Silkworm Genome Informatics Database

Gene

KWMTBOMO16452

Pre Gene Modal

BGIBMGA013815

Annotation

PREDICTED:_doublesex-_and_mab-3-related_transcription_factor_A2_[Bombyx_mori]

Location

Bomo_Chr28(-):10354674-10360967 View in EpiBrowser

Transcription factor

DM

Location in the cell

Extracellular Reliability : 2.185 Nuclear Reliability : 1.662

CDS

ATGGAAATGTCACTTCCGAACGGTGTAGACGTGTCTCAGTTGGTGCAGCATCCCGTGCTCGCCGCCCTGCCGCCCTTCTTCCTGAGAGCGTCCGAAAGATATCAGCGGACCCCGAAGTGCGCTCGGTGCCGGAACCACGGCGTGGTCTCTGCACTGAAGGGGCACAAGCGGTACTGCCGGTGGCGCGACTGCGTGTGCGCCAAGTGCACACTTATAGCCGAGCGACAGCGCGTCATGGCCGCACAGGTTGCTCTGCGTCGCCAGCAAGCCCAAGAGGAGAACGAAGCCCGGGAGTTGAACCTACTATACGCGGGGCAGCCGTCCAGCGCGCCGCACCACTACGCCGATATGCCCGACGGATCACCAGGAACAACTGGTCCGATTTGA

Protein

MEMSLPNGVDVSQLVQHPVLAALPPFFLRASERYQRTPKCARCRNHGVVSALKGHKRYCRWRDCVCAKCTLIAERQRVMAAQVALRRQQAQEENEARELNLLYAGQPSSAPHHYADMPDGSPGTTGPI

Uniprot

A0A2A4K116 A0A2W1BDP7 A0A194QEA6 A0A212EM32 A0A0L7KU07

Pubmed

28756777 26354079 22118469 26227816

EMBL

NWSH01000325 PCG77453.1 KZ150111 PZC73339.1 KQ459054 KPJ03873.1 + More
AGBW02013941 OWR42536.1 JTDY01005808 KOB66600.1

Proteomes

UP000218220 UP000053268 UP000007151 UP000037510

Pfam

PF03474 DMA + More
PF00751 DM

Interpro

IPR009060   UBA-like_sf        + More
IPR036407   DM_DNA-bd_sf
IPR001275   DM_DNA-bd
IPR026607   DMRT/dsx/mab-3
IPR005173   DMA

SUPFAM

SSF82927 SSF82927 + More
SSF46934 SSF46934

Gene 3D

4.10.1040.10

ProteinModelPortal

A0A2A4K116 A0A2W1BDP7 A0A194QEA6 A0A212EM32 A0A0L7KU07

PDB

4YJ0 E-value=7.34847e-12, Score=163

KEGG

101735734 K19491 doublesex- and mab-3-related transcription factor 4/5 | (RefSeq) doublesex- and mab-3-related

GO

GO:0003700 GO:0043565 GO:0046872 GO:0005634 GO:0006355 GO:0016021 GO:0003824 GO:0005839 GO:0051603 GO:0046835 GO:0006281 GO:0006259

PANTHER

PTHR12322

Subcellular location

Nucleus

Length:

128

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.22349

Exp number, first 60 AAs:

0.22349

Total prob of N-in:

0.06192

outside

1 - 128

Pi

277.426407

Theta

157.756497

Tajima's D

1.45465

CLR

0

CSRT

0.776411179441028

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics