Silkworm Genome Informatics Database

Gene

KWMTBOMO16396 Validated by peptides from experiments

Pre Gene Modal

BGIBMGA013842

Annotation

PREDICTED:_cleavage_and_polyadenylation_specificity_factor_subunit_1_[Bombyx_mori]

Location

Bomo_Chr28(-):8433193-8465184 View in EpiBrowser

Full name

Cleavage and polyadenylation specificity factor subunit 1

Alternative Name

Cleavage and polyadenylation specificity factor 160 kDa subunit

Location in the cell

PlasmaMembrane Reliability : 2.269

CDS

ATGTTTTCGATTTGTCGAACGACTCATCCAGCGACTGGTATAGAGCACGCGGTTAGCTGTTATTTCTTTAACAATGACGAGGTTTGTCTGGTCACCGCCGGTGCCAATATCATCAAGGTCTTCAGGCTGCTGCCCGAAGGCCACACAAAAGAGATTAATGCAGCCGGTCAGCCGATTCCCCCGAAGATGAAGTTGGAATGCTTAGCGACATATACATTATGGGGTAATGTGATGTCTTTAGCTTCTGTACGCTGTCAAAGTTCTGGTCGAGATATCCTGTTGGTTTCATTCAAAGAAGCTAAACTATCTGTGCTCCAATATGATCCACAGACCAATAACTTGGTGACATTGAGTATGCATTATTTTGAAGAGGATGATATGAAGGGCGGTTGGACAACTCATCCTCATATACCATGGATCAGAGTAGATCCTGAGTTCCGATGTGCTGTGATGTTGTTGTATGGGAAGAAACTTGCAGTCCTTCCGTTTAGGAAGGACATTACCTCTGAAGAAGGGGATCCTCTTGAGGCCAAACCCCTCTCTGACACAAAGAAAAATCAAGCAGCTCATACTATGAACAGGGCACCAACACTGGCCTCATACATAATAATACTCAAGGACCTAGACGAGAAGATTGATAACATATTAGACATACAATTCTTGCATGGCTATTACGAGCCTACTTTGCTACTGCTCTATGAGCCTGTCAGAACATTTCCTGGTCGCACGGCGGTTCGCAACGACACCTGCGCGATGGCGGGCGTCAGTCTGAACATGTCAGCTCGGGTGCACCCGGTCATCTGGTCCACCTCAGGTCTGCCCTTCGACTGTCTCCAAGCCGTGCCCGTACCGAAACCACTAGGTGGCTGTTTGATAATGGCCGTCAACTCATTGATATATTTAAATCAATCGGTTCCACCTTACGGCGTCTCACTGAACAGTGTTGCCACACACACCACAAATTTTCCCCTGAGGATCCAGGAGGGCGTGTGCATGACGCTGGAGGGCGCGTGCGTGGCGCGGCTGTCGGACGCCGTGTTCGCGGTGTCTCTGCGCGGCGGCCAGCTGTACGTTGTGGCGCTGCTGGCGGACAGTGTGCGCTCCGTCAGAAGCTTCCACATCGACCGCGCCGCCGCCTCCGTGCTCACCACCTGCATGTGCGTTATAGAAGAGGACTTCCTTTTCCTGGGGTCGCGGCTCGGAAACTCGCTGCTGCTGCGAGTTACCGAGCGAGAGAACCGGATGCTGTTCTCCGTTGACAAGCCCCTGGAAGCGACGGTCGATCTGACCGTGGCCGAAACCGAACGAGAGCAGAGCAGAGAGAAGGAGCAGCCCGACCCGGCCTCGAAGCGGCGGCGCATGGACACCATCAGCGACTGCGTGGCCTCCAACGTCATCGAGATCAGCGACGGAGACGAGCTCGAGGTGTACGGCAGCGACATACGCACCTCCACAAGACTCACCAGCTACGTGTTCGAGGTATGCGATTCGCTGTTAAACATATGTCCGATCGGCGACGTGTCTATGGGAGAGCCCCAGCTCCTCTCCGAGGAGTACAGCAGGCAGCAGGAGAATCCTCTGGTAGAACTGGTGACCTGTAGTGGCAGGGGGAAGAACGGCGCCCTGACCGTGCTGCAGAGGACGGTCAGACCTCAGCTGATTACTGCTTTCAATTTACCCGGCTGTATCGACATGTGGTCGGTTTTCGGAGAGAGCGAAAGCACCAGAGAAAACGAAGGGACGCACGCGTATTTGATACTGACGCAGGACGACTCCTCCATGGTTCTGCAAACTGGCCAAGAGATCAACGAGGTGGACAACTCTGGCTTCATGACGGGTTCGCCCACCATCTTCGCCGGAAACCTCGGGAATAACAAATTCATGGTGCAGGTCACCACCACCACCATTCGACTCATCAAGGGCGGCGTGCAGCTGCAGTCGATCCAGCTGGAGTGGACGGCGCAGTACGCGGCCGTCGCGGACCCCTACCTGTGCGTCACGTCCAGCTGCGGCCGCGCCATCGTGCTGGCCCTGAGAGAGATCAGGGGGAAGGACGGGCAGCCGTCGGGTCGGCTGGCGCCCACGCGGCAGTGCGTCCCCGCGCGGCCCCCGCTCGTGCGCGCCGCCCCGCACCGCGACCTCAGCGGACTGTTCGCGCCAGACCTCGCCGAGCCCGGCCACCAGGTCAAAGGTGAGTTCACCGGTAAGCTGAAGGAGAACGTGAAGAAGGAGGCCTTCAAGCCCGGCGTGGTCTATGAGCTGAACGACGAAGACGAGATGCTGTACGGAGGCGACCAGACACCTGCATCCATGGCCAGCATAATGCTGGCGGAGCAAAGCAAGAATCCAGGGGTTCCGCGTCGGATGTCGCGCTGGTGGAAGAAGTACCTGCAGGAGGTGAAGCCCACGTACTGGCTGTTCTGCGTTCGCGACAACGGCAACCTGGAGATATACTCGTTGCCGGAAATGAGGTTGAGTTTCCTGGTGAGAGACTCGTGCGCTGGAAACAGGATATTGGCGGACAGCCTGGAGTCCGTCCCGATGTCAGACAGCATGGAGGACGAGGACATCAGCGCGCCGTCACACAACGCTGATGCTGAGAAGCTCAAGGAACTGTGCGTCGTCGGTCTGGGGCACAAGGGTTCCAGGGTGATACTGATGCTGAGGATGCAAAATGAATTGATGATTTATCAGGCGTACAAATACCCCCGGGGGAATCTCAAGCTGCGGTTCTGCCGGGTGACTGTCTCGTTCCCGTTTGGGTACGAGAGCGTGCCCAGCACCGCACAGAGCGCCGACACCTACGAGACGGCCGGCGTGCGGGACGGGGTGCGGCAGCTGCGGTACTTTGGCAACGTGGGCGGGTACAGCGGCGTGTTCGTCTGCGGCGCGACCCCCTACATGATGTTCTTGTCTGCGCGCGGCGAGCTGCGCCTGCACCCGCTGCACGCCGACCGACCGCCCGTGCACACGTTCGCGCCCTTCAACAACACCAATTGTCCGCAGGGCTTCCTGTACTTTAACGCCGAGTCGTCGCTCCGCATCTGCGCGCTGCCGTCGCACCTGTCGTACGACGCGGCGTGGGCGGTGCGCAAGGTGCCCATCCGCATGACGCCGCACTACGTCACGTTCCACCTGGAGTCCAGGACCTACTGCCTCGTGGCCTCCACCTCGCAGCCCACCACGGTCTACTACAAGTTCAACGGCGAGGACAAGGAGAAGTCTGCCGAGAACAAAGGGGACAGGTTCCCGTACCCGATGCTGGATCGCTTCTCGGTGATGCTGTTCTCCCCCGTCTCCTGGGAGATCATACCGAACACCAAGATCGAGCTGGACGAGTGGGAGCACGTGACGTGTCTCAAGAACGTGTCGCTGTCGTACGAAGGAACCAGATCCGGTCTCCGCGGTTACATAGCGATAGGAACTAATTATAATTACAGCGAGGATATCACTTCTAGGGGGCGGATAATAATCTACGACATAATCGACGTGGTCCCGGAGCCCGGGCAGCCGCTGACCAAGAACCGGTTCAAGGAGATCTACTCCAAGGAGCAGAAGGGTCCGGTGACCGCGCTCACGCAGGTGCTCGGCTACCTCATATCCGCCGTCGGACAGAAGATATACATATGGCAGCTGAAGGACAACGACCTAGTGGGCGTCGCGTTCATCGACACCCAGATATACGTGCACCGCATGCTGGCCGTCAAGAACCTCATCCTGGTGGCCGACGTCTACAAGTCCATCTCGCTGCTGCGCTACCAGCCCGCGCACAGGACGCTCTCGCTGGTCTCCAGGGACTTCAGGACCGCGCAGATATACGATATGGAGTTCATGGTGGATAATACGAATCTCGGTTTCCTGGTCAGCGAAGCCGAGGGGAACTTCGCGCTGTTCATGTACCAGCCGCAGGCCAGGGAGAGCTACGGAGGCCAGCGGCTGATACGCAAGAGCGACTACCACCTGGGCCAGCAGGTGCACGCCATGTTCCGCATCAACGTGCGCTCGCTGCCAGACTCCGACAACTCGCACAAGCGACACGTCAGCATGTTCACGACCCTGGACGGCGCCATAGGCTACGTGCTGCCGGTCACGGAGAAGATGTACCGGCGCCTACTGATGTTGCAGAACGTCATGAACAACTACTACTGCCACATAGCCGGCCTCAACCCGAGGGCCTTTCGCACGTACAAGGCGTCGCGGCGCGCGGCGGGGGGCGGGGCGGCGCGGGGCGTGCTGGACGGGGACCTGGTGGCGCTGTACGCCGCCATGCCGCGCGCCGACCAGCACGACATCGCAAAGAAAATCGGTACAAAAGTCGAGGAGATAATGTCGGACTTGTACGAGATAGACAGACTGACCGCGCATTTTTAG

