SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO16394
Pre Gene Modal
BGIBMGA013846
Annotation
PREDICTED:_uncharacterized_protein_LOC106131926_[Amyelois_transitella]
Location in the cell
Cytoplasmic   Reliability : 2.196
 

Sequence

CDS
ATGAATTTTAAAATAATCGTGACGTGGCTCGTTGTTTTTCAAGCGAACGAAATCAGCTGCGACTGTGACAGTTATGTTGAATGTCTTAGTGGTTTCTTCGAGGACTTCTTCTTTGGAGACCCAGAGGAGACGGAAGTGAGAGCGCAAACGTTTAGAACTAACAATACGGAAATCAAAAATATAAATTTCAGTGATCTAGATGCTGTGCTGAAAGATATAACAGAATTTTTGAGTGAAGAAGTTCAAAGTCAGCCGCAGAATGAATCAGATGACGTTTTCAAAACAGTCAAAGCCGAAACGAAAATTTACATTAAGGCATTCGATTTTGGTGCCAACGGTGAAAACGCTGATGGAGCCGAAAGAAAGAATGAAAACTTCGAAGTTGTATCTAAAATACCTGACCGAAATACTAAAGTCCCTATAAATGATGGAACAGCCATAAATGCAAAGTCGAAGAATAGTGATATTATCGAGAAAGGATCAAAACACGTCGGTCAAAATGAGATATTCAATGATGAGCTTTACATGACATATTATGATGATATAGACGACAATTCTACAGATTATCCGGCTATCGACTACGCCGAAATATACAAAGATGTTACTGTTGAAGAACATGTATACATTCCCACACAAGAGCCTTCTATTGATGACTTCGACGGGAATGCTACAAAAAGTGAAAATGATAATCTCATTGAAAATTCTCCGGATAAGTCACGTTCGAAATCAGACGAGGAAAGCGCTGACTTAAATGTAGTTTCCGCATGGATCGTCACTGTGTTTGTGAAAAATACGACCGCGAATGGCCAGTTCGACTATGTGTGCGACGGAGCTCTGATATCGAACCAACATGTGCTGACCGGTGCAAGATGTACAGTCCACGCAAACGCCACGTTCAAGCCTGATGATGTTATAGTTATCGTCGGGAAGAAGTCTTTGCAAGGGTCTGGCGGGAATGAAAAGGCTGTCAGGGTCACCGAAATACACAGACAGGATAATTTCACAATCGTAAATGGTAAAGTTTTAAATGAGTTAGCGGTGCTCAAACTCGATGAGATTGTCTATGTTAATGACGATGTTCAAATCGCGAATATAAGTACAGGTGAACTTGGCGATTCCGACAAATCTTTAACAACTGCATGGGCCTTTTCGGGTGAACTAAAGTCTGTTTACTTCGAGAAAGTAGAAAATGGATCGTGCGCTGACGGCGACTTAGAGAATGTCTTGTGTGCTACTTATGGAAACGAGGTGGCTCTTTGTCCCAGTTACGGAGGGCTCTACGCTGTCAAGGTTGAGAACGCCTGGTTTCTTCGTGGCATCCGATCAGGAGATCCAGCAGAGAGGGGAATTTGCTTCATCAAACGGATCGATTATACAACCTTGGATAATTATTTGGATTGGATCAACCAATTTTTGGAGAAATAA
Protein
MNFKIIVTWLVVFQANEISCDCDSYVECLSGFFEDFFFGDPEETEVRAQTFRTNNTEIKNINFSDLDAVLKDITEFLSEEVQSQPQNESDDVFKTVKAETKIYIKAFDFGANGENADGAERKNENFEVVSKIPDRNTKVPINDGTAINAKSKNSDIIEKGSKHVGQNEIFNDELYMTYYDDIDDNSTDYPAIDYAEIYKDVTVEEHVYIPTQEPSIDDFDGNATKSENDNLIENSPDKSRSKSDEESADLNVVSAWIVTVFVKNTTANGQFDYVCDGALISNQHVLTGARCTVHANATFKPDDVIVIVGKKSLQGSGGNEKAVRVTEIHRQDNFTIVNGKVLNELAVLKLDEIVYVNDDVQIANISTGELGDSDKSLTTAWAFSGELKSVYFEKVENGSCADGDLENVLCATYGNEVALCPSYGGLYAVKVENAWFLRGIRSGDPAERGICFIKRIDYTTLDNYLDWINQFLEK

Summary

Similarity
Belongs to the peptidase S1 family.
Pfam
PF00089   Trypsin
Interpro
IPR001254   Trypsin_dom        + More
IPR009003   Peptidase_S1_PA       
IPR018114   TRYPSIN_HIS       
IPR001314   Peptidase_S1A       
SUPFAM
SSF50494   SSF50494       
PDB
1PYT     E-value=8.73962e-10,     Score=153

Ontologies

Topology

SignalP
Position:   1 - 20,         Likelihood:  0.937516
 
 
Length:
474
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00325
Exp number, first 60 AAs:
0.00154
Total prob of N-in:
0.00269
outside
1  -  474
 
 

Population Genetic Test Statistics

Pi
224.289965
Theta
183.332206
Tajima's D
1.689872
CLR
11.610114
CSRT
0.826608669566522
Interpretation
Uncertain
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