    JAT28236.1    GFDF01002815    JAV11269.1    GFDF01002814    JAV11270.1    GDKW01003656    JAI52939.1    ACPB03012091    BDGG01000001    GAU89930.1    GEDC01021044    GEDC01014446    GEDC01004822    JAS16254.1    JAS22852.1    JAS32476.1    GDAI01002075    JAI15528.1    GEFH01004760    JAP63821.1    AJVK01011741    GEDV01007466    JAP81091.1    MUZQ01000457    OWK51243.1    AAPE02013649    KE162617    EPQ09044.1    GACK01007799    JAA57235.1    AEYP01078457    AEYP01078458    KL217955    KFP00665.1    AK417463    BAN20678.1    IAAA01034006    LAA09059.1    IAAA01034007    LAA09061.1    KK854065    PTY10585.1    KK719539    KFO63892.1    IAAA01034008    LAA09064.1    AADN05000490    JARO02008598    KPP62518.1    ABQF01033114    MUZQ01000038    OWK61618.1    AKHW03001665    KYO41177.1    AANG04003917    KB030265    ELK19391.1    AGTO01011791    GEDC01006438    JAS30860.1    AEFK01076915    AEFK01076916    AEFK01076917    AEFK01076918    ACTA01172923    AJFE02076926    LMAW01001703    KQK82790.1    AACZ04029827    GABC01007372    GABF01010600    GABD01010586    GABE01003445    NBAG03000246    JAA03966.1    JAA11545.1    JAA22514.1    JAA41294.1    PNI62093.1    GBYX01205874    GBYX01205862    JAO77998.1    KK718913    KFO59823.1   
Pfam
PF00485   PRK
Interpro
IPR027417   P-loop_NTPase        + More
IPR006083   PRK/URK       
IPR026681   NRK       
SUPFAM
SSF52540   SSF52540       
PDB
2QT1     E-value=4.40087e-26,     Score=289

Ontologies

Topology

Length:
195
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.13193
Exp number, first 60 AAs:
0.11152
Total prob of N-in:
0.05167
outside
1  -  195
 
 

Population Genetic Test Statistics

Pi
234.288455
Theta
194.766666
Tajima's D
0.601297
CLR
0.187276
CSRT
0.544772761361932
Interpretation
Uncertain
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