SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO16426
Pre Gene Modal
BGIBMGA013864
Annotation
gloverin_4_precursor_[Bombyx_mori]
Full name
Gloverin      
Location in the cell
Mitochondrial   Reliability : 1.513
 

Sequence

CDS
ATGGTTGTCAATACCCAATCATTACTTCTCCCCGGTTACAACAGAGAGATCTTCAATGATGACCGCGGCAAATTGACCGGGCAGGCCTACGGCACCAGGGTCCTGGGACCCGCAGGGGACAGTACAAACTACGGTGGACGTCTAGACTGGGCCAATAAGAATGCGGAAGCTGCTATTGATATAAATAGACAGATCGGAGGCAGATCTGGAATGACAGCAACAGGTTCAGGAGTGTGGGATCTTGACAAGAACACCCGCCTCTCAGCCGGCGGTATGATCTCGAAGGAATTCGGTCACAGAAGACCGGACGTCGGCGTCCAGGCAGAGTTCCGCCATGATTGGTGA
Protein
MVVNTQSLLLPGYNREIFNDDRGKLTGQAYGTRVLGPAGDSTNYGGRLDWANKNAEAAIDINRQIGGRSGMTATGSGVWDLDKNTRLSAGGMISKEFGHRRPDVGVQAEFRHDW

Summary

Keywords
Antibiotic   Antimicrobial   Direct protein sequencing   Immunity   Innate immunity   Secreted  
Feature
chain  Gloverin
EMBL
BABH01029283    BABH01029284    BABH01029285    AB186418    AB289657    BAE53373.1    + More
BAF63528.1    AB190866    BAD51476.1    KT159925    ANS56423.1    KT159924    ANS56422.1    BABH01025576    AB289656    BAF63527.1    AB190865    BAD51475.1    AB190864    BAD51474.1    BABH01020272    AB186417    AB239448    BAE53372.1    BAF51564.1    KT159923    ANS56421.1    AB289654    BAF63526.1    KT159922    ANS56420.1    AB190863    BAD51473.1    KF724966    AHC94952.1    RSAL01000157    RVE45572.1    AM293319    CAL25124.1    DQ666495    ABG72699.1    EU557310    ACB45565.1    AY232303    AAO74639.1    AM293324    CAL25129.1    KZ150002    PZC75292.1    KT346373    ALT16898.1    NWSH01000488    PCG76058.1    KP056508    AKJ54490.1    HM595744    ADL27731.1    FJ546344    ACR78446.1    DQ666496    ABG72700.1    PZC75294.1    NWSH01002731    PCG67614.1    KF527285    AGW80664.1    ODYU01001626    SOQ38113.1    ODYU01001627    SOQ38117.1    SOQ38116.1    ODYU01003493    SOQ42363.1    GU182908    ADR51146.1    PCG76057.1    PZC75293.1    AF233590    AAG44367.1    AK402151    BAM18773.1    EU016389    ABV68856.1    KU950738    AMY60406.1    KQ459547    KPJ00058.1    FJ619624    ACM69342.1    AGBW02013581    OWR43200.1    KQ460427    KPJ14762.1    KQ459602    KPI93214.1    MG770225    AYM26645.1   
Pfam
PF10793   Gloverin        + More
PF03769   Attacin_C
PF03768   Attacin_N
Interpro
IPR019729   Gloverin-like_protein        + More
IPR040428   Attacin/Sarcotoxin-2       
IPR005520   Attacin_N       
IPR005521   Attacin_C       

Ontologies

Topology

Subcellular location
Secreted  
Length:
114
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00034
Exp number, first 60 AAs:
0.00018
Total prob of N-in:
0.09577
outside
1  -  114
 
 

Population Genetic Test Statistics

Pi
60.451363
Theta
88.34176
Tajima's D
-1.20771
CLR
481.635841
CSRT
0.0992950352482376
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
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