Gene

KWMTBOMO16389

Pre Gene Modal

BGIBMGA013736

Annotation

PREDICTED:_uncharacterized_protein_LOC106142604_[Amyelois_transitella]

Location

Bomo_Chr28(-):8021923-8025042      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 4.591

CDS

ATGGCAGAAAGAATGCTATTCTTGGAAAAGTTGAAAAAAGCGGCCAGTAAAAATAAAGAAAATGAGGATCAACATGATTTAACGAATAGTGAACAAGAAGTAGAAAGTAATTTACAAATAGAAGCTGAACCAAAAACTATCGAATTGACCAATATTAATGATGAAAGTGAAGAAGATAAGGAAGAAAAAGATTTTTCATCAGATGATAGTATCGCAGATCCTCATTATCAGATTGAAAAGAATGATTTATCGTCAGATTCGGATGAAACAGTAGAACAGAATGAAGAAGAAAATATTTCACGTGAATCAAACCAAAACATTACACGAAGGAGGAAAGGACAGCCAGCACTTTGGAAAACGAATGTAGCAAAGCGTCTACGAAATGCAGGGAAAGAATATGTAGGCAAAAATAACAAAGTTATGCGAGAAAGACGATTAGGACCAGGCTGTACAGAAAAGTGCAAGTTAAAGTGTAACACAAGGTTTGATGATGAGACTCGACGCCATATTTTTGATGCATATTATAAATTACCGGATCTGCAAAGTAAAAGAACTTTTGTAGCATTCAATATGTCCTCTATTGTACCTACGTATCAATATAAAAAAGGAACACGTCGAAATAACAACGCATTTTATTTCAATGATAAAGATGGCGAAAAAATTCGCGTTTGTAAGAGTTTTTTTATGTCTACGCTGGATGTATCTGACAGATTTATTCGAACGGTTACAGAAAAATCAAGAAGTGATGTTTCAGGTATTATACTGGAGGATCAGAGAGGGAAACATGGTAATCACAGCCATGTAAATAATAATGTCAAAGATAATTTGAGAAATTTTATTAAGGCGATACCAAAAATAGAAAGCCATTACTGTCGAGCAGATACGCGAAAAGAATATATTGATGGAAGTAAGACTATTGCAGATATTTATAGAGATTATGTGAAACAATGTGAAGAGAAAAGAGAAACAAGTGCTAATTATATCATGTTTAATAGAATATTTAATGGAGAATTTAATATAGCATTTTACCAACCTAAGAAGGATCAGTGTGAGGACTGTGTTGCCTATAATAACGCAACTGGAGAAGATAAAAACCGACTGAAGCCGAAATATGAAAACCATCTAAAAGAAAAAGAGCTATCAAGAATAGAGAAGGCAAAAGACAAGTCAGACGCAGAAGATAAAGAATCAACTATAGTAGCGGTTTATGACTTACAGGCTGTGATGCCATGTCCTAGGGGAGATGTGTCAAATTTCTACTATGTTTCAAAGGTAAATACCTTAAACTTTACAATCTATGACATGAATAATAAAAATGCGCTCTGCTACGTGTGGCATGAAGGAGAAGCAAACAGAGGAGCTATAGAAATAGGGACCTGTGTTTTAGAATATTTAAAAAATCTTGGCAGGGATTTAACAACTGAAGCGAAACTAGATATTATTTTTTATTCTGACAACTGCTGCGGACAGCAAAAGAATAAGTTTATTATTAGTCTGTACATGTACGCTGTTTCTACTTTTGATTATATCAATAGTATCACGCATAAATTTCTAATAAAAGGTCACACGCAAAACGAAGGTGACAGTGTGCATTCTGTCATTGAAAAAAACATTAAAAAGACTTTGAAATCTGGGCCTATCTATACACCCGATCAGTACATTTCTATAATTCGCACTGCAAAAAAGAAAGGATCTCCTTACAAAGTCATAGAAATGAATCATACAAATTTTTACGATTTAAAATCGCTAGCCTCTGATGTGGGAAGAAATTTTAATAAAAATACTGATAATGAGACTGTGAAGATGACAGATATAAAGATTCTGAAAGTAGATGCTGACCACAAAGGGTTCTTTTTGTATAAAACTTCTTACGGTGAAAATGAATTTAAATTTGTGAAAGTTATTAGCCGAGCATCAAAATCTTTGTACGGAAATTACAGATTGCAATCTGCTTATAAAAAAAGTAACGGAATTTCAGAAAATAAGAAGAGAGGACTACTAGATTTGGTTAACAAAAATATAATTCCAAACTATTATCGACAATTTTACGAAGGGTTATAA

Protein

MAERMLFLEKLKKAASKNKENEDQHDLTNSEQEVESNLQIEAEPKTIELTNINDESEEDKEEKDFSSDDSIADPHYQIEKNDLSSDSDETVEQNEEENISRESNQNITRRRKGQPALWKTNVAKRLRNAGKEYVGKNNKVMRERRLGPGCTEKCKLKCNTRFDDETRRHIFDAYYKLPDLQSKRTFVAFNMSSIVPTYQYKKGTRRNNNAFYFNDKDGEKIRVCKSFFMSTLDVSDRFIRTVTEKSRSDVSGIILEDQRGKHGNHSHVNNNVKDNLRNFIKAIPKIESHYCRADTRKEYIDGSKTIADIYRDYVKQCEEKRETSANYIMFNRIFNGEFNIAFYQPKKDQCEDCVAYNNATGEDKNRLKPKYENHLKEKELSRIEKAKDKSDAEDKESTIVAVYDLQAVMPCPRGDVSNFYYVSKVNTLNFTIYDMNNKNALCYVWHEGEANRGAIEIGTCVLEYLKNLGRDLTTEAKLDIIFYSDNCCGQQKNKFIISLYMYAVSTFDYINSITHKFLIKGHTQNEGDSVHSVIEKNIKKTLKSGPIYTPDQYISIIRTAKKKGSPYKVIEMNHTNFYDLKSLASDVGRNFNKNTDNETVKMTDIKILKVDADHKGFFLYKTSYGENEFKFVKVISRASKSLYGNYRLQSAYKKSNGISENKKRGLLDLVNKNIIPNYYRQFYEGL

Uniprot

H9JW23   A0A2H1WUL7   J9LMT7   J9KBE8   A0A026WEZ7   T1HH44   + More
J9KD89   A0A3S2M8H5   A0A0A9VZA8   A0A3S2LBW7   A0A2W1C4W6   A0A2S2NW59   A0A2H1X0U8   A0A0A1XB56   J9LH36   J9LBW7   H9JF09   J9LN28   J9M4G9   J9LYS5   A0A2R7WJY1   X1WUB1   W4ZD48   J9KUZ7   A0A3S2N704   W4XW95   X1XRK2   J9L9L9   A0A3S2P4C8   W4YFK8   V4ACF2   J9LAK0   J9KUZ8   A0A2H1VXX2   J9KRP2   R7USQ6   A0A1Y1MM80   A0A336L7N8   A0A1Y1N893   A0A3S2TF04   J9KF07   J9KUE4   J9M3G1   A0A3N0YTD4   W4XFL6   X1X3M6   J9LY49   J9M2W1   A0A2S2P112   A0A2S2NVW0   X1X655   S4PHD9   W4XFL7   A0A224X9R1   J9M8J2   V4ABT9   A0A1Y1LHW9   V4A9X1   X1XHP1   X1X811   A0A1B0DBG1   A0A3S1ATS4   A0A1B6ERU6   H9JMR7  

Pubmed

19121390    24508170    25401762    28756777    25830018    23254933    + More
28004739    23622113   

EMBL

BABH01025621    ODYU01011180    SOQ56761.1    ABLF02010195    ABLF02010196    ABLF02055224    + More
ABLF02009832    ABLF02009835    KK107242    EZA54533.1    ACPB03016567    ACPB03016568    ABLF02013766    RSAL01000009    RVE53882.1    GBHO01042097    JAG01507.1    RSAL01000260    RVE43346.1    KZ150145    PZC72904.1    GGMR01008791    MBY21410.1    ODYU01012570    SOQ58975.1    GBXI01005713    JAD08579.1    ABLF02023797    ABLF02019640    ABLF02019643    ABLF02019649    BABH01033861    ABLF02003967    ABLF02022524    ABLF02009837    ABLF02009842    KK854960    PTY19956.1    ABLF02037175    ABLF02037177    AAGJ04019135    AAGJ04019136    AAGJ04019137    ABLF02033230    RSAL01005524    RVE40000.1    AAGJ04159061    ABLF02004032    ABLF02042646    ABLF02004635    RSAL01000569    RVE41377.1    AAGJ04087115    KB200426    ESP01684.1    ABLF02026661    ABLF02026674    ABLF02026675    ABLF02041813    ABLF02060074    ABLF02010095    ODYU01004805    SOQ45064.1    ABLF02013311    AMQN01021160    AMQN01021161    KB298212    ELU09529.1    GEZM01027265    JAV86789.1    UFQS01001897    UFQT01001897    SSX12663.1    SSX32106.1    GEZM01010383    JAV94073.1    RSAL01000210    RVE44232.1    ABLF02020246    ABLF02014818    ABLF02014820    ABLF02006166    ABLF02026282    RJVU01027735    ROL48958.1    AAGJ04162991    ABLF02010023    ABLF02038617    ABLF02012672    GGMR01010491    MBY23110.1    GGMR01008668    MBY21287.1    ABLF02024430    GAIX01003312    JAA89248.1    AAGJ04038612    AAGJ04038613    GFTR01007350    JAW09076.1    ABLF02012895    KB201847    ESO94282.1    GEZM01058056    GEZM01058054    GEZM01058052    GEZM01058051    GEZM01058048    JAV71930.1    KB202199    ESO91835.1    ABLF02018334    ABLF02021172    AJVK01029962    RQTK01001146    RUS71879.1    GECZ01029139    JAS40630.1    BABH01016775   

Proteomes

UP000005204    UP000007819    UP000053097    UP000015103    UP000283053    UP000007110    + More
UP000030746    UP000014760    UP000092462    UP000271974   

PRIDE

H9JW23    H9JF09    H9JMR7   

Pfam

PF04500   FLYWCH        + More
PF10551   MULE
PF04218   CENP-B_N
PF13843   DDE_Tnp_1_7
PF01192   RNA_pol_Rpb6
PF13359   DDE_Tnp_4
PF16064   DUF4806

Interpro

IPR018289   MULE_transposase_dom        + More
IPR007588   Znf_FLYWCH       
IPR012337   RNaseH-like_sf       
IPR009057   Homeobox-like_sf       
IPR007889   HTH_Psq       
IPR036388   WH-like_DNA-bd_sf       
IPR029526   PGBD       
IPR020708   DNA-dir_RNA_polK_14-18kDa_CS       
IPR036161   RPB6/omega-like_sf       
IPR006110   Pol_omega/K/RPB6       
IPR012293   RNAP_RPB6_omega       
IPR027806   HARBI1_dom       
IPR032071   DUF4806       
IPR018247   EF_Hand_1_Ca_BS       

SUPFAM

SSF53098   SSF53098        + More
SSF46689   SSF46689       
SSF63562   SSF63562       

Gene 3D

1.10.10.10     3.90.940.10    

ProteinModelPortal

H9JW23   A0A2H1WUL7   J9LMT7   J9KBE8   A0A026WEZ7   T1HH44   + More
J9KD89   A0A3S2M8H5   A0A0A9VZA8   A0A3S2LBW7   A0A2W1C4W6   A0A2S2NW59   A0A2H1X0U8   A0A0A1XB56   J9LH36   J9LBW7   H9JF09   J9LN28   J9M4G9   J9LYS5   A0A2R7WJY1   X1WUB1   W4ZD48   J9KUZ7   A0A3S2N704   W4XW95   X1XRK2   J9L9L9   A0A3S2P4C8   W4YFK8   V4ACF2   J9LAK0   J9KUZ8   A0A2H1VXX2   J9KRP2   R7USQ6   A0A1Y1MM80   A0A336L7N8   A0A1Y1N893   A0A3S2TF04   J9KF07   J9KUE4   J9M3G1   A0A3N0YTD4   W4XFL6   X1X3M6   J9LY49   J9M2W1   A0A2S2P112   A0A2S2NVW0   X1X655   S4PHD9   W4XFL7   A0A224X9R1   J9M8J2   V4ABT9   A0A1Y1LHW9   V4A9X1   X1XHP1   X1X811   A0A1B0DBG1   A0A3S1ATS4   A0A1B6ERU6   H9JMR7  

KEGG

101739343    K07525 neuronal guanine nucleotide exchange factor | (RefSeq) uncharacterized LOC101739343

GO

GO:0016021   GO:0003677   GO:0006360   GO:0003899   GO:0005666   GO:0005736   GO:0006366   GO:0006383   GO:0005665  

Length:

686

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.02581

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00023

outside

1  -  686

 

 

Pi

1.378872

Theta

4.557019

Tajima's D

-2.341581

CLR

9.727841

CSRT

0.00124993750312484

Interpretation

Uncertain