Gene

KWMTBOMO16376

Pre Gene Modal

BGIBMGA013742

Annotation

PREDICTED:_PRKCA-binding_protein_isoform_X2_[Bombyx_mori]

Location

Bomo_Chr28(-):7510220-7523225      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 3.192

CDS

ATGATGCAAGAATATGAAGACGACTTTTTATTTGAAGAGGATAAAATGGGTATGATCGTGACGTCTGGTAGCGTCGTGCTGAGTAAAGATGAAAAGAACTTGATAGGTATCAGCATCGGTGGTGGAGCTCCATTGTGTCCATGCCTTTACATCGTACAGATATTCGACAACACTCCAGCATCCAAGGAAGGCACCCTGCAGAGCGGTGACGAGCTGGTCGGTGTCAATGGGCAGTCCGTAAAAGGAAAAACCAAAGTTGAGGTCGCGAAAATGATACAGTCGGCCAAGGATGAAGTAACAATAAACTATAACAAACTCCACGCCGATCCCAAACAAGGGAAAAGTCTAGATATAATCATGAAGAAGATGAAACACAGATTAGTAGAGAACATGTCTTCGGGGGCCGCTGATGCCCTTGGATTATCGAGGGCTATACTGTGCAATGACACGCTGGTAGCGAAACTGGACGAGCTGAGGGAAACCGAGAATACATACAAGAGACTCGTGGAGCATTCTAAGAGAATGTTAAAGTCGTACTTTGACTTACTCCAAACTTACAAAGCTGTCGGGGATATATTCTCGGCGATCGGGGTGAGAGAGCCTCAGGCTAGAGCTTCCGAGGCTTTCTCGAAGTTCGGTCAATATCATAGACTGCTCGAACGAGACGGCATTAAAATGTTGAAAACTCTAAAGCCGATCCTGTCTGACATGGGCACTTACTTGAACAAAGCTATACCGGACACCAAATTGACGATAAGGAAATACGCGGACACGAAATTCGAGTATCTGTCCTACTGTCTGAAGGTCAAAGAGATGGATGACGAGGAATACGGGTATAACGCTCTGCAGGAGCCTCTGTACCGAGTGGAAACCGGGAATTATGAATATAGGTTGATATTGCGTTGTCGCCAAGACGCCAGAACAAGGTTCGCCAGACTCAGGTCGGACGTTCTGGTAAAGCTGGAGCTTCTAGAGAATAAGAAAGCGCAGGACGTCGCCCATCAACTCAAGAAGTTCATTCAGGGACTGGCCGTTTACCACAACGAAACCTTGGAGCATTTAATGGAGAATTCTACATTGTTCCCAGTCGAAGTTGACCTCTCGCAGAACTGTTTTCAGTATAAATCGGCAGGTCAAATTAGTGAGGACGTCCAAGATGAAGATATAGAATACGCAAAAGAAATACAAGAGTACCACGATTTGTCTGTTAACGACACGAGAGAGGCGAAGTTGATGAAGAAACGTCAGACGGACGACAATGAGCACAATGACGCTACCGAACAGCTTCTCCCGGGTATCGACACCGTTGACATTGACAGGTCCGAGAATAATGACGTTTCGGACAACTTGACACTCCTGACAGAGCTAGGGCTGGCGGACGCGGGAGCCAATGACGAATTCGGGAGCTTCCAAAACGGACTGATGGACGATTTCATGCCGAAGAGCAGCAGCGACGTCGATGACGTTTTCGATAAGCTGTTGAACGATTTGAGTATCGGAAAATAA

Protein

MMQEYEDDFLFEEDKMGMIVTSGSVVLSKDEKNLIGISIGGGAPLCPCLYIVQIFDNTPASKEGTLQSGDELVGVNGQSVKGKTKVEVAKMIQSAKDEVTINYNKLHADPKQGKSLDIIMKKMKHRLVENMSSGAADALGLSRAILCNDTLVAKLDELRETENTYKRLVEHSKRMLKSYFDLLQTYKAVGDIFSAIGVREPQARASEAFSKFGQYHRLLERDGIKMLKTLKPILSDMGTYLNKAIPDTKLTIRKYADTKFEYLSYCLKVKEMDDEEYGYNALQEPLYRVETGNYEYRLILRCRQDARTRFARLRSDVLVKLELLENKKAQDVAHQLKKFIQGLAVYHNETLEHLMENSTLFPVEVDLSQNCFQYKSAGQISEDVQDEDIEYAKEIQEYHDLSVNDTREAKLMKKRQTDDNEHNDATEQLLPGIDTVDIDRSENNDVSDNLTLLTELGLADAGANDEFGSFQNGLMDDFMPKSSSDVDDVFDKLLNDLSIGK

