Gene

KWMTBOMO16405  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA013854

Annotation

PREDICTED:_elongation_factor_Tu-like_[Amyelois_transitella]

Location

Bomo_Chr28(+):8569395-8576907      View in EpiBrowser

Full name

Elongation factor Tu      

Location in the cell

Mitochondrial   Reliability : 2.086

CDS

ATGTCCTGCAGATTAATTTTACGATCAATATATTATCAGTGTAAGAAAAACACATCATTTAGTTGTAGTTCTTACATAAAAACCCGTTTTAATGGCTTAGTACAATTGGAATTAAGAAACTTCAGTACCAAGCCTAAAAGTGATGTAACAGAAAAAAAACACTGCAACGTTGGGACAATAGGACACGTAGACCACGGGAAGACGACTCTTACAGCCGCTATCACGAAAGTACTGGCGAAAGACGGTCTAGCAAACTATGTGTCATATGACGAGATTGATAAAGCACCGGAGGAGAAAGCTCGCGGTATTACAATTAATGCTGCTCACGTCGGTTATAGTACTAAGCTACGTCATTATGCACATACGGATTGTCCTGGTCATGCAGACTATGTACGTAACATGATATCCGGAGCTTCACAGATGGATGCCGCTATATTAGTGGTAGCCGCAGATGACGGACCCATGCCGCAAACTCGAGAGCATCTGCTGCTAGCAAAACAAGTTGGCATACGCTACGTTCTAGTGTTTATCAACAAAGCAGATATTGTTAATGATGAGATTATTGAACTGGTCGAAATAGAAATGCGTGAGTTGCTCTCGGACTTCGGCTACGACAGCGACGGCGCCCCGCTGATCTGTGGGTCGGCCCTGCGGGCGCTCCAAGGGGACCCCTCCGAACACGGTGTGCCTTCAGTGCAAAGACTTCTTGACGCTATGGACGAGTACATCCCCCGGATAGTGAGGGACGTGACGTCACCATTCCTGATGCCCATAGACAATGCGTTCACGGTGCCCGGGAGGGGAACCGTGGTGGTGGGCACCATAAAGAGGGGGGTGATGAAGCGAAACGATGACGCTGACCTCATGGGATTCGGATATAATATCAAGACCACGCTATCAGACATACAGATATTTAGGAAGAGCGTCCCGGAGGCGATAGCTGGTGATAATGTGGGGGTGCTGTTGAGAGGCATGAAGATACGCTCCGTGGAGACCGGCATGCTGCTCTGCGCCGCCAGGAGTATGAAGATGACGAATCACTACAAGGCGAACATCTACTTCTTAACTCGAAGCGAAGGAGGCAGGAAGAAGCCGGTCTTCTCTAAATATTCGCAGCAAATGTTCAGTGGGACTTGGAACATCGCATGCAGAATCGATTTGGAACCATCAATGCACATGATGATGCCGGGAGACCACGGCGAAGTGTACCTCACGCTGCTGGAGGACATGGTGATGACGCAGGGACAACCCTTCACCATCAGGGAGAACAATGTGACGGTCGCGACCGGCATCGTCACGGAGACCCTCTCCTCGGTGGACGTGCCGAAAGGGAAATTAGGGAAAGTTGAGTTGAAACTCGATTGA

Protein

MSCRLILRSIYYQCKKNTSFSCSSYIKTRFNGLVQLELRNFSTKPKSDVTEKKHCNVGTIGHVDHGKTTLTAAITKVLAKDGLANYVSYDEIDKAPEEKARGITINAAHVGYSTKLRHYAHTDCPGHADYVRNMISGASQMDAAILVVAADDGPMPQTREHLLLAKQVGIRYVLVFINKADIVNDEIIELVEIEMRELLSDFGYDSDGAPLICGSALRALQGDPSEHGVPSVQRLLDAMDEYIPRIVRDVTSPFLMPIDNAFTVPGRGTVVVGTIKRGVMKRNDDADLMGFGYNIKTTLSDIQIFRKSVPEAIAGDNVGVLLRGMKIRSVETGMLLCAARSMKMTNHYKANIYFLTRSEGGRKKPVFSKYSQQMFSGTWNIACRIDLEPSMHMMMPGDHGEVYLTLLEDMVMTQGQPFTIRENNVTVATGIVTETLSSVDVPKGKLGKVELKLD

Description

This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis.

