Silkworm Genome Informatics Database

Gene

KWMTBOMO16450

Annotation

PREDICTED:_doublesex-_and_mab-3-related_transcription_factor_A2_[Bombyx_mori]

Location

Bomo_Chr28(-):10329613-10330747 View in EpiBrowser

Location in the cell

Nuclear Reliability : 3.625

CDS

ATGTACGTTCAGAAGCGCGCTCGCATCACCGAGGTTTGTTCCACCAGTCCATCTCCTATCAACGAACAACCCAGGGATCCGAAGACTCCAGCGCCGACGCCGCCGCTAGCCACACCCCCGCCCCGCTCTCCTTCTGACCACGAACTAAACGTGGAGGAGGAGCTAGAAGAATCAGAACCATCTCTCACTCCCGAAAACCTGTCCATGAAGGAGTCTCGCGAAGAGATGCCTGTCAAAAAAGAAGAAGAAAAATGGGAGAATAACGAGTTTAAATACAAAATGTTTAGACGTAAAGATCTCCCCGAGCCCGCCCACGAGGAGAGTCAGTATCAGAAATCTCCAGTGGACGTGCTATTGAAAGTGTTCCCGCGACGCAGCCGGCAAGAGATCGAGGCTATCCTGGCGCGGTGCAAGGGAGACGTCGTAGCGGCCATGGACTCCATGGTGAACGGGCCGGAACCCAATCCTTACCACGTGACGCAGGAATCTCCACCTTACCTCCAAAATTACCAGTCGAAATCAGCGTTTTCTCCTCTATCGAACCAGAGTTTCAAGTTCTCCCCGTCACGGCGGTTTCTGACTCCACCTTACAGCGGGACGGGGTATTTGCCCACTGTAATCCGGCCGCCACCGGAGTACCTTTCATCATTTATGCCACCTTCAGAGCTGATGTACGGGAGGCAGCTTCAGGTACCATCGCCGGGAACCTCTCCCACTTCTGATAACACGAACAACGATGGCTTTTCTGATTAA

Protein

MYVQKRARITEVCSTSPSPINEQPRDPKTPAPTPPLATPPPRSPSDHELNVEEELEESEPSLTPENLSMKESREEMPVKKEEEKWENNEFKYKMFRRKDLPEPAHEESQYQKSPVDVLLKVFPRRSRQEIEAILARCKGDVVAAMDSMVNGPEPNPYHVTQESPPYLQNYQSKSAFSPLSNQSFKFSPSRRFLTPPYSGTGYLPTVIRPPPEYLSSFMPPSELMYGRQLQVPSPGTSPTSDNTNNDGFSD

Uniprot

A0A2A4K1D7 A0A2A4JZL0 A0A2H1VTM5 A0A2A4K116 A0A2W1BDP7 A0A0L7LT03 + More

Pubmed

28756777 26227816

EMBL

NWSH01000325 PCG77452.1 PCG77451.1 ODYU01004376 SOQ44191.1 PCG77453.1 + More
KZ150111 PZC73339.1 JTDY01000148 KOB78593.1

Proteomes

UP000218220 UP000037510

Pfam

PF03474 DMA + More
PF00751 DM

Interpro

IPR009060   UBA-like_sf        + More
IPR026607   DMRT/dsx/mab-3
IPR005173   DMA
IPR036407   DM_DNA-bd_sf
IPR001275   DM_DNA-bd

SUPFAM

SSF46934 SSF46934 + More
SSF82927 SSF82927

Gene 3D

4.10.1040.10

ProteinModelPortal

A0A2A4K1D7 A0A2A4JZL0 A0A2H1VTM5 A0A2A4K116 A0A2W1BDP7 A0A0L7LT03 + More

KEGG

101735734 K19491 doublesex- and mab-3-related transcription factor 4/5 | (RefSeq) doublesex- and mab-3-related

GO

GO:0003700 GO:0005634 GO:0043565 GO:0046872 GO:0005515 GO:0008270 GO:0016021 GO:0003824 GO:0005839 GO:0051603 GO:0046835 GO:0006281 GO:0006259

PANTHER

PTHR12322

Subcellular location

Nucleus

Length:

250

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00517

Exp number, first 60 AAs:

0

Total prob of N-in:

0.32675

outside

1 - 250

Pi

132.240343

Theta

97.084879

Tajima's D

0.828546

CLR

18.833459

CSRT

0.616469176541173

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics