Gene

KWMTBOMO16440

Pre Gene Modal

BGIBMGA013823

Annotation

PREDICTED:_ELAV-like_protein_2_[Papilio_xuthus]

Location

Bomo_Chr28(-):10016762-10018283      View in EpiBrowser

Location in the cell

Mitochondrial   Reliability : 0.911

CDS

ATGTCGAAGGGCGACAGCGAGCAGCAGAACGGCTCCGGCGAGGAGTCCAAGACCAATCTGATCATCAACTACCTGCCCCAGAGCATGACCCAGGAAGAGATCCGCAGCCTCTTCTCGAGCATCGGTGAAGTGGAATCTTGCAAGTTGATCCGGAACAAGGGCGCGGCCTTCCCCGACGCGCTCAATCACGCTCTGCACGGCGGCGGACAGAGCCTCGGCTACGCCTTTGTCAACTATCACCGGCCCGAGGATGCGGAGAAGGCTATTGCGACCCTCAACGGCCTGCGTCTCCAGAACAAAACAATCAAAGTGTCGTACGCGCGCCCCAGCAGCGAGGCCATCAAAGGTGCCAATTTATACGTATCCGGTCTTCCCAAGACCATGACTCAGAGCGAGCTCGAGCGCCTGTTCAGTCCGTACGGGCGCATCATCACGTCGCGTATACTATGCGAGAACTCGGGCGGGCGGCCCTTCACCGGCGGCGAACAAGGTTTGTCCAAGGGCGTCGGCTTCATCCGCTTCGACCAGCGCGTGGAAGCGGAGCGAGCCATACAAGAGTTGAACGGCACCATACCGAAAGGAGCCAGCGAGCCTATAACAGTGAAGTTCGCGAATAACCCGAGCAACAACGGGAAGGCGCTAGCTCCGTTGGCGGCGTACCTACCAGCCGCGCTGCGGTTCCCCGCGCCGCTGGGCCGGTTCAGTTCAGGCAAGTCGCTTCTCGCTATAAACAAAGGATTACAGCGCTACAGCCCTCTCGCCGGCGAGTTACTCGGAGGGGTCCTGCCCGGCGCCGTGGGCTCGGAGTGGTGCATCTTCGTCTACAACTTAGCTCCCGAGACGGAAGAGAACGTGCTGTGGCAGCTGTTCGGGCCCTTCGGCGCGGTGCAGAGCGTGAAAGTGATCCGCGACCTGCAGACGAACAAGTGCAAGGGATACGGGTTCATCACGATGACCAACTACGACGAGGCTGTGGTCGCCATCCAGTCCCTGAACGGGTACACGCTCGGTAACAGAGTGCTGCAAGTCAGCTTCAAGACCAACAAGATAAAGACGATCTAA

Protein

MSKGDSEQQNGSGEESKTNLIINYLPQSMTQEEIRSLFSSIGEVESCKLIRNKGAAFPDALNHALHGGGQSLGYAFVNYHRPEDAEKAIATLNGLRLQNKTIKVSYARPSSEAIKGANLYVSGLPKTMTQSELERLFSPYGRIITSRILCENSGGRPFTGGEQGLSKGVGFIRFDQRVEAERAIQELNGTIPKGASEPITVKFANNPSNNGKALAPLAAYLPAALRFPAPLGRFSSGKSLLAINKGLQRYSPLAGELLGGVLPGAVGSEWCIFVYNLAPETEENVLWQLFGPFGAVQSVKVIRDLQTNKCKGYGFITMTNYDEAVVAIQSLNGYTLGNRVLQVSFKTNKIKTI

Uniprot

H9JWA9   A0A0N1PHT7   A0A194QEQ0   A0A2A4JZ37   A0A2H1VP98   A0A0L7LH58   + More
A0A212F1R7   A0A087ZTS9   A0A0L7RB98   A0A195D982   A0A023F5T6   A0A026WCC9   E2C5I2   A0A1B6LEB4   A0A1B6L707   A0A1B6MC15   A0A1B6EUI0   A0A1B6GJH1   A0A1B6IXA5   A0A1B6CCD8   A0A1B6FTM9   A0A1B6JXI7   A0A1B6K286   A0A1B6DPH5   A0A2H8TD63   A0A0A9XNL4   A0A151X4H5   A0A0A9WQK4   A0A195BR83   W8B765   V9I6M9   A0A0L0C3B0   A0A154PLR5   A0A067R4A9   V9I8A0   V9I6N2   A0A1I8Q1J1   A0A0Q9W7Y3   A0A1B0CNX6   V9I7T6   A0A0Q9XPV3   S6BW20   A0A1B0A194   A0A1I8Q1L8   A0A2A3EDH0   A0A0Q9XF76   A0A1A9YQG7   A0A0K8TL76   A0A034V4J7   K7IPW8   W8AKC4   A0A2R7WD77   A0A087SUZ8   A0A0A1WSN6   A0A0A1XJ57   A0A3B0KLA2   B5DNV4   B3MS25   A0A1S4FEF6   A0A061QLL4   A0A1I8MKP7   A0A1I8Q1M4   B4L604   A0A1W4VJY2   B4M748   B4Q1Z0   A0A0M4EU27   B4NEI3   B4JM01   B3NX84   E1NZB4   Q175F4   A0A1I8MKP3   Q16YJ6   A0A1I8Q1K5   A0A1Q3FNT3   A0A1Q3FNK7   A0A182H8F0   A0A023ERC3   A0A2M4AVH8   A0A182T4S0   A0A182RRC9   A0A3B0KRV0   A0A0R3P1Z1   A0A182KZ02   A0A182HRD2   A0A0N8NZT3   A0A2L2Y0N9   W5J3C3   A0A2L2Y3M6   A0A2M4BS40   A0A0Q9WVT0   A0A1W4VKQ0   A0A0Q5TKR8   Q9VYI0   A0A0R1EAH8   A0A1E1X282   A0A0Q9XEN8   A0A182IP13   B4IGK8  

Pubmed

19121390    26354079    26227816    22118469    25474469    24508170    + More
20798317    25401762    24495485    26108605    24845553    17994087    24382152    26369729    25348373    20075255    25830018    15632085    17510324    25315136    17550304    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    26483478    24945155    20966253    26561354    20920257    23761445    18057021    12324951    12591606    28503490   

EMBL

BABH01029363    KQ459670    KPJ20486.1    KQ459054    KPJ03899.1    NWSH01000388    + More
PCG76763.1    ODYU01003631    SOQ42628.1    JTDY01001148    KOB74740.1    AGBW02010820    OWR47685.1    KQ414617    KOC68197.1    KQ981153    KYN08964.1    GBBI01002170    JAC16542.1    KK107274    EZA53725.1    GL452770    EFN76795.1    GEBQ01018133    JAT21844.1    GEBQ01020683    JAT19294.1    GEBQ01006501    JAT33476.1    GECZ01028396    JAS41373.1    GECZ01007219    JAS62550.1    GECU01016121    JAS91585.1    GEDC01026181    GEDC01019872    JAS11117.1    JAS17426.1    GECZ01016221    JAS53548.1    GECU01003814    JAT03893.1    GECU01002152    JAT05555.1    GEDC01009775    JAS27523.1    GFXV01000238    MBW12043.1    GBHO01021277    JAG22327.1    KQ982548    KYQ55271.1    GBHO01033903    JAG09701.1    KQ976424    KYM88469.1    GAMC01017484    JAB89071.1    JR035790    JR035791    JR035792    JR035793    AEY56682.1    AEY56683.1    AEY56684.1    AEY56685.1    JRES01000955    KNC26820.1    KQ434977    KZC12821.1    KK852708    KDR18000.1    JR035794    JR035797    JR035798    JR035799    AEY56686.1    AEY56689.1    AEY56690.1    AEY56691.1    JR035795    JR035796    JR035800    JR035801    AEY56687.1    AEY56688.1    AEY56692.1    AEY56693.1    CH940653    KRF80738.1    AJWK01021069    AJWK01021070    JR035802    JR035803    JR035804    JR035805    AEY56694.1    AEY56695.1    AEY56696.1    AEY56697.1    CH933812    KRG07038.1    AB829504    AB829505    BAN59994.1    BAN59995.1    KZ288291    PBC29216.1    KRG07037.1    GDAI01002687    JAI14916.1    GAKP01021503    GAKP01021499    JAC37449.1    GAMC01017485    GAMC01017483    JAB89070.1    KK854488    PTY16275.1    KK112080    KFM56687.1    GBXI01012767    JAD01525.1    GBXI01003305    JAD10987.1    OUUW01000021    SPP89390.1    CH379065    EDY73206.1    CH902622    EDV34580.1    GBFC01000013    JAC59325.1    EDW05800.1    EDW62615.1    CM000162    EDX01511.1    CP012528    ALC48510.1    CH964239    EDW82152.1    CH916371    EDV91762.1    CH954180    EDV47256.1    BT125663    AE014298    ADN43900.1    AFH07361.1    AFH07363.2    AHN59643.1    CH477401    EAT41715.1    CH477515    EAT39711.1    GFDL01005902    JAV29143.1    GFDL01005898    JAV29147.1    JXUM01029111    KQ560843    KXJ80650.1    GAPW01001885    JAC11713.1    GGFK01011478    MBW44799.1    SPP89389.1    KRT07226.1    APCN01001689    KPU75204.1    IAAA01006536    LAA01731.1    ADMH02002138    ETN58341.1    IAAA01006537    LAA01735.1    GGFJ01006756    MBW55897.1    KRF99576.1    KQS30422.1    KQS30423.1    AF239667    BT120384    AAF43091.1    AAF48215.3    ABW09403.1    ADD16464.1    AFH07360.1    AFH07362.1    AGB95339.1    AGB95340.1    KRK06190.1    KRK06191.1    GFAC01005846    JAT93342.1    KRG07039.1    CH480836    EDW48958.1   