Similarity

Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-Tu/EF-1A subfamily.

Uniprot

H9JWE0   A0A3S2LTQ5   A0A2W1BHK3   A0A2H1VDJ0   A0A0N0P9P5   A0A212F5L4   + More
A0A1B0CFA8   A0A0J9TVD3   A0A0A1XDF3   Q7K3V6   B4H8K6   A0A0M3QVH9   A0A1W4VCF1   B4HQV9   B3N9Y1   Q28YI3   B4P1Q6   D6WPW8   A0A0K8VH04   A0A034W4T8   B4J9Z8   B4LLC6   B4KQ95   A0A1W4W804   A0A3B0JQR7   B3MGV1   A0A182VCM9   W8BJV6   A0A182LBD0   A0A182XJA0   A0A1A9XN85   A0A067QQD9   A0A182U9M0   A0A182IPS5   A0A2M4BMI8   A0A182QPC9   A0A1B0D1H8   A0A0L0C806   A0A1A9ZND5   A0A182HP62   A0A182FH91   A0A2M4BN98   Q7Q9P0   A0A182RTP7   A0A1Q3F6I2   A0A182K141   A0A2M4BML5   A0A1Y1MTE6   W5J653   B0W5G0   D3TLT5   A0A182PHE1   A0A182MRT9   A0A182N800   A0A182YNS1   Q16MW4   A0A1S4FVU5   A0A1A9USP6   A0A182SSG1   A0A1I8M4A3   A0A2P8ZHA4   A0A1I8P1X1   A0A182WAB3   A0A1B0G5U4   A0A1J1J3X6   A0A2J7PJA3   A0A2S2Q7N8   A0A336MPT5   A0A336LPH1   A0A1B6J0A2   B4MNZ3   T1HMS7   J9JME1   E9GPU8   A0A2R7WW46   A0A1D2MR35   A0A069DYV8   J3JVM3   A0A1B6GLH8   A0A0P5AHS9   A0A0P5A9A6   A0A1B6L7Z6   A0A0P5KY12   A0A0P5NWN2   A0A0P5P5Q4   A0A0P5U4W2   A0A0P5N857   A0A0P6JTB3   A0A0N8DXK8   A0A0P5C3H6   A0A0P5BIW8   A0A0P5UWF9   A0A0P6AMH1   A0A023F513   A0A0P6D7N4   A0A0N8BI05   A0A0P5VUR0   A0A0P6DUH1   A0A0P4W379   A0A1S3DU72  

Pubmed

19121390    28756777    26354079    22118469    22936249    25830018    + More
10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    17994087    15632085    17550304    18362917    19820115    25348373    24495485    20966253    24845553    26108605    12364791    14747013    17210077    28004739    20920257    23761445    20353571    25244985    17510324    25315136    29403074    21292972    27289101    26334808    22516182    25474469   

