Pre Gene Modal
BGIBMGA013824
Annotation
PREDICTED:_titin-like_isoform_X3_[Bombyx_mori]
Full name
Tetraspanin
Location in the cell
Nuclear Reliability : 4.002
Sequence
CDS
ATGGATGCTACATCTAACTCCCATCTTAAAAACTTAATTTTCTTCACAGAGACATTGACCCCCCCTCCTCCGGGCGGGTCCCCCTCCCCGCCCCCCGCCACGCCCCCGCTGCCGCCGCTGCGCACCGACACGGACGACGAGCTCGACCTCATCCTCGAGGACATCGACGAGATCCTCAGCGACGACGACGACACCGGACGGTTCAAGGCCAAATCGCAGCCAGAACCGGAGCCCAGCAAGAACCAGCTCGACCTCCGCTCCAAGCTGGCGCCGCGGAGCACCCTCACCCTCGCCGAGAGGAAGCAGGAGCGGCAGAAGATCATCTACAACGACGGCAGGGGCGACAAGAAAAACGACAAGTCGCCGCCCGCCAAGCCGCTGGTCTCGTCCACCAGGAGCGAGCCCGCTGACGTCGTGCCCAGGAAGATCGTTAAGGTGGCGCCGGCGGCGGAGGGCGCGGCCCCGCGGAACCGGCGAAGGATCGTTTTTGACACTAAAGAGCAAGAGAACCGCGACGACGACAAGAGGACGTTCTCGAACCGCCGCGTCATCCTGCAGCGGAAGGACAAGCCCCGCATTGAGATAAACAAGGAGGGGCTGGGGATGCTGAGCCGGGCGCTGCGTCGCGACCCCCCCGACCCCCCGCCGCCCGCCCCCCACGCCGCCACCGTCTCCAACCTGCCCTTCGGCATCACCGACACCAGGATCCGGACCCTCGCCGGCCCCCAGCTGCAGACGTTGGTACTGGATAAGGAAGAGCGCACAGCGAAGATAACGTTCAAGACCAAAGAAGCCGCGGAGATGTTTAAAAGGAAATTTAACAACAAAATGGTGGCGGCCAGCCGGCTCACCGTCGCACTGCTAGAGTGA
Protein
MDATSNSHLKNLIFFTETLTPPPPGGSPSPPPATPPLPPLRTDTDDELDLILEDIDEILSDDDDTGRFKAKSQPEPEPSKNQLDLRSKLAPRSTLTLAERKQERQKIIYNDGRGDKKNDKSPPAKPLVSSTRSEPADVVPRKIVKVAPAAEGAAPRNRRRIVFDTKEQENRDDDKRTFSNRRVILQRKDKPRIEINKEGLGMLSRALRRDPPDPPPPAPHAATVSNLPFGITDTRIRTLAGPQLQTLVLDKEERTAKITFKTKEAAEMFKRKFNNKMVAASRLTVALLE
Summary
Similarity
Belongs to the tetraspanin (TM4SF) family.
Uniprot
EMBL
Proteomes
Pfam
PF00335 Tetraspanin
Interpro
Gene 3D
ProteinModelPortal
Ontologies
GO
Topology
Subcellular location
Membrane
Length:
289
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00058
Exp number, first 60 AAs:
0.00058
Total prob of N-in:
0.05065
outside
1 - 289
Population Genetic Test Statistics
Pi
215.653893
Theta
163.134006
Tajima's D
0.772469
CLR
2.023961
CSRT
0.588720563971801
Interpretation
Uncertain