Proteomes

UP000005204    UP000053240    UP000053268    UP000218220    UP000037510    UP000007151    + More
UP000005203    UP000053825    UP000078492    UP000053097    UP000008237    UP000075809    UP000078540    UP000037069    UP000076502    UP000027135    UP000095300    UP000008792    UP000092461    UP000009192    UP000092445    UP000242457    UP000092443    UP000002358    UP000054359    UP000268350    UP000001819    UP000007801    UP000095301    UP000192221    UP000002282    UP000092553    UP000007798    UP000001070    UP000008711    UP000000803    UP000008820    UP000069940    UP000249989    UP000075901    UP000075900    UP000075882    UP000075840    UP000000673    UP000075880    UP000001292   

PRIDE

H9JWA9    E1NZB4    Q9VYI0   

Pfam

PF00076   RRM_1

Interpro

IPR012677   Nucleotide-bd_a/b_plait_sf        + More
IPR006548   ELAD_HU_SF       
IPR000504   RRM_dom       
IPR002343   Hud_Sxl_RNA       
IPR035979   RBD_domain_sf       
IPR034775   ELAV/Hu_RRM1       
IPR003954   RRM_dom_euk       

SUPFAM

SSF54928   SSF54928       

Gene 3D

3.30.70.330    

CDD

cd12650  RRM1_Hu

ProteinModelPortal

H9JWA9   A0A0N1PHT7   A0A194QEQ0   A0A2A4JZ37   A0A2H1VP98   A0A0L7LH58   + More
A0A212F1R7   A0A087ZTS9   A0A0L7RB98   A0A195D982   A0A023F5T6   A0A026WCC9   E2C5I2   A0A1B6LEB4   A0A1B6L707   A0A1B6MC15   A0A1B6EUI0   A0A1B6GJH1   A0A1B6IXA5   A0A1B6CCD8   A0A1B6FTM9   A0A1B6JXI7   A0A1B6K286   A0A1B6DPH5   A0A2H8TD63   A0A0A9XNL4   A0A151X4H5   A0A0A9WQK4   A0A195BR83   W8B765   V9I6M9   A0A0L0C3B0   A0A154PLR5   A0A067R4A9   V9I8A0   V9I6N2   A0A1I8Q1J1   A0A0Q9W7Y3   A0A1B0CNX6   V9I7T6   A0A0Q9XPV3   S6BW20   A0A1B0A194   A0A1I8Q1L8   A0A2A3EDH0   A0A0Q9XF76   A0A1A9YQG7   A0A0K8TL76   A0A034V4J7   K7IPW8   W8AKC4   A0A2R7WD77   A0A087SUZ8   A0A0A1WSN6   A0A0A1XJ57   A0A3B0KLA2   B5DNV4   B3MS25   A0A1S4FEF6   A0A061QLL4   A0A1I8MKP7   A0A1I8Q1M4   B4L604   A0A1W4VJY2   B4M748   B4Q1Z0   A0A0M4EU27   B4NEI3   B4JM01   B3NX84   E1NZB4   Q175F4   A0A1I8MKP3   Q16YJ6   A0A1I8Q1K5   A0A1Q3FNT3   A0A1Q3FNK7   A0A182H8F0   A0A023ERC3   A0A2M4AVH8   A0A182T4S0   A0A182RRC9   A0A3B0KRV0   A0A0R3P1Z1   A0A182KZ02   A0A182HRD2   A0A0N8NZT3   A0A2L2Y0N9   W5J3C3   A0A2L2Y3M6   A0A2M4BS40   A0A0Q9WVT0   A0A1W4VKQ0   A0A0Q5TKR8   Q9VYI0   A0A0R1EAH8   A0A1E1X282   A0A0Q9XEN8   A0A182IP13   B4IGK8  

PDB

1FNX     E-value=4.69136e-63,     Score=611

KEGG

101735317    K13208 ELAV like protein 2/3/4 | (RefSeq) ELAV-like protein 2

GO

GO:0003723   GO:0008266   GO:0005737   GO:0050684   GO:0008049   GO:0003729   GO:0051252   GO:0000166   GO:0003676   GO:0003677   GO:0043565   GO:0005839   GO:0051603   GO:0046835   GO:0006281   GO:0006259  

Length:

353

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.15051

Exp number, first 60 AAs:

0.00015

Total prob of N-in:

0.04825

outside

1  -  353

 

 

Pi

258.7311

Theta

208.725356

Tajima's D

0.774788

CLR

0

CSRT

0.598670066496675

Interpretation

Uncertain