Protein

MFSICRTTHPATGIEHAVSCYFFNNDEVCLVTAGANIIKVFRLLPEGHTKEINAAGQPIPPKMKLECLATYTLWGNVMSLASVRCQSSGRDILLVSFKEAKLSVLQYDPQTNNLVTLSMHYFEEDDMKGGWTTHPHIPWIRVDPEFRCAVMLLYGKKLAVLPFRKDITSEEGDPLEAKPLSDTKKNQAAHTMNRAPTLASYIIILKDLDEKIDNILDIQFLHGYYEPTLLLLYEPVRTFPGRTAVRNDTCAMAGVSLNMSARVHPVIWSTSGLPFDCLQAVPVPKPLGGCLIMAVNSLIYLNQSVPPYGVSLNSVATHTTNFPLRIQEGVCMTLEGACVARLSDAVFAVSLRGGQLYVVALLADSVRSVRSFHIDRAAASVLTTCMCVIEEDFLFLGSRLGNSLLLRVTERENRMLFSVDKPLEATVDLTVAETEREQSREKEQPDPASKRRRMDTISDCVASNVIEISDGDELEVYGSDIRTSTRLTSYVFEVCDSLLNICPIGDVSMGEPQLLSEEYSRQQENPLVELVTCSGRGKNGALTVLQRTVRPQLITAFNLPGCIDMWSVFGESESTRENEGTHAYLILTQDDSSMVLQTGQEINEVDNSGFMTGSPTIFAGNLGNNKFMVQVTTTTIRLIKGGVQLQSIQLEWTAQYAAVADPYLCVTSSCGRAIVLALREIRGKDGQPSGRLAPTRQCVPARPPLVRAAPHRDLSGLFAPDLAEPGHQVKGEFTGKLKENVKKEAFKPGVVYELNDEDEMLYGGDQTPASMASIMLAEQSKNPGVPRRMSRWWKKYLQEVKPTYWLFCVRDNGNLEIYSLPEMRLSFLVRDSCAGNRILADSLESVPMSDSMEDEDISAPSHNADAEKLKELCVVGLGHKGSRVILMLRMQNELMIYQAYKYPRGNLKLRFCRVTVSFPFGYESVPSTAQSADTYETAGVRDGVRQLRYFGNVGGYSGVFVCGATPYMMFLSARGELRLHPLHADRPPVHTFAPFNNTNCPQGFLYFNAESSLRICALPSHLSYDAAWAVRKVPIRMTPHYVTFHLESRTYCLVASTSQPTTVYYKFNGEDKEKSAENKGDRFPYPMLDRFSVMLFSPVSWEIIPNTKIELDEWEHVTCLKNVSLSYEGTRSGLRGYIAIGTNYNYSEDITSRGRIIIYDIIDVVPEPGQPLTKNRFKEIYSKEQKGPVTALTQVLGYLISAVGQKIYIWQLKDNDLVGVAFIDTQIYVHRMLAVKNLILVADVYKSISLLRYQPAHRTLSLVSRDFRTAQIYDMEFMVDNTNLGFLVSEAEGNFALFMYQPQARESYGGQRLIRKSDYHLGQQVHAMFRINVRSLPDSDNSHKRHVSMFTTLDGAIGYVLPVTEKMYRRLLMLQNVMNNYYCHIAGLNPRAFRTYKASRRAAGGGAARGVLDGDLVALYAAMPRADQHDIAKKIGTKVEEIMSDLYEIDRLTAHF

