SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO16427
Pre Gene Modal
BGIBMGA013865
Annotation
gloverin_4_precursor_[Bombyx_mori]
Full name
Gloverin      
Location in the cell
Cytoplasmic   Reliability : 1.277 Extracellular   Reliability : 1.28
 

Sequence

CDS
ATGAATTCCAAACTATTATATTTCTTCGCCACGGTCCTGGTGTGTGTCAACGCAGAAGTTTATTCGGAGTACGAAGAAGGATATCCAATTAGCGGTCAGTTCTCAAAGCGACACCCGCGTGACGTCACCTGGGATAAACAAGTGGGAGGAGGGAAGGTCTTCGGCACTCTGGGCCAAAACGATGATGGGCTTTTTGGTAAAGCCGGTTACAACAGAGAGATCTTCAATGATGACCGCGGCAAATTGACCGGGCAGGCCTACGGCACCAGGGTCCTGGGACCCGCAGGGGACAGTACAAACTACGGTGGACGTCTAGACTGGGCCAATAAGAATGCGGAAGCTGCTATTGATATAAATAGACAGATCGGAGGCAGATCTGGAATGACAGCAACAGGTTCAGGAGTGTGGGATCTTGACAAGAACACCCGCCTCTCAGCCGGCGGTATGATCTCGAAGGAATTCGGTCACAGAAGACCGGACGTCGGCGTCCAGGCAGAGTTCCGCCATGATTGGTGA
Protein
MNSKLLYFFATVLVCVNAEVYSEYEEGYPISGQFSKRHPRDVTWDKQVGGGKVFGTLGQNDDGLFGKAGYNREIFNDDRGKLTGQAYGTRVLGPAGDSTNYGGRLDWANKNAEAAIDINRQIGGRSGMTATGSGVWDLDKNTRLSAGGMISKEFGHRRPDVGVQAEFRHDW

Summary

Keywords
Antibiotic   Antimicrobial   Direct protein sequencing   Immunity   Innate immunity   Secreted  
Feature
chain  Gloverin
EMBL
BABH01029285    AB186418    AB289657    BAE53373.1    BAF63528.1    KT159925    + More
ANS56423.1    AB190866    BAD51476.1    AB190865    BAD51475.1    BABH01025576    AB289656    BAF63527.1    AB190864    BAD51474.1    BABH01020272    AB186417    AB239448    BAE53372.1    BAF51564.1    KT159923    ANS56421.1    KT159924    ANS56422.1    BABH01029283    KT159922    ANS56420.1    AB190863    BAD51473.1    AB289654    BAF63526.1    EU557310    ACB45565.1    DQ666495    ABG72699.1    AY232303    AAO74639.1    AM293324    CAL25129.1    RSAL01000157    RVE45572.1    KF724966    AHC94952.1    KZ150002    PZC75292.1    KT346373    ALT16898.1    NWSH01000488    PCG76058.1    FJ546344    ACR78446.1    KP056508    AKJ54490.1    HM595744    ADL27731.1    ODYU01001626    SOQ38113.1    ODYU01001627    SOQ38117.1    PZC75293.1    AF233590    AAG44367.1    PCG76057.1    DQ666496    ABG72700.1    AM293319    CAL25124.1    AK402151    BAM18773.1    SOQ38116.1    NWSH01002731    PCG67614.1    PZC75294.1    ODYU01003493    SOQ42363.1    KQ459547    KPJ00058.1    KU950738    AMY60406.1    FJ619624    ACM69342.1    EU016389    ABV68856.1    AGBW02013581    OWR43200.1    AGBW02014422    OWR41701.1    AGBW02012939    OWR44196.1    KQ460427    KPJ14762.1    KQ459602    KPI93214.1    MG770225    AYM26645.1   
Pfam
PF10793   Gloverin        + More
PF03769   Attacin_C
PF03768   Attacin_N
Interpro
IPR019729   Gloverin-like_protein        + More
IPR040428   Attacin/Sarcotoxin-2       
IPR005520   Attacin_N       
IPR005521   Attacin_C       

Ontologies

Topology

Subcellular location
Secreted  
SignalP
Position:   1 - 18,         Likelihood:  0.995624
 
 
Length:
171
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.59687
Exp number, first 60 AAs:
0.59687
Total prob of N-in:
0.06723
outside
1  -  171
 
 

Population Genetic Test Statistics

Pi
70.089807
Theta
116.384831
Tajima's D
-1.21898
CLR
224.528104
CSRT
0.0965951702414879
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
Copyright@ 2018-2023    Any Comments and suggestions mail to:zhuzl@cqu.edu.cn   渝ICP备19006517号

渝公网安备 50010602502065号