EMBL

BABH01029206    BABH01029207    RSAL01000236    RVE43722.1    KZ150201    PZC72280.1    + More
ODYU01001729    SOQ38324.1    KQ459547    KPJ00040.1    AGBW02010189    OWR48999.1    AJWK01009881    AJWK01009882    AJWK01009883    CM002911    KMY92005.1    GBXI01005307    JAD08985.1    AE013599    AY058330    BT010319    AAF59240.1    AAL13559.1    AAQ23637.1    CH479223    EDW35041.1    CP012524    ALC42413.1    CH480816    EDW46769.1    CH954177    EDV59677.1    CM000071    EAL25982.2    CM000157    EDW89192.2    KQ971354    EFA06887.2    GDHF01014143    JAI38171.1    GAKP01009238    JAC49714.1    CH916367    EDW02585.1    CH940648    EDW61878.1    CH933808    EDW09223.1    OUUW01000001    SPP75706.1    CH902619    EDV37869.1    GAMC01013039    JAB93516.1    KK853579    KDR06559.1    GGFJ01005155    MBW54296.1    AXCN02000910    AJVK01022029    JRES01000780    KNC28386.1    APCN01002921    GGFJ01005333    MBW54474.1    AAAB01008900    EAA09467.4    GFDL01011879    JAV23166.1    GGFJ01005154    MBW54295.1    GEZM01021539    JAV88953.1    ADMH02002078    ETN59466.1    DS231842    EDS35280.1    EZ422387    ADD18663.1    AXCM01001928    CH477847    EAT35680.1    PYGN01000057    PSN55885.1    CCAG010007472    CVRI01000066    CRL06158.1    NEVH01024950    PNF16393.1    GGMS01004428    MBY73631.1    UFQT01001876    SSX32070.1    UFQT01000040    SSX18583.1    GECU01015101    JAS92605.1    CH963848    EDW73832.1    ACPB03003848    ABLF02026347    GL732557    EFX78443.1    KK855754    PTY23764.1    LJIJ01000669    ODM95456.1    GBGD01001715    JAC87174.1    BT127291    AEE62253.1    GECZ01006467    JAS63302.1    GDIP01203935    GDIQ01161472    GDIP01062861    LRGB01001581    JAJ19467.1    JAK90253.1    KZS11045.1    GDIP01202333    JAJ21069.1    GEBQ01020323    JAT19654.1    GDIQ01177618    JAK74107.1    GDIQ01158124    JAK93601.1    GDIQ01139724    JAL12002.1    GDIP01119605    JAL84109.1    GDIQ01145793    JAL05933.1    GDIQ01009237    JAN85500.1    GDIQ01082004    JAN12733.1    GDIP01176088    JAJ47314.1    GDIP01188188    JAJ35214.1    GDIP01107753    JAL95961.1    GDIP01027406    JAM76309.1    GBBI01002574    JAC16138.1    GDIQ01083656    JAN11081.1    GDIQ01175819    JAK75906.1    GDIP01095000    JAM08715.1    GDIQ01076150    JAN18587.1    GDRN01091344    JAI60285.1   

Proteomes

UP000005204    UP000283053    UP000053268    UP000007151    UP000092461    UP000000803    + More
UP000008744    UP000092553    UP000192221    UP000001292    UP000008711    UP000001819    UP000002282    UP000007266    UP000001070    UP000008792    UP000009192    UP000192223    UP000268350    UP000007801    UP000075903    UP000075882    UP000076407    UP000092443    UP000027135    UP000075902    UP000075880    UP000075886    UP000092462    UP000037069    UP000092445    UP000075840    UP000069272    UP000007062    UP000075900    UP000075881    UP000000673    UP000002320    UP000075885    UP000075883    UP000075884    UP000076408    UP000008820    UP000078200    UP000075901    UP000095301    UP000245037    UP000095300    UP000075920    UP000092444    UP000183832    UP000235965    UP000007798    UP000015103    UP000007819    UP000000305    UP000094527    UP000076858    UP000079169   

PRIDE

H9JWE0    Q7K3V6   

Pfam

PF03143   GTP_EFTU_D3        + More
PF03144   GTP_EFTU_D2
PF00009   GTP_EFTU
PF00400   WD40
PF11816   DUF3337
PF10545   MADF_DNA_bdg
PF00096   zf-C2H2

Interpro

IPR004161   EFTu-like_2        + More
IPR033720   EFTU_2       
IPR041709   EF-Tu_GTP-bd       
IPR031157   G_TR_CS       
IPR000795   TF_GTP-bd_dom       
IPR005225   Small_GTP-bd_dom       
IPR009001   Transl_elong_EF1A/Init_IF2_C       
IPR009000   Transl_B-barrel_sf       
IPR027417   P-loop_NTPase       
IPR004160   Transl_elong_EFTu/EF1A_C       
IPR036322   WD40_repeat_dom_sf       
IPR017986   WD40_repeat_dom       
IPR020472   G-protein_beta_WD-40_rep       
IPR021772   WDR48/Bun107       
IPR019775   WD40_repeat_CS       
IPR015943   WD40/YVTN_repeat-like_dom_sf       
IPR001680   WD40_repeat       
IPR004541   Transl_elong_EFTu/EF1A_bac/org       
IPR013087   Znf_C2H2_type       
IPR006578   MADF-dom       
IPR036236   Znf_C2H2_sf       

