Gene

KWMTBOMO16388

Annotation

olfactory_receptor_56_[Bombyx_mori]

Location

Bomo_Chr28(-):7954074-7956382      View in EpiBrowser

Full name

Odorant receptor      

Location in the cell

PlasmaMembrane   Reliability : 4.554

CDS

ATGAAGCTCCTGGAGAAGCTAGAGGACCCCGATCGTCCTTTACTAGGACCAAACGTCAAAGCTTTGAAGTTCTGGGGGCTTCTGTTACCGGAAAGCAGATCAAAAAAGTATTTTTACCTATTTATGCATTTCGCTGTGACTGTTTTCACTGCCACTGAATATATAGACGTATGGTTTGTTAAATCAGACCTAGCTTTGTTATTAAACAATCTGAAGATAACAATGTTGGCGACTGTAAGCGTTTTGAAGGTTACCACTTTTTTGTTGTGGCAAAATGCCTGGCGTGACCTCATTGGTTACGTATCTCGAGCTGATTTAGAGCAAAGGGCCACTTCGGACTCGAGAAAGTTGGCTCTGATAAACGGATTTACCGGCTACTGCCGCAAAATAACGTATTATTACTGGTTCTTGATGTATACGACCGTGGCAATTGTTACAGTACAACCAATATTTAAGTTTTTTTCATCAGCTGCCTACAGACTGGACGTCCAATCTGGAAACGGTACATACCTGCAAGTAGTAAGTTCCTGGATACCGTGGGATAAAAACACTTTACCCGGATACCTATTGGCCTCTATTTACCAGACATACGCAGCCATTTATGGTGGAGGCTGGATCACGTCCTTCGACACCAATGCCATAGTTATAATGGTATTTTTTAGAGCTGAATTGGAACTATTGAGGATTGATTGTGCTGCTTTATTTGATGATGAAAAATCTTTCGGTGATATGGCTTTTATGAGGAGATTGAAAGAGTGTCATAGAAGACATACAGAACTTGTTAAGTGA

Protein

MKLLEKLEDPDRPLLGPNVKALKFWGLLLPESRSKKYFYLFMHFAVTVFTATEYIDVWFVKSDLALLLNNLKITMLATVSVLKVTTFLLWQNAWRDLIGYVSRADLEQRATSDSRKLALINGFTGYCRKITYYYWFLMYTTVAIVTVQPIFKFFSSAAYRLDVQSGNGTYLQVVSSWIPWDKNTLPGYLLASIYQTYAAIYGGGWITSFDTNAIVIMVFFRAELELLRIDCAALFDDEKSFGDMAFMRRLKECHRRHTELVK

Similarity

Belongs to the insect chemoreceptor superfamily. Heteromeric odorant receptor channel (TC 1.A.69) family.

Uniprot

C4B7Y4   A0A075T7Z4   A0A0E4B3V1   A0A2L1TG61   A0A2K8GKU3   A0A0P1IVM5   + More
A0A1B3B748   A0A076E7L9   A0A0S1TPT8   A0A1B3P5P2   A0A3G6V6U8   A0A2H1WJJ5   A0A345BEW9   A0A1X9PB04   A0A0L7LII6   A0A076EDE7   A0A0L7LHW9   A0A223HD25   A0A0B5GPZ4   A0A0K8TUA5   A0A223HD66   A0A0V0J105   A0A097IYJ1   A0A0N1IQ17   A0A223HDF8   A0A0B5CUN7   A0A345BET9   A0A3Q8HEA2   A0A212FLU3   A0A212FLU2   A0A0N1PHF6   A0A2K5B187   A0A3G6V734   A0A1S5XXQ3   A0A075TD69   A0A2H1WWR9   A0A2K8GKW0   A0A1B2G2M1   A0A2L1TG50   A0A2A4IZ79   A0A2K8GKV8   A0A194PZB7   A7E3G9   A0A1S5XXN4   A0A0B5GI82   A0A1B3B777   A0A223HDD9   A0A0B5CMZ5   A0A223HDE1   A0A097ITU2   H9JL95   A0A223HD11   A0A0P1J4K6   A0A194RLU9   A0A1S5XXN6   A0A0V0J152   A0A212FK07   A0A0L7L3G4   A0A386H9I1   C4B7V8   A0A1B3P5T6   A0A2H1V744   A0A345BEV3   A0A223HD09   A0A1B3B784   A0A0K8TUU9   A0A0E4FIB5   H9A5P5   A0A345BEV5   A7E3H0   A0A223HD67   A0A2L1TG52   A0A097IYK8   C4B7W0   A0A1B3P5P8   A0A0S1TKZ3   A0A223HD55   A0A1V1WC62   A0A097IYJ6   A0A097ITT3   A0A345BEU4   H9A5P6   A0A076E9B8   A0A0E4B5A3   A0A0B5GQ06   A0A223HD07   A0A0B5GPZ8   A0A075T6X4   A0A0K8TUT9   A0A2L1TG81   A0A0K8TU74   A0A1Y9TK86   A0A0L7L9K8   A0A2K8GL40   A0A097IYL5   A0A1B3B787   A0A223HD50  

Pubmed

19427209    25027790    28736530    24998398    26812239    27538507    + More
30465940    29727827    26227816    28150741    26017144    27006164    25252791    26354079    22118469    23950722    17257213    19121390    22363688    28756777    29375398   

EMBL

AB472133    BAH66350.1    KF768693    AIG51887.1    LC002707    BAR43455.1    + More
KY707211    AVF19653.1    KX585360    ARO70253.1    LN885122    CUQ99411.1    KT588106    AOE48016.1    KF487689    AII01087.1    KR935748    ALM26240.1    KX655986    AOG12935.1    MH193979    AZB49425.1    ODYU01009086    SOQ53253.1    MG816608    AXF48793.1    KX084464    ARO76419.1    JTDY01001040    KOB75046.1    KF487667    AII01065.1    KOB75047.1    KY283616    AST36275.1    KM892367    AJF23782.1    GCVX01000168    JAI18062.1    KY283668    AST36327.1    GDKB01000054    JAP38442.1    KM655529    AIT71979.1    KQ459900    KPJ19350.1    KY283744    AST36403.1    KM678294    AJE25867.1    MG816578    AXF48763.1    MF625629    AXY83456.1    AGBW02007720    OWR54670.1    OWR54669.1    KPJ19351.1    KY081677    ASA39923.1    MH193995    AZB49441.1    KY399297    AQQ73528.1    KF768692    AIG51886.1    ODYU01011636    SOQ57508.1    KX585359    ARO70252.1    KU598895    ANZ03141.1    KY707212    AVF19654.1    NWSH01004938    PCG64574.1    KX585361    ARO70254.1    KQ459586    KPI98084.1    BK005934    DAA05984.1    KY399276    AQQ73507.1    KM892381    AJF23796.1    KT588136    AOE48046.1    KY283733    AST36392.1    KM678307    AJE25880.1    KY283735    AST36394.1    KM597208    AIT69885.1    BABH01011859    KY283605    AST36264.1    LN885112    CUQ99401.1    KQ459995    KPJ18522.1    KY399278    AQQ73509.1    GDKB01000047    JAP38449.1    AGBW02008175    OWR54056.1    JTDY01003257    KOB69861.1    MG546618    AYD42241.1    AB472107    BAH66324.1    KX656003    AOG12952.1    ODYU01001027    SOQ36675.1    MG816592    AXF48777.1    KY283603    AST36262.1    KT588146    AOE48056.1    GCVX01000184    JAI18046.1    LC002706    BAR43454.1    JN836695    AFC91735.2    MG816594    AXF48779.1    BK005935    DAA05985.1    KY283655    AST36314.1    KY707201    AVF19643.1    KM655544    AIT71994.1    AB472109    BAH66326.1    KX655997    AOG12946.1    KR935726    ALM26218.1    KY283644    AST36303.1    GENK01000083    JAV45830.1    KM655534    AIT71984.1    KM597198    AIT69875.1    MG816583    AXF48768.1    JN836696    AFC91736.1    KF487690    AII01088.1    LC002716    BAR43464.1    KM892382    AJF23797.1    KY283591    AST36251.1    KM892372    AJF23787.1    KF768685    KZ149966    AIG51879.1    PZC76166.1    GCVX01000172    JAI18058.1    KY707231    AVF19673.1    GCVX01000186    JAI18044.1    KX084463    ARO76418.1    JTDY01002113    KOB72079.1    KY225500    ARO70512.1    KM655545    AIT71995.1    KT588156    AOE48066.1    KY283657    AST36316.1   

Proteomes

UP000037510    UP000053240    UP000007151    UP000218220    UP000053268    UP000005204    + More

PRIDE

C4B7Y4    A7E3G9    H9JL95    C4B7V8    A7E3H0    C4B7W0    + More

Pfam

PF02949   7tm_6

Interpro

IPR004117   7tm6_olfct_rcpt       

ProteinModelPortal

C4B7Y4   A0A075T7Z4   A0A0E4B3V1   A0A2L1TG61   A0A2K8GKU3   A0A0P1IVM5   + More
A0A1B3B748   A0A076E7L9   A0A0S1TPT8   A0A1B3P5P2   A0A3G6V6U8   A0A2H1WJJ5   A0A345BEW9   A0A1X9PB04   A0A0L7LII6   A0A076EDE7   A0A0L7LHW9   A0A223HD25   A0A0B5GPZ4   A0A0K8TUA5   A0A223HD66   A0A0V0J105   A0A097IYJ1   A0A0N1IQ17   A0A223HDF8   A0A0B5CUN7   A0A345BET9   A0A3Q8HEA2   A0A212FLU3   A0A212FLU2   A0A0N1PHF6   A0A2K5B187   A0A3G6V734   A0A1S5XXQ3   A0A075TD69   A0A2H1WWR9   A0A2K8GKW0   A0A1B2G2M1   A0A2L1TG50   A0A2A4IZ79   A0A2K8GKV8   A0A194PZB7   A7E3G9   A0A1S5XXN4   A0A0B5GI82   A0A1B3B777   A0A223HDD9   A0A0B5CMZ5   A0A223HDE1   A0A097ITU2   H9JL95   A0A223HD11   A0A0P1J4K6   A0A194RLU9   A0A1S5XXN6   A0A0V0J152   A0A212FK07   A0A0L7L3G4   A0A386H9I1   C4B7V8   A0A1B3P5T6   A0A2H1V744   A0A345BEV3   A0A223HD09   A0A1B3B784   A0A0K8TUU9   A0A0E4FIB5   H9A5P5   A0A345BEV5   A7E3H0   A0A223HD67   A0A2L1TG52   A0A097IYK8   C4B7W0   A0A1B3P5P8   A0A0S1TKZ3   A0A223HD55   A0A1V1WC62   A0A097IYJ6   A0A097ITT3   A0A345BEU4   H9A5P6   A0A076E9B8   A0A0E4B5A3   A0A0B5GQ06   A0A223HD07   A0A0B5GPZ8   A0A075T6X4   A0A0K8TUT9   A0A2L1TG81   A0A0K8TU74   A0A1Y9TK86   A0A0L7L9K8   A0A2K8GL40   A0A097IYL5   A0A1B3B787   A0A223HD50  

KEGG

100379311    K22984 odorant receptor | (RefSeq) Or-56, BmOr-56; olfactory receptor 56

GO

GO:0005549   GO:0005886   GO:0016021   GO:0007165   GO:0004984   GO:0007608   GO:0016020   GO:0033557   GO:0005839   GO:0051603   GO:0046835   GO:0006281   GO:0006259  

PANTHER

PTHR21137  

Subcellular location

Cell membrane  

Length:

262

Number of predicted TMHs:

4

Exp number of AAs in TMHs:

83.654

Exp number, first 60 AAs:

21.95289

Total prob of N-in:

0.90544

POSSIBLE N-term signal

sequence

inside

1  -  37

TMhelix

38  -  60

outside

61  -  74

TMhelix

75  -  94

inside

95  -  131

TMhelix

132  -  151

outside

152  -  197

TMhelix

198  -  220

inside

221  -  262

 

 

Pi

265.858245

Theta

217.505593

Tajima's D

0.712739

CLR

0.232733

CSRT

0.576321183940803

Interpretation

Uncertain