SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO16443
Pre Gene Modal
BGIBMGA013821
Annotation
PREDICTED:_ATP-sensitive_inward_rectifier_potassium_channel_1-like_[Papilio_machaon]
Location in the cell
PlasmaMembrane   Reliability : 3.076
 

Sequence

CDS
ATGAACATTGAGCCCGAACGCAGAGGCAGCAGGAGCCGAGCTTTGGAAAGGTCCTTGAGCTACTCAGAGGCTATCCGAGGAGGATCGGGAAGATCATCAATAGAGATCCCAAATATAGTCGACACGGATGTTTACAGCAACGAAGAATTAAAGAAGCATTACCGAATATCCCAGACCTATGTCGAAGGTAGAGAAATCACATTTCCCTCCACCATCACCAATGTTGACACATCTCCACAGGTCAACGTAAATGCTATCGCATCATCGCAGTATTCCAGTGAAGATGAGACTACGGATTCTGGTCTAGTAATGACAATAGATGTTGAAGATACTACTAAGACATCGGAAGTAACTAAGCCTTTGTCGGATGTAACTCATACTGTTGTGAGTTCGATCCCTATTGATATTTATGATAGGATTGAAGTTGCCGAAAGTATTTTTGATGGAAACGATACGATTGGACCATCGGCCGCCGGGTATGCTACGCCATATAGCAGAAGGAAACGAAGTGGGAAGAGACGAAGGAGACCAGGTCGTCCCACGCGTTCCAGGAGAGCTGTCTACAAGAACGGAGATGAGAATGTACCGGTCCGGAGTAACATACCCGCTAAGTCCATCAAATACATGCGGGATTTGGTGAATACTGTCATAAACAGCAAATGGCGTTTCATCATATTGCTGATGATCTGCGCTCATTTCGTGTTCTGGTTCATATTCGCTGGTATCTGGTACGCGGTGGCGACCTCTTACGCGGACGACATCGGGGACGGCAAGGAGCACTGCGTCACCGGTACCTCGTCTTTTGCAGGTCTACTTCTCATGACTATAGAGACACAGATGACAATCGGTTATGGATCGAGATATCCGAACGAAGAATGTCCTGAGGCGATCATTATCATGGTCTTCGAGATCGTAGCCGGGACTGCCTTATCCGGGGGACTGTCGAGCTTACTATTCACTAAACTGGTTCGACCAAATCGACACGTGTCATCGGTCGGCTTCAGCAAGAAGGCGACGGTATGCCTCCGTGATGGAGAATTATGCCTTCAGTTCAGAGTGTGGGACCTCCTCAACCTTCACATGATCGGCAGTACTATTACGGCATACATTTTGAAGCCAGTCAGAACTTTGGAAGGCGAGTTAGTCCACAACTACATTCATCAGCTGAAGCTGAAAGAGGCCCGGGCGTTCCTACTCTGGCCCATAACTGTGGTCCACGTGATCGACGCTGAGAGCCCATTGTACGACTTCTCCGCGCAAGACATGATGGATTACAGGTTCGAGATTGTGGTCTCCTTAACCGGTTCTTCAAAGAACATGGGAGCGGTTACCCAGAGTCGCACATCCTACTTGTCCAAAGAAATTATCTGGGGCTACAGATTCAAGAATGTTTTAAAGTATTCGAAAGAAAAGGAAGCCTATGCGATTGACATTGAAAACCTGGATACGGTGGAACAAGTCGAGACGCCACTCTGCAGCGCCTGCCGTCTCAAGGATTTCGAAGATAACATGAAAGACTCAAACACCCCAACCGTCTTGACCCAACAAATGTCCATTTCGCCAACAGACCTATCTTTAAGCCAGGAGGACTCTTCCACGATATCTAAAATCGGCGATTCTCTGCCGTCAAGTCCAACTCTGAACAGAACTGCCACCCAGAGGAGCTTTGGATGGAACTTTAGGAGATTTTATCCAGAGAAGTACGTTAATTATGGACAGGAACAAAAAGAGTTGAATGTTTTGAAGCAACAGATGTGA
Protein
MNIEPERRGSRSRALERSLSYSEAIRGGSGRSSIEIPNIVDTDVYSNEELKKHYRISQTYVEGREITFPSTITNVDTSPQVNVNAIASSQYSSEDETTDSGLVMTIDVEDTTKTSEVTKPLSDVTHTVVSSIPIDIYDRIEVAESIFDGNDTIGPSAAGYATPYSRRKRSGKRRRRPGRPTRSRRAVYKNGDENVPVRSNIPAKSIKYMRDLVNTVINSKWRFIILLMICAHFVFWFIFAGIWYAVATSYADDIGDGKEHCVTGTSSFAGLLLMTIETQMTIGYGSRYPNEECPEAIIIMVFEIVAGTALSGGLSSLLFTKLVRPNRHVSSVGFSKKATVCLRDGELCLQFRVWDLLNLHMIGSTITAYILKPVRTLEGELVHNYIHQLKLKEARAFLLWPITVVHVIDAESPLYDFSAQDMMDYRFEIVVSLTGSSKNMGAVTQSRTSYLSKEIIWGYRFKNVLKYSKEKEAYAIDIENLDTVEQVETPLCSACRLKDFEDNMKDSNTPTVLTQQMSISPTDLSLSQEDSSTISKIGDSLPSSPTLNRTATQRSFGWNFRRFYPEKYVNYGQEQKELNVLKQQM

Summary

Similarity
Belongs to the inward rectifier-type potassium channel (TC 1.A.2.1) family.
Pfam
PF17655   IRK_C        + More
PF01007   IRK
Interpro
IPR016449   K_chnl_inward-rec_Kir        + More
IPR041647   IRK_C       
IPR014756   Ig_E-set       
IPR040445   Kir_TM       
IPR013518   K_chnl_inward-rec_Kir_cyto       
SUPFAM
SSF81296   SSF81296       
Gene 3D
PDB
3SPJ     E-value=2.65898e-51,     Score=512

Ontologies

Topology

Subcellular location
Membrane  
Length:
585
Number of predicted TMHs:
2
Exp number of AAs in TMHs:
54.18143
Exp number, first 60 AAs:
0
Total prob of N-in:
0.86383
inside
1  -  222
TMhelix
223  -  245
outside
246  -  296
TMhelix
297  -  319
inside
320  -  585
 
 

Population Genetic Test Statistics

Pi
216.211142
Theta
177.196186
Tajima's D
1.114435
CLR
0.13698
CSRT
0.694865256737163
Interpretation
Uncertain
Copyright@ 2018-2023    Any Comments and suggestions mail to:zhuzl@cqu.edu.cn   渝ICP备19006517号

渝公网安备 50010602502065号