SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO16446
Pre Gene Modal
BGIBMGA013817
Annotation
PREDICTED:_NADPH_oxidase_5_[Bombyx_mori]
Location in the cell
PlasmaMembrane   Reliability : 3.418
 

Sequence

CDS
ATGTCGCTAGTTTCCACACAGAAAAAGATTTGTCGTAACCATCGCAGTTTCAGGACCCTATTGTTGTGTCACAGAGTGGATCTGCTCGAGAGGATATTCCGTTTGTTTGACGTCAAGAAATTAGACCATTTAGTGCAAGATGACTGGATCGAGTACCTCAAAGAACGGCTACCGGAAGAGAGGCAGCTGGACCTGGTGGAACAAATCGAAAGCGTCGCGTACGTTTTGTGCGGCGATGGTGTTATCAGCCTCGATACATTTCAACACATCATGCAGAACAAAGTTGTGACGAAGAAACTCTTTAGGGTATTGGACGTTGACGGTGACGGTTATGTTACAGCTGATAAAGTTATGGAATTCCTCTCAACGGTCAGCAGTAGCAGACCACGCGTGGGCTTTGATAAGCACAGCGTTGACCGACTGGAGCAACTCTTCAAGGAGACGGTGGGAGATCAGAAGGAGATAACAAGAGAACAATTTCAGAAGATTGTCGTCTCCAAAAATCCATTCTTCACAGAGCGGGTTTTCCAGATATTCGATGAAGACGATTCCGGGTCCATCTCTCTCCAGGAGTTCATCGCTGCCGTGCACAGGTTCGCGGGCCAGAGTCCTGACGACAAGATCCGGTTCTTGTTTAAGGTTTATGACTTGGATGGCGACGGCCTAATCCAACACAGGGAGCTGCAGCATGTGATGAGGGCGTGCATGGAGGAAAACGGTATGCAGTTCAGCGATGAGCAACTCTTAGACCTGACCACTGCGATGTTCGAGGACGCTGACGTGGAAGAACGCGGGGCCATCACGTACGAGGCCTTGAAGAATCAGTTGAACAACCATGGGGGGCTGCTGGAGAATCTGTCGATTAGCATAGACCGCTGGCTGGTCCCCCCCAAACCAGACCCCAAGCCGAAGAACCTGCGCCATAAGCTAGCCAAATTAAAACCTTACCAGTTCTCTTTACCTTACTTCAAAAACAACTATGTTTATGTGATATACCTGGTTCTCTTCTACTTGGTGAATTTTGGATTGTTCGTGGCGAGATGCATTGAGTACAGACAGTCTAACGGCTTCGTCATCGTGGCCAGAGCTTGTGGTCAATGCTTGAATTTCAACTGCGCCTGGGTTCTTGTCCTCATGCTGAGGCACAGTATCACAGCGCTGCGAGTCCGGGGCTTCGGTTCAGTCCTGCCTTTGGACCACCACATATATCTGCACAAGCTGACGGGGACACTCATATTTGGATATAGTCTCCTGCATACGCTGATGCATCTTTGTAATTTTAGTCTCGTTGTAATCAACGATCCAGTGATAAACAAGTCAAATTACACTCTGACTGAATGGCTATTGACGGAGCGCCCAGGGTTATTTGGACTGGTGGGAGGCTGTGCTAATGCTACAGGAATAGCTTTGGTCGTAATTCTTGCTGTGATGTTCGTTTGCAGCCAGCCCTTCATACGGAGGGGAGGAAGCTTTGAGGTATTTTACTGGACTCATCTGCTGTACGTGCCTTTCTGGTTACTACTGATCTTCCACGGACCCAACTTTTGGAAATGGTTCATTCTACCGGGAACTATTTATATCACCGAGAGGATCTTGAGATTGGCTTGGATGAGGTCAGAGCGCGGCAAAACGTACATCTCCTCGGGGATACTCCTGCCATCCCGGGTGACGCATCTCGTCATCAAGAGACCGCCGGCCTTCGACTATCACGCCGGCGACTACGTCTTCGTCAACATTCCAGCCATCGCCAGCTACGAGTGGCATCCTTTCACGATCAGCAGTGCGCCTTCTCAACATGATTACATCTGGCTCCACGTACGAGGAGTAGGGGAGTGGACGAACAGATTGTATTCGTATTTTGAGGAGCAGGCCAGGATACATGCTGCTGATGCGAACTCCAGGCTCGGGGAACACCAACAAGTAGCCCGCACCACATCGATCCTGAGCAAACGGAAGAGTTCCGGTGGGAGTGCCAAGAAGAGATCGGTGGACTTCTCTCGTTCCTGTTACACCAGCGAAGCTTTCACTCTTGACGAGGAGGAGAACAATGCGGAATATAAGAAGGAATTCGAAGCATTTTCGCCTTCTTCGATAACGCACAGCACATTGTTAGCGCCAAAGCACTTAGAAAAGTCTGCTTCCATGCCTGACGTGCAGAAGAACATCAAAAAGCGACAGAGAATATTAGCGATGCGAGAATTCATGCGCTCAGAATCCGAGAGAAGCTTCGATTTGGTCAGTGTGAAGGCACAAAAAAAGATAACGAGCGCTTACAAAAGCCCCCAACACAGAGTGCTGGCTCAAAGCTTTCGGTATATGAGAAATAAGCCCGTTATTATAGCTTTTAAGACTCCAAGCCTTGAGAGCTGTGAGAGAAGGCAGTCTAATGATAGCATTTTGACCATAGCAAGACGCAGATTGTCGAAGAGTCTATCACCAGATCGAGATCCAGAGAGTTTCGACAAGCCTGACATCAACATCATTAGTCCTTCGGAGTCCACGGCTGACGACCACTCCTTCTCCAGCTATGCATTTGGAAAACCGCTCGAAATCTACCTGGACGGGCCGTATGGTGCGGCGTCGTCCCACATCCTGCGCGTGGAGCACGCCGTGCTGGTGGCGGCCGGCATCGGCGTCACGCCCTTCGCGGCGCTGCTGCAGGAGCTGGCCCACAGACACCAGGCCGCGAGGAACACCTGCCCACGCTGCTCCCACACTTGGGCCGTTCAACCAGTCGGGACAACGCTTAAAAAGGTGGATTTCTTCTGGATAAACCGTGAGCAGCGCTCGTTCGAGTGGTTCGTCTCCCTCCTCTCCCAGCTGGAGATGTCGCAGGCTGAGCTCTGCGGAGACGAGGGCAGGTTCCTCGACATGCACATGTACATCACCAGCGCCCTACAGAGACACGACATGAAGGCGGTCGGACTGCAGCTGGCTTTGGATTTGTTGCACGAAAAGGGAAAACGCGACCTCATAACGGGCTTGAAGACCCGCACGAACGCCGGAAGACCGAACTGGGATAAGGTCTTCCAACAGCTGCAGCAGCAGAATAAAGGAAAGGTCACGTTGTTCTACTGCGGACCTCCGCAGCTGGCCAGGATACTCAGAGTCAAATGTGACCAATTCGGCTTTGATTTCAGGAAGGAAGTCTTCTAA
Protein
MSLVSTQKKICRNHRSFRTLLLCHRVDLLERIFRLFDVKKLDHLVQDDWIEYLKERLPEERQLDLVEQIESVAYVLCGDGVISLDTFQHIMQNKVVTKKLFRVLDVDGDGYVTADKVMEFLSTVSSSRPRVGFDKHSVDRLEQLFKETVGDQKEITREQFQKIVVSKNPFFTERVFQIFDEDDSGSISLQEFIAAVHRFAGQSPDDKIRFLFKVYDLDGDGLIQHRELQHVMRACMEENGMQFSDEQLLDLTTAMFEDADVEERGAITYEALKNQLNNHGGLLENLSISIDRWLVPPKPDPKPKNLRHKLAKLKPYQFSLPYFKNNYVYVIYLVLFYLVNFGLFVARCIEYRQSNGFVIVARACGQCLNFNCAWVLVLMLRHSITALRVRGFGSVLPLDHHIYLHKLTGTLIFGYSLLHTLMHLCNFSLVVINDPVINKSNYTLTEWLLTERPGLFGLVGGCANATGIALVVILAVMFVCSQPFIRRGGSFEVFYWTHLLYVPFWLLLIFHGPNFWKWFILPGTIYITERILRLAWMRSERGKTYISSGILLPSRVTHLVIKRPPAFDYHAGDYVFVNIPAIASYEWHPFTISSAPSQHDYIWLHVRGVGEWTNRLYSYFEEQARIHAADANSRLGEHQQVARTTSILSKRKSSGGSAKKRSVDFSRSCYTSEAFTLDEEENNAEYKKEFEAFSPSSITHSTLLAPKHLEKSASMPDVQKNIKKRQRILAMREFMRSESERSFDLVSVKAQKKITSAYKSPQHRVLAQSFRYMRNKPVIIAFKTPSLESCERRQSNDSILTIARRRLSKSLSPDRDPESFDKPDINIISPSESTADDHSFSSYAFGKPLEIYLDGPYGAASSHILRVEHAVLVAAGIGVTPFAALLQELAHRHQAARNTCPRCSHTWAVQPVGTTLKKVDFFWINREQRSFEWFVSLLSQLEMSQAELCGDEGRFLDMHMYITSALQRHDMKAVGLQLALDLLHEKGKRDLITGLKTRTNAGRPNWDKVFQQLQQQNKGKVTLFYCGPPQLARILRVKCDQFGFDFRKEVF

Summary

EMBL
BABH01029373    BABH01029374    BABH01029375    BABH01029376    KZ150111    PZC73337.1    + More
KQ459670    KPJ20488.1    KQ459054    KPJ03893.1    KQ971352    KYB26760.1    ACPB03006443    GEDC01000441    JAS36857.1    ABLF02039701    ABLF02039703    ABLF02039704    ODYU01005551    SOQ46505.1    APGK01057813    APGK01057814    KB741282    ENN70809.1    GGMS01013402    MBY82605.1    BR000280    FAA00347.1    GEZM01095949    GEZM01095948    JAV55240.1    NNAY01000895    OXU26034.1    GL445407    EFN89636.1    KK107218    EZA55163.1    GBYB01010833    JAG80600.1    QOIP01000001    RLU27034.1    GBHO01017887    JAG25717.1    KQ981805    KYN35629.1    ADTU01002188    KQ981042    KYN10102.1    KQ434850    KZC08571.1    KQ414780    KOC61199.1    CH902619    KPU76998.1    GL888424    EGI61142.1    DS235442    EEB15790.1    KQ976716    KYM76841.1    KQ978344    KYM94856.1    KQ435711    KOX79420.1    KQ982431    KYQ56501.1    KK852981    KDR12936.1    CVRI01000042    CRK95533.1    CH954179    KQS62459.1    GAMC01016402    JAB90153.1    KZ288294    PBC28986.1    AGBW02010886    OWR47576.1    AB594770    BAL49600.1    GECZ01011811    JAS57958.1    LNIX01000033    OXA40541.1    GBXI01009033    JAD05259.1    GEDC01010812    JAS26486.1    RSAL01001451    RVE40785.1    KK855302    PTY21898.1    QCYY01000874    ROT82160.1    CH933808    EDW08247.2    LJIJ01000943    ODM93630.1    NWSH01003480    PCG66211.1    EDV37719.2    KPU76999.1    LJIJ01001098    ODM93014.1    HACA01003232    CDW20593.1    PYGN01000395    PSN47090.1    GDIQ01007074    JAN87663.1    GEDC01001966    JAS35332.1    NEVH01020333    PNF21809.1   
Pfam
PF13833   EF-hand_8        + More
PF01794   Ferric_reduct
PF08030   NAD_binding_6
PF08022   FAD_binding_8
PF13202   EF-hand_5
PF13499   EF-hand_7
PF00036   EF-hand_1
PF13405   EF-hand_6
Interpro
IPR013130   Fe3_Rdtase_TM_dom        + More
IPR018247   EF_Hand_1_Ca_BS       
IPR013121   Fe_red_NAD-bd_6       
IPR039261   FNR_nucleotide-bd       
IPR029648   NOX5       
IPR017938   Riboflavin_synthase-like_b-brl       
IPR002048   EF_hand_dom       
IPR011992   EF-hand-dom_pair       
IPR017927   FAD-bd_FR_type       
IPR013112   FAD-bd_8       
SUPFAM
SSF52343   SSF52343        + More
SSF63380   SSF63380       
SSF47473   SSF47473       
Gene 3D
PDB
5O0X     E-value=4.05174e-48,     Score=487

Ontologies

Topology

Length:
1051
Number of predicted TMHs:
4
Exp number of AAs in TMHs:
105.25523
Exp number, first 60 AAs:
0.00038
Total prob of N-in:
0.30226
outside
1  -  326
TMhelix
327  -  349
inside
350  -  410
TMhelix
411  -  433
outside
434  -  452
TMhelix
453  -  475
inside
476  -  487
TMhelix
488  -  510
outside
511  -  1051
 
 

Population Genetic Test Statistics

Pi
315.544245
Theta
174.41232
Tajima's D
3.300372
CLR
0.207814
CSRT
0.990650467476626
Interpretation
Uncertain
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