SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO16406
Pre Gene Modal
BGIBMGA013838
Annotation
PREDICTED:_uncharacterized_protein_C17orf104_homolog_[Amyelois_transitella]
Location in the cell
Nuclear   Reliability : 3.768
 

Sequence

CDS
ATGGCCTTCAGTGATTTGTGTCACATAGGGAATGCGTACAAAACAGTCGAAAATGAATCAGACCAGTCAGAACGCATTATGGAGGAGAACTCGATTGTACGAGACCTCATCACAAAGATCCTTGATGAATCTGTACCCACAGAAGGCGGCAGCACTGCACAATCATCGGAAAAAAGTTTAAATAGCTTACAACAGAATTATCAGAAGAACGAAACGGGGAGCCCGTCGTACGCATCGCCTTCGTATTACCAGAACAATTTGTATTTCAATCAGAACGAACAAAACGGCTTCAACAATTTCAATATTCAGAACGGTTTCGGTGGTAACAATGGTTTCGTCAATTACGCGGACAACGACGTTAATCTACTCGGTCTGGAGCCGGTCCCTGACGCAGGCCCAGATGCGGTCACCCCTGAGCAGCTGAACCTTCTGAGGCTGGCCGCACAGGAAATCGGAGGAGCACAGTTCACAAGCCCTAACGCTTTCGATGACAAATTCTATAACTTCTTCGAGCCCAGCCAAAGAAACTCCCTGCCCGATACCAATATGTTTCAAGTCAACGATTACAGTCGACCGAACAGTTTGAACTTGGACATGAGCCTGAACGCAAATTACGATTATAACAATCAGAGATACCCGAACTATAAAGACCAGAGTCAAGATCCGACGCAAATATTGCAGTATCTGAACCAATTGAACATATCCTTGGACCGAAATAGAGAAGAAAGCGCAGTTAATAACATGGATTTCAAGATGCCAATGGATTTAAACGGTCCATATCAGCATGAGCAGTTCAATAAGCCGGCGGACGATAAAATGTTCTATAGGGGCTACCAACAGCCGCCGCCGAATAAGAGTTTTGGCGACAATTTCTATGACGTAATGCCGATGAGTGACCGAAGCCCACTGACCCAGGGCTTCGACTACACGAACCAGACGCCAACCGGTGTCAACTACAACACTAACGTCTTCAACCAGAATGACTTCATGCAGAGGCGCGACATGAACGCATTCCCGAGTAATGGCGTAATAAACGAACAGAGAAACAGTTTTGAGAATATAGGGAGGGAGAATAACATGCAGCAAGCGTCGGTCGTGCGGCAGAACCAGGAGCTAGCGCGGCAGATGAGCCTCCTGATGCGGACCCGGCCTCCGCCCAACCAGCTCAATGTGGACGTCTCGTTTCTGCACGACAACGCACCTTACAATATCGGTCTCGGAGCCCTGTTAGGCGCGAGTCCATCCGTCCCGCCTCCAGTGTTGCCATCACCAATGTTGGATTTACCGCTTTTGGCACCGTTCTACGCAATGAGAAATATGAGGGGCGGCGCGTCGTCGTCGTCGCTGCTGCACGCGCGGCTGGAGGCGTGCTACGAGCAGTGGCGCCAGCTGGAGCGCGAGCGGAAGCGCACGGAGGCCCGCCTGGCGCTCGCCTACCCCGGCCGCGCCGTCTCCTCCTCCAACTCCATCCCCGTGCCGCGCCTGCCGCCCTGCCCCACCAGGGTCGACAGGCTCACCGTCGACATGCTCCGGGAGCACACCAAGGTGCTGACGCTTATGGGCAAGATGGAAACGTTAAGAGCGAGCGTTTGTGCGAATCACAAGAAGAACAAACCGGACGACACAAAGATAACGGTGTTGAAGAGGGGACAAGAGAACGTGGTCAGTGAGAAGCAGAAGGAGAAGGAGACCGGCTGCGACCCGGCCACCTTCGATCCCTCCACTTGGAGAGACGATATCAAGAATTTAGCTGAGATCGCGCCGCACGGAGAGGTGGAGAGCGCCATGGTGGCGTGGCGCAGCGCCGTGGGAGGCGTGCAGGCCGCGCGCCGCCGCGAGCTCGCCCAGCCGCAGCGCGCGCGCCCCGACCCGATCCTGCAGCTGGCGGAGGCGGTGAAGCAGCTGTGCGCATGCGCGCGGCGGGCCCGCTGCGCCATGTGGTGCGACCTCACGCTCACCGTGGCGCTGGCGCCACACCACGCGCGGAGTGAAGCATCTCAACCCGCCTCCCAACAAGCGTCGCCATCCAAACAAGCACCGGACCTCTCAAACCCTCCGAGTGTCTCCACCCAGGCAGCTCCGAAGCAGTCCACTGAAGTCAAAGAGGGAACCCCGTCCGCCGTCGAACCAAAGCCGGAACCTAAGCCGGACGCGACCAAAGTTCCGAACAAACCAGCCGACAAGCAAGACAAGAGCCGCCGCGCCCAGTACCGCAAGGTCAACCGCGGCGACCTCTACGCCAAGAGCCAGAGGTACGACGCGAGGTTCGTGCCGAACAGACACCCGTACCACTACCTGGCCACCGGACCCATTAATTAA
Protein
MAFSDLCHIGNAYKTVENESDQSERIMEENSIVRDLITKILDESVPTEGGSTAQSSEKSLNSLQQNYQKNETGSPSYASPSYYQNNLYFNQNEQNGFNNFNIQNGFGGNNGFVNYADNDVNLLGLEPVPDAGPDAVTPEQLNLLRLAAQEIGGAQFTSPNAFDDKFYNFFEPSQRNSLPDTNMFQVNDYSRPNSLNLDMSLNANYDYNNQRYPNYKDQSQDPTQILQYLNQLNISLDRNREESAVNNMDFKMPMDLNGPYQHEQFNKPADDKMFYRGYQQPPPNKSFGDNFYDVMPMSDRSPLTQGFDYTNQTPTGVNYNTNVFNQNDFMQRRDMNAFPSNGVINEQRNSFENIGRENNMQQASVVRQNQELARQMSLLMRTRPPPNQLNVDVSFLHDNAPYNIGLGALLGASPSVPPPVLPSPMLDLPLLAPFYAMRNMRGGASSSSLLHARLEACYEQWRQLERERKRTEARLALAYPGRAVSSSNSIPVPRLPPCPTRVDRLTVDMLREHTKVLTLMGKMETLRASVCANHKKNKPDDTKITVLKRGQENVVSEKQKEKETGCDPATFDPSTWRDDIKNLAEIAPHGEVESAMVAWRSAVGGVQAARRRELAQPQRARPDPILQLAEAVKQLCACARRARCAMWCDLTLTVALAPHHARSEASQPASQQASPSKQAPDLSNPPSVSTQAAPKQSTEVKEGTPSAVEPKPEPKPDATKVPNKPADKQDKSRRAQYRKVNRGDLYAKSQRYDARFVPNRHPYHYLATGPIN

Summary

Pfam
PF15189   MEIOC
Interpro
IPR027963   MEIOC       

Ontologies

Topology

Length:
772
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00049
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00004
outside
1  -  772
 
 

Population Genetic Test Statistics

Pi
269.554383
Theta
206.606362
Tajima's D
1.316428
CLR
0.045137
CSRT
0.740312984350782
Interpretation
Uncertain
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