Description

Component of the cleavage and polyadenylation specificity factor (CPSF) complex that plays a key role in pre-mRNA 3'-end formation, recognizing the AAUAAA signal sequence and interacting with poly(A) polymerase and other factors to bring about cleavage and poly(A) addition. This subunit is involved in the RNA recognition step of the polyadenylation reaction (By similarity).

Subunit

Component of the cleavage and polyadenylation specificity factor (CPSF) complex, composed of at least Clp, Cpsf73, Cpsf100 and Cpsf160.
Component of the cleavage and polyadenylation specificity factor (CPSF) complex, composed of CPSF1, CPSF2, CPSF3, CPSF4 and FIP1L1. Found in a complex with CPSF1, FIP1L1 and PAPOLA. Interacts with FIP1L1 and SRRM1. Interacts with TUT1; the interaction is direct and mediates the recruitment of the CPSF complex on the 3'UTR of selected pre-mRNAs (By similarity). Interacts with TENT2/GLD2.
Component of the cleavage and polyadenylation specificity factor (CPSF) complex, composed of CPSF1, CPSF2, CPSF3, CPSF4 and FIP1L1. Found in a complex with CPSF1, FIP1L1 and PAPOLA. Interacts with FIP1L1, TENT2/GLD2 and SRRM1. Interacts with TUT1; the interaction is direct and mediates the recruitment of the CPSF complex on the 3'UTR of selected pre-mRNAs (By similarity).

Similarity

Belongs to the CPSF1 family.

Keywords

Alternative splicing Complete proteome mRNA processing Nucleus Reference proteome RNA-binding Phosphoprotein Direct protein sequencing

Feature

chain Cleavage and polyadenylation specificity factor subunit 1
splice variant In isoform B.

Uniprot

H9JWC8 A0A2A4JWZ2 A0A067QMH4 A0A2J7PFU6 A0A2J7PFU9 A0A310SM89 + More
A0A2A3EAC1 A0A087ZX72 E1ZVR7 A0A158NZY8 A0A3L8DWZ0 K7ITG7 A0A1W4XRH5 D6WFP3 A0A1B6KC09 A0A1B6G369 A0A1Y1L5P4 F4X3Z7 E0VY56 A0A195CQR4 N6TMU2 E9ISL3 A0A195F296 T1HLS2 A0A146M172 A0A154PDP7 A0A232F4C9 A0A151X3V9 A0A151J0U4 A0A224X582 A0A1Q3FWQ1 A0A182Y710 A0A182W1M8 A0A084VHX0 A0A182RLI6 A0A182GK16 Q17N25 A0A182KCV3 Q7QHS8 A0A182INZ6 A0A182LH94 A0A182LV33 A0A1S4H6C5 A0A182P5P9 W5JVI9 A0A182FBZ4 T1J479 A0A182V794 A0A2M4A931 A0A0J7L9D9 A0A182HY45 A0A034VF18 A0A0K8VQE0 E2C9X3 A0A0A1XA51 A0A182WXH0 A0A195BLJ1 A0A1A9W3R0 A0A1I8NUG9 A0A1A9V1N0 A0A1W4U6G1 A0A1J1HKM0 B3ME15 Q291E2 B4GAU6 B4LJU3 A0A0M4E4M5 A0A3B0J601 B4P767 B3NR35 B4KT60 A0A0J9RCL1 B4HRD9 Q9V726 B4NN81 A0A1A9Z1W2 A0A0P4VRN3 A0A131Z3B1 B4QFU9 A0A224YUK0 B4JW88 A0A1B0F9F7 A0A0P6J4F5 A0A0Q9WW52 Q9V726-2 A0A2P2I273 A0A091DK29 A0A1W4XTH9 G5C5S6 H0WG63 A0A1W4Y3B8 A0A1U7QU45 A0A250Y7S1 B5DEL2 A0A0F7ZBG5 Q9EPU4 W5U6H6 A0A0D9R822 Q10569 A0A2J8RHR5

Pubmed

19121390 24845553 20798317 21347285 30249741 20075255 + More
18362917 19820115 28004739 21719571 20566863 23537049 21282665 26823975 28648823 25244985 24438588 26483478 17510324 12364791 20966253 20920257 23761445 25348373 25830018 17994087 15632085 17550304 22936249 9604891 10731132 12537572 12537569 19450530 26830274 28797301 21993625 28087693 15489334 15057822 22673903 11369601 17927953 21183079 23127152 7651824 1756731

EMBL

BABH01029195 BABH01029196 NWSH01000450 PCG76329.1 KK853149 KDR10643.1 + More
NEVH01025648 PNF15214.1 PNF15210.1 KQ761323 OAD57895.1 KZ288309 PBC28675.1 GL434618 EFN74734.1 ADTU01005136 QOIP01000003 RLU24961.1 AAZX01006832 KQ971319 EFA00240.2 GEBQ01030988 JAT08989.1 GECZ01012880 JAS56889.1 GEZM01066160 JAV68121.1 GL888624 EGI58789.1 DS235843 EEB18312.1 KQ977394 KYN02985.1 APGK01017648 APGK01017649 KB740047 KB631866 ENN81834.1 ERL86808.1 GL765434 EFZ16427.1 KQ981856 KYN34588.1 ACPB03006649 GDHC01005061 JAQ13568.1 KQ434879 KZC09982.1 NNAY01000983 OXU25621.1 KQ982557 KYQ55105.1 KQ980624 KYN15033.1 GFTR01008780 JAW07646.1 GFDL01003149 JAV31896.1 ATLV01013242 KE524847 KFB37564.1 JXUM01069058 JXUM01069059 KQ562533 KXJ75685.1 CH477202 EAT48120.1 AAAB01008816 EAA05261.4 AXCM01009566 ADMH02000205 ETN67373.1 JH431841 GGFK01003976 MBW37297.1 LBMM01000214 KMR04458.1 APCN01004490 GAKP01018577 JAC40375.1 GDHF01011246 JAI41068.1 GL453904 EFN75271.1 GBXI01006305 JAD07987.1 KQ976440 KYM86555.1 CVRI01000002 CRK86785.1 CH902619 EDV37560.1 CM000071 EAL25170.2 CH479181 EDW32048.1 CH940648 EDW60602.2 CP012524 ALC41041.1 OUUW01000001 SPP75313.1 CM000158 EDW91032.1 CH954179 EDV56024.1 CH933808 EDW09580.2 CM002911 KMY93778.1 CH480816 EDW47868.1 AF241364 AF241365 AF241366 AE013599 AY051896 CH964282 EDW85820.1 GDRN01103447 JAI58086.1 GEDV01003275 JAP85282.1 CM000362 EDX07094.1 GFPF01006807 MAA17953.1 CH916375 EDV98226.1 CCAG010002095 GEBF01006266 JAN97366.1 KRG00299.1 IACF01002475 LAB68128.1 KN122397 KFO30625.1 JH173457 EHB16887.1 AAQR03179256 AAQR03179257 AAQR03179258 GFFV01000319 JAV39626.1 AC139605 BC168713 AAI68713.1 GBEX01000729 JAI13831.1 AF322193 BC056388 JT406405 AHH37581.1 AQIB01115377 AQIB01115378 X83097 NDHI03003691 PNJ08062.1 PNJ08063.1

Proteomes

UP000005204 UP000218220 UP000027135 UP000235965 UP000242457 UP000005203 + More
UP000000311 UP000005205 UP000279307 UP000002358 UP000192223 UP000007266 UP000007755 UP000009046 UP000078542 UP000019118 UP000030742 UP000078541 UP000015103 UP000076502 UP000215335 UP000075809 UP000078492 UP000076408 UP000075920 UP000030765 UP000075900 UP000069940 UP000249989 UP000008820 UP000075881 UP000007062 UP000075880 UP000075882 UP000075883 UP000075885 UP000000673 UP000069272 UP000075903 UP000036403 UP000075840 UP000008237 UP000076407 UP000078540 UP000091820 UP000095300 UP000078200 UP000192221 UP000183832 UP000007801 UP000001819 UP000008744 UP000008792 UP000092553 UP000268350 UP000002282 UP000008711 UP000009192 UP000001292 UP000000803 UP000007798 UP000092445 UP000000304 UP000001070 UP000092444 UP000028990 UP000192224 UP000006813 UP000005225 UP000189706 UP000002494 UP000000589 UP000029965 UP000009136