Uniprot

H9JW29   A0A2H1W120   A0A1E1WTG6   A0A2A4JWZ9   A0A2A4JYG0   A0A1E1WU61   + More
E0AE01   A0A212EXH0   A0A194QEU0   Q179Z8   A0A1S4GX24   A0A2J7Q1Z0   A0A084VUJ5   B0WEC7   A0A2J7Q1Y3   A0A182JDB4   A0A182IEK3   Q7Q3E3   A0A182X1M3   A0A182L2E6   A0A182TQV1   A0A182UTW7   A0A2J7Q1X9   A0A182F2Z9   A0A182QR49   A0A2J7Q1X8   A0A182JZU0   A0A182R3C0   A0A0A9WUN8   A0A182MFB7   A0A1Q3FYV3   A0A182GRF1   A0A182MZF5   A0A182WA31   A0A182SAY4   A0A0A9X221   A0A1B6CB83   A0A2P8YHA5   A0A1W4XUI1   A0A146M315   D6W6B9   A0A1B6E8U1   A0A131YVU5   A0A1B6CT37   N6UD82   E0VGF8   A0A023GCL6   A0A1W4UTJ4   A0A0J9R1G1   A0A182YGR6   Q8SY07   A0A0P9A5N5   B3N3D2   A0A1B6D349   A0A0R1DMD6   A0A1Y1N2C8   A0A1L8DJE2   A0A1L8DM79   A0A2R5LDK8   A0A1W4XTL2   V9ICV7   A0A293MTF9   A0A1W4XJH4   A0A0R3NTZ0   A0A131XNL6   A0A1B6CG67   A0A1V9XUE6   A0A0Q9X3U2   K7IYN3   A0A1B6D7R3   A0A0C9RVG5   A0A0A1WVU7   A0A3S3NWF1   W8C1N0   A0A147BTM3   A0A034VQN1   B4KIN4   A0A0K8V8K8   A0A0L7QNV3   A0A1W4V5W7   I6YMZ0   B3MNJ3   B4Q486   A0A0J9TM68   X2JDZ1   A0A0P4XQH1   B4MDL9   A0A0P4XJ46   A0A0M5J3W9   A0A0J9R150   A0A3S0ZXP0   A0A0Q5WJK4   V4AYC5   A0A2C9JFN1   A0A0M8ZNU5   A0A026WK07   T1FPB1   A0A0L8FFN4   A0A195ED00  

Pubmed

19121390    21122821    22118469    26354079    17510324    12364791    + More
24438588    20966253    25401762    26483478    26823975    29403074    18362917    19820115    26830274    23537049    20566863    22936249    25244985    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    17994087    17550304    28004739    15632085    28049606    28327890    20075255    25830018    24495485    29652888    25348373    22772333    23254933    15562597    24508170   

EMBL

BABH01025562    ODYU01005656    SOQ46727.1    GDQN01000802    JAT90252.1    NWSH01000420    + More
PCG76521.1    PCG76523.1    GDQN01000688    JAT90366.1    HM747956    ADK97802.1    AGBW02011772    OWR46161.1    KQ459054    KPJ03939.1    CH477342    EAT43073.1    AAAB01008964    NEVH01019376    PNF22593.1    ATLV01016849    ATLV01016850    KE525120    KFB41639.1    DS231907    EDS45487.1    PNF22594.1    APCN01005204    EAA12249.4    PNF22591.1    AXCN02000606    PNF22595.1    GBHO01032493    JAG11111.1    AXCM01010786    GFDL01002332    JAV32713.1    JXUM01016215    KQ560452    KXJ82350.1    GBHO01032494    GBRD01003810    GDHC01015827    JAG11110.1    JAG62011.1    JAQ02802.1    GEDC01026604    JAS10694.1    PYGN01000596    PSN43631.1    GDHC01005247    JAQ13382.1    KQ971319    EFA11378.1    GEDC01003024    JAS34274.1    GEDV01005912    JAP82645.1    GEDC01020803    JAS16495.1    APGK01033018    APGK01033019    KB740860    KB632042    ENN78571.1    ERL88238.1    DS235142    EEB12464.1    GBBM01003809    JAC31609.1    CM002910    KMY89951.1    AE014134    AY075464    AAF53213.2    AAL68277.1    CH902620    KPU73785.1    CH954177    EDV58772.2    GEDC01017177    JAS20121.1    CM000157    KRJ97645.1    GEZM01014752    JAV92012.1    GFDF01007597    JAV06487.1    GFDF01006644    JAV07440.1    GGLE01003422    MBY07548.1    JR039953    AEY58920.1    GFWV01018661    MAA43389.1    CH379061    KRT04578.1    GEFH01000833    JAP67748.1    GEDC01024919    GEDC01004871    JAS12379.1    JAS32427.1    MNPL01003910    OQR77127.1    CH933807    KRG02671.1    GEDC01015577    JAS21721.1    GBYB01012910    JAG82677.1    GBXI01011103    JAD03189.1    NCKU01002090    RWS10450.1    GAMC01010981    JAB95574.1    GEGO01001303    JAR94101.1    GAKP01015079    GAKP01015076    JAC43873.1    EDW11377.1    GDHF01017103    JAI35211.1    KQ414843    KOC60303.1    JX049540    AFN65700.1    EDV32101.1    CM000361    EDX04836.1    KMY89950.1    AHN54395.1    GDIP01240549    GDIP01053320    JAI82852.1    CH940661    EDW71280.1    GDIP01240550    GDIP01240548    JAI82851.1