SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO16432
Pre Gene Modal
BGIBMGA013870
Annotation
PREDICTED:_checkpoint_protein_HUS1_[Amyelois_transitella]
Full name
Checkpoint protein      
Location in the cell
Nuclear   Reliability : 3.127
 

Sequence

CDS
ATGAAATTCCGTGCTGTTATGAATAACTCTTCTCCAATACGCGAATTCTCAACTATTGTTAGTACAATATCAAAACTGTCTAAGGAGTGTGTCCTAAGGATAGCAGACGATATGTTGTATTTCATTGTCAGCGATGAAAACACTGGACCAGCCCCTCCGGTACTATGGTGTGAAATACCACAAAGTGTATTTTTCTCTGAATATCAATTGGTTGGAATGGATGAAACTCACCAAGACATTTATTTAGGATTGAATTCGGGTAATCTCGCAAGATCTTTTGTCTCCTTGAAAAATGTAAAATCATTAAAAATGAAGTTAACAAAGAAACAGTGTCCGTGCCTAACATTGGAAATTGAAGTGCCGTCTACAACCTCTCATCAGACGAGGCAGATTGTGCATGACATTCCAGTAGCAGTTGTGCCATGGAAAAACTGGCCAGACTTTTATGAACCCAGAGTACCAGATCCTGATATATCAATAGAATTACCAAGTTTGAAACAGCTACGTACAACAATAGATCGTATGAGAACGATGGCATCTGAGGTGATGGTGCGAGCTTCTGCTGGTGGTCAATTAATCTTACAGATCAGAGCAGACATGGCTAAAGTGTCTACAAGGTTTAAAGATTTGAATGTTGCTCATTTTGATGGCCCAGTAGACAATTCGGACCCTGAAACGGACAGCCAAGGAAATGAAGATAGCTCAGAAATAGTACAGTGTCGTGTTGACGCAAAGAAACTAGCACTTTTCTTGAACGTTGATCACATATCAACGAATACAACATTATGTAGTATTGTGCACAAGAGACTTGTGACATTGTGCTTACAGACAGATGATAATGTTAAATTGCAATGTTTCATAAGTGGAATTGTGTATTGA
Protein
MKFRAVMNNSSPIREFSTIVSTISKLSKECVLRIADDMLYFIVSDENTGPAPPVLWCEIPQSVFFSEYQLVGMDETHQDIYLGLNSGNLARSFVSLKNVKSLKMKLTKKQCPCLTLEIEVPSTTSHQTRQIVHDIPVAVVPWKNWPDFYEPRVPDPDISIELPSLKQLRTTIDRMRTMASEVMVRASAGGQLILQIRADMAKVSTRFKDLNVAHFDGPVDNSDPETDSQGNEDSSEIVQCRVDAKKLALFLNVDHISTNTTLCSIVHKRLVTLCLQTDDNVKLQCFISGIVY

Summary

Similarity
Belongs to the HUS1 family.
EMBL
ODYU01007096    SOQ49559.1    GDQN01002183    JAT88871.1    NWSH01000196    PCG78514.1    + More
RSAL01000157    RVE45561.1    KZ150002    PZC75281.1    KQ459463    KPJ00528.1    PCG78515.1    GAIX01012518    JAA80042.1    KQ971354    KYB26297.1    GEZM01057094    JAV72450.1    LJIG01001165    KRT85775.1    LSMT01000008    PFX33881.1    GBSI01001121    JAC95375.1    AGTO01011182    AKHW03000499    KYO46584.1    LMAW01002505    KQK80840.1    RQTK01000161    RUS85704.1    RCHS01001620    RMX52527.1    HAEF01008429    HAEG01004377    SBR46586.1    FR905132    CDQ76362.1    JT408086    JT413130    AHH38230.1    FX985750    BBA93637.1    KL889742    KGL77138.1    BT073238    ACO07662.1    AEFK01086447    AEFK01086448    GBKD01001009    JAG46609.1    LSYS01006073    OPJ76108.1    HADZ01000576    HAEA01017222    SBQ45703.1    QUSF01000013    RLW04360.1    KK543368    KFP31541.1    KK852680    KDR18613.1    HADY01004146    HAEJ01016728    SBS57185.1    KK501502    KFP15656.1    HAEB01006918    HAEC01016261    SBQ53445.1    KL670090    KFW78291.1    AKCR02000040    PKK24720.1    MUZQ01000301    OWK53193.1    HACG01017848    CEK64713.1    HAEH01006245    SBR78706.1    HAED01016290    SBR02735.1    KL206835    KFV86252.1    BC134133    AAI34134.1    ABQF01023845    ABQF01023846    CM012456    RVE59094.1    AC145931    KK662511    KFQ09104.1    KQ417429    KOF92006.1    KQ041022    KKF31417.1    HADW01013197    SBP14597.1    AERX01028249    KK719661    KFO64590.1    AY169966    AAO13094.1    NEVH01015817    PNF26711.1    KL385255    KFP89696.1    DS469509    EDO49542.1    KK107260    EZA54157.1    KL311152    KFP53144.1    ADON01064265    APGK01052269    KB741211    ENN72820.1    AGTP01012998    KB742991    EOB02150.1    KL410864    KFR00218.1   
Pfam
PF04005   Hus1
Interpro
IPR007150   Hus1/Mec3        + More
IPR016580   Cell_cycle_HUS1       
PDB
3G65     E-value=2.52983e-49,     Score=492

Ontologies

Topology

Length:
292
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.01505
Exp number, first 60 AAs:
0.000690000000000001
Total prob of N-in:
0.07772
outside
1  -  292
 
 

Population Genetic Test Statistics

Pi
312.967613
Theta
182.481871
Tajima's D
2.094245
CLR
0.019648
CSRT
0.895455227238638
Interpretation
Uncertain
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