Silkworm Genome Informatics Database

Gene

KWMTBOMO16455 Validated by peptides from experiments

Pre Gene Modal

BGIBMGA013813

Annotation

PREDICTED:_uncharacterized_protein_LOC106140905_isoform_X2_[Amyelois_transitella]

Location

Bomo_Chr28(-):10394011-10398797 View in EpiBrowser

Location in the cell

Cytoplasmic Reliability : 1.157 Extracellular Reliability : 1.172 Nuclear Reliability : 1.518

CDS

ATGGGAGTGTCATGCCCTGAGCGTCAAGGTTGCTCGGCGGAGCGTATCTGGTACGCGGCATGTACCACACTTGGAATACCTGAAGCGGACGACCCATGGAAGAAAATCGTAGAAGCTTCACCACCGGATTCCATATGGCATTCCCTAAGAAACTGCGTTGCCTATCAGGCGGGGGTCTGGCAGAACTTGATCACAAAGGGCATCGATGACGTCATGCAGCCGGCCGCCTTCAAACTGGCAATCGTACTGCGACACACACCCACCGAAGACTGCGCTAAATTAATGTCCGAGCTCCTGAAAACGCATCCGGTATCTGTGCAAGAAGAGCTGACATCGTACTGCGTGTCGCTGCTGACGGACGACGAGGCGCGGCGCTGCGCCTGCTGGCAAAGCGGCCCGTCCGGCCCCCCCGCCCCCCTGCGTGACCTGCTGCTCTACGGGGACCTGGAGCTGGCGATTTTGGCCGCTTCTCGCGAAGAATACGATGCTCATGCGAAGCTAGTGCGGGCGGAGTACTCGAAGCTCACCCAGGACAACTACGTCGAACTACGAATTAAGGTGCTGAACCAGTTCTCTCAGATCCCGAAGCTGTTCCACTCGCCCGAGTTCGCGTGCTTCGAGCCGGCCGCGCGCGAGAACATCGAGCGCGAAATCTGTACTCTCAGAGAACACCTGCTCACGGGCAGAAAAGATTAA

Protein

MGVSCPERQGCSAERIWYAACTTLGIPEADDPWKKIVEASPPDSIWHSLRNCVAYQAGVWQNLITKGIDDVMQPAAFKLAIVLRHTPTEDCAKLMSELLKTHPVSVQEELTSYCVSLLTDDEARRCACWQSGPSGPPAPLRDLLLYGDLELAILAASREEYDAHAKLVRAEYSKLTQDNYVELRIKVLNQFSQIPKLFHSPEFACFEPAARENIEREICTLREHLLTGRKD

Similarity

Belongs to the type-B carboxylesterase/lipase family.

Uniprot

H9JW99 S4PH15 A0A212EM58 A0A194QEI5 A0A0L7L147 A0A3S2P546 + More
A0A0N0PET7 A0A0N4ZCT1 A0A0K0EGV2 A6DKG7 A0A0N5B271 A0A0K0EXH6

Pubmed

19121390 23622113 22118469 26354079 26227816 20363947 + More

EMBL

BABH01029395 GAIX01000624 JAA91936.1 AGBW02013941 OWR42541.1 KQ459054 + More
KPJ03892.1 JTDY01003664 KOB69192.1 RSAL01000382 RVE42047.1 KQ459670 KPJ20504.1 ABCK01000007 EDM27865.1

Proteomes

UP000005204 UP000007151 UP000053268 UP000037510 UP000283053 UP000053240 + More
UP000038045 UP000035681 UP000004947 UP000046392 UP000035680

PRIDE

H9JW99

Pfam

PF00135   COesterase        + More
PF01585   G-patch
PF17780   OCRE

Interpro

IPR009218   HD_phosphohydro        + More
IPR029058   AB_hydrolase
IPR002018   CarbesteraseB
IPR019826   Carboxylesterase_B_AS
IPR012677   Nucleotide-bd_a/b_plait_sf
IPR036443   Znf_RanBP2_sf
IPR041591   OCRE
IPR000467   G_patch_dom

SUPFAM

SSF53474 SSF53474 + More
SSF90209 SSF90209

Gene 3D

3.40.50.1820 3.30.70.330

ProteinModelPortal

H9JW99 S4PH15 A0A212EM58 A0A194QEI5 A0A0L7L147 A0A3S2P546 + More
A0A0N0PET7 A0A0N4ZCT1 A0A0K0EGV2 A6DKG7 A0A0N5B271 A0A0K0EXH6

KEGG

101743533 no KO assigned | (RefSeq) uncharacterized LOC101743533

GO

GO:0016787 GO:0003676

PANTHER

PTHR21174

Length:

231

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00032

Exp number, first 60 AAs:

0.00028

Total prob of N-in:

0.05350

outside

1 - 231

Pi

167.067828

Theta

194.340061

Tajima's D

-0.72839

CLR

375.056464

CSRT

0.192690365481726

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics