SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO16382
Pre Gene Modal
BGIBMGA013740
Annotation
hypothetical_protein_RR48_00843?_partial_[Papilio_machaon]
Location in the cell
Extracellular   Reliability : 2.01 Nuclear   Reliability : 1.939
 

Sequence

CDS
ATGTACTGTTTGTTAACAGATGTAGAGTCGATACTTGATTATCACTCAATGCCGGCTCTGTCTGAGCTGGACGACTTCGATCTGTGCCTGAAGAATCCTGAAGCATTGTATTGCATTGTGGACATGGTGCTAATGGAAGATGACACGCCACTGTATCAATTTATTAAGAACTTCTCTTCGTTATCGTACAAAAACTACATGCACTCTAAGCTCCACCGAGGAGTCTGCGCGTCGCAAAACTGTGGACTTAACACAACGTACGCCAATCAAACCGACACCACCGAAAATGAATTGAAGAGATGCTTCAATTCCAGCATACACGAAGGATACGGTCTTCAACAACTATTTGCCAGTTAA
Protein
MYCLLTDVESILDYHSMPALSELDDFDLCLKNPEALYCIVDMVLMEDDTPLYQFIKNFSSLSYKNYMHSKLHRGVCASQNCGLNTTYANQTDTTENELKRCFNSSIHEGYGLQQLFAS

Summary

EMBL
KQ460527    KPJ14160.1    NWSH01001072    PCG72763.1    ODYU01007576    SOQ50462.1    + More
KQ459054    KPJ03931.1    RSAL01000159    RVE45485.1    JX846987    AGG55004.1    JTDY01000386    KOB77428.1    KZ150068    PZC74094.1    RSAL01000205    RVE44373.1    AGBW02015045    OWR40663.1    ODYU01007420    SOQ50170.1    KQ461184    KPJ07529.1    KQ459053    KPJ04122.1    AK404010    BAM20092.1    PZC74095.1    KQ459449    KPJ00879.1    AGBW02008687    OWR52781.1    KPJ00884.1    JTDY01002029    KOB72286.1    SOQ50171.1    KQ459582    KPI98974.1    NWSH01001667    PCG70473.1    KPJ04119.1    PCG70472.1    KPJ07535.1    JTDY01006970    KOB65560.1    KPJ07525.1    AGBW02007654    OWR54852.1    KQ461073    KPJ09500.1    KPJ04116.1    KPJ00872.1    ODYU01003108    SOQ41449.1    SOQ50173.1    KQ460436    KPJ14724.1    AGBW02012502    OWR44975.1    JTDY01003022    KOB70291.1    KPJ04014.1    KZ150085    PZC73777.1    SOQ50174.1    KPI98970.1    NWSH01001633    PCG70632.1    BABH01004270    BABH01004271    PCG70631.1    JTDY01004025    KOB68696.1    JTDY01008922    KOB64310.1    DS232017    EDS31994.1    JTDY01001334    KOB74163.1    GEZM01096347    GEZM01096341    JAV54964.1    GEZM01096338    JAV54974.1    JTDY01000850    KOB75674.1    NWSH01000045    PCG80257.1    ODYU01002360    SOQ39759.1   
Pfam
PF01757   Acyl_transf_3        + More
PF02958   EcKinase
PF00975   Thioesterase
PF16197   KAsynt_C_assoc
PF00698   Acyl_transf_1
PF00109   ketoacyl-synt
PF02801   Ketoacyl-synt_C
PF04488   Gly_transf_sug
PF00348   polyprenyl_synt
PF00089   Trypsin
Interpro
IPR002656   Acyl_transf_3        + More
IPR004119   EcKinase-like       
IPR011009   Kinase-like_dom_sf       
IPR015897   CHK_kinase-like       
IPR020801   PKS_acyl_transferase       
IPR016039   Thiolase-like       
IPR014030   Ketoacyl_synth_N       
IPR020843   PKS_ER       
IPR001227   Ac_transferase_dom_sf       
IPR029058   AB_hydrolase       
IPR020841   PKS_Beta-ketoAc_synthase_dom       
IPR023102   Fatty_acid_synthase_dom_2       
IPR014031   Ketoacyl_synth_C       
IPR016035   Acyl_Trfase/lysoPLipase       
IPR016036   Malonyl_transacylase_ACP-bd       
IPR036291   NAD(P)-bd_dom_sf       
IPR014043   Acyl_transferase       
IPR001031   Thioesterase       
IPR032821   KAsynt_C_assoc       
IPR011032   GroES-like_sf       
IPR042104   PKS_dehydratase_sf       
IPR007577   GlycoTrfase_DXD_sugar-bd_CS       
IPR000092   Polyprenyl_synt       
IPR039702   FPS1       
IPR008949   Isoprenoid_synthase_dom_sf       
IPR009003   Peptidase_S1_PA       
IPR001254   Trypsin_dom       
SUPFAM
SSF56112   SSF56112        + More
SSF53901   SSF53901       
SSF53474   SSF53474       
SSF52151   SSF52151       
SSF51735   SSF51735       
SSF50129   SSF50129       
SSF55048   SSF55048       
SSF48576   SSF48576       
SSF50494   SSF50494       

Ontologies

Topology

Length:
118
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00129
Exp number, first 60 AAs:
0.00089
Total prob of N-in:
0.13549
outside
1  -  118
 
 

Population Genetic Test Statistics

Pi
48.445434
Theta
42.092038
Tajima's D
1.311949
CLR
3.331559
CSRT
0.747812609369532
Interpretation
Uncertain
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