SUPFAM

SSF52540   SSF52540        + More
SSF50465   SSF50465       
SSF50447   SSF50447       
SSF50978   SSF50978       
SSF57667   SSF57667       

Gene 3D

2.130.10.10    

CDD

cd03697  EFTU_II
cd01884  EF_Tu

ProteinModelPortal

H9JWE0   A0A3S2LTQ5   A0A2W1BHK3   A0A2H1VDJ0   A0A0N0P9P5   A0A212F5L4   + More
A0A1B0CFA8   A0A0J9TVD3   A0A0A1XDF3   Q7K3V6   B4H8K6   A0A0M3QVH9   A0A1W4VCF1   B4HQV9   B3N9Y1   Q28YI3   B4P1Q6   D6WPW8   A0A0K8VH04   A0A034W4T8   B4J9Z8   B4LLC6   B4KQ95   A0A1W4W804   A0A3B0JQR7   B3MGV1   A0A182VCM9   W8BJV6   A0A182LBD0   A0A182XJA0   A0A1A9XN85   A0A067QQD9   A0A182U9M0   A0A182IPS5   A0A2M4BMI8   A0A182QPC9   A0A1B0D1H8   A0A0L0C806   A0A1A9ZND5   A0A182HP62   A0A182FH91   A0A2M4BN98   Q7Q9P0   A0A182RTP7   A0A1Q3F6I2   A0A182K141   A0A2M4BML5   A0A1Y1MTE6   W5J653   B0W5G0   D3TLT5   A0A182PHE1   A0A182MRT9   A0A182N800   A0A182YNS1   Q16MW4   A0A1S4FVU5   A0A1A9USP6   A0A182SSG1   A0A1I8M4A3   A0A2P8ZHA4   A0A1I8P1X1   A0A182WAB3   A0A1B0G5U4   A0A1J1J3X6   A0A2J7PJA3   A0A2S2Q7N8   A0A336MPT5   A0A336LPH1   A0A1B6J0A2   B4MNZ3   T1HMS7   J9JME1   E9GPU8   A0A2R7WW46   A0A1D2MR35   A0A069DYV8   J3JVM3   A0A1B6GLH8   A0A0P5AHS9   A0A0P5A9A6   A0A1B6L7Z6   A0A0P5KY12   A0A0P5NWN2   A0A0P5P5Q4   A0A0P5U4W2   A0A0P5N857   A0A0P6JTB3   A0A0N8DXK8   A0A0P5C3H6   A0A0P5BIW8   A0A0P5UWF9   A0A0P6AMH1   A0A023F513   A0A0P6D7N4   A0A0N8BI05   A0A0P5VUR0   A0A0P6DUH1   A0A0P4W379   A0A1S3DU72  

PDB

1XB2     E-value=3.44228e-121,     Score=1114

KEGG

101740634    K02358 elongation factor Tu | (RefSeq) elongation factor Tu, mitochondrial-like

GO

GO:0005525   GO:0003924   GO:0003746   GO:0005739   GO:0006414   GO:0070125   GO:0003676   GO:0016021   GO:0046872   GO:0033557   GO:0005839   GO:0051603   GO:0046835   GO:0006281   GO:0006259  

Length:

454

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00619999999999999

Exp number, first 60 AAs:

0.00037

Total prob of N-in:

0.00359

outside

1  -  454

 

 

Pi

186.422346

Theta

142.33982

Tajima's D

1.931492

CLR

0.068028

CSRT

0.867606619669017

Interpretation

Uncertain