PRIDE

H9JWC8 Q9V726 Q9EPU4 Q10569

Pfam

PF03178 CPSF_A + More
PF13649 Methyltransf_25

Interpro

IPR015943   WD40/YVTN_repeat-like_dom_sf        + More
IPR004871   Cleavage/polyA-sp_fac_asu_C
IPR002048   EF_hand_dom
IPR011992   EF-hand-dom_pair
IPR029063   SAM-dependent_MTases
IPR041698   Methyltransf_25
IPR036322   WD40_repeat_dom_sf

SUPFAM

SSF47473   SSF47473        + More
SSF53335   SSF53335
SSF50978   SSF50978

Gene 3D

2.130.10.10

CDD

cd00051 EFh

ProteinModelPortal

H9JWC8 A0A2A4JWZ2 A0A067QMH4 A0A2J7PFU6 A0A2J7PFU9 A0A310SM89 + More
A0A2A3EAC1 A0A087ZX72 E1ZVR7 A0A158NZY8 A0A3L8DWZ0 K7ITG7 A0A1W4XRH5 D6WFP3 A0A1B6KC09 A0A1B6G369 A0A1Y1L5P4 F4X3Z7 E0VY56 A0A195CQR4 N6TMU2 E9ISL3 A0A195F296 T1HLS2 A0A146M172 A0A154PDP7 A0A232F4C9 A0A151X3V9 A0A151J0U4 A0A224X582 A0A1Q3FWQ1 A0A182Y710 A0A182W1M8 A0A084VHX0 A0A182RLI6 A0A182GK16 Q17N25 A0A182KCV3 Q7QHS8 A0A182INZ6 A0A182LH94 A0A182LV33 A0A1S4H6C5 A0A182P5P9 W5JVI9 A0A182FBZ4 T1J479 A0A182V794 A0A2M4A931 A0A0J7L9D9 A0A182HY45 A0A034VF18 A0A0K8VQE0 E2C9X3 A0A0A1XA51 A0A182WXH0 A0A195BLJ1 A0A1A9W3R0 A0A1I8NUG9 A0A1A9V1N0 A0A1W4U6G1 A0A1J1HKM0 B3ME15 Q291E2 B4GAU6 B4LJU3 A0A0M4E4M5 A0A3B0J601 B4P767 B3NR35 B4KT60 A0A0J9RCL1 B4HRD9 Q9V726 B4NN81 A0A1A9Z1W2 A0A0P4VRN3 A0A131Z3B1 B4QFU9 A0A224YUK0 B4JW88 A0A1B0F9F7 A0A0P6J4F5 A0A0Q9WW52 Q9V726-2 A0A2P2I273 A0A091DK29 A0A1W4XTH9 G5C5S6 H0WG63 A0A1W4Y3B8 A0A1U7QU45 A0A250Y7S1 B5DEL2 A0A0F7ZBG5 Q9EPU4 W5U6H6 A0A0D9R822 Q10569 A0A2J8RHR5

PDB

6FUW E-value=0, Score=3162

KEGG

101745127 K14401 cleavage and polyadenylation specificity factor subunit 1 | (RefSeq) cleavage and polyadenyla

PATHWAY

03015 mRNA surveillance pathway - Bombyx mori (domestic silkworm)

GO

GO:0005634 GO:0003676 GO:0005509 GO:0006378 GO:0005847 GO:0017022 GO:0010508 GO:0098789 GO:0003730 GO:0019899 GO:0035925 GO:0005654 GO:0003723 GO:0046872 GO:0033557 GO:0005839 GO:0051603 GO:0046835 GO:0006281 GO:0006259 GO:0005515

Subcellular location

Nucleus

Length:

1456

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.347160000000001

Exp number, first 60 AAs:

0.03345

Total prob of N-in:

0.00238

outside

1 - 1456

Pi

321.567235

Theta

182.022243

Tajima's D

2.998455

CLR

0.146645

CSRT

0.978651067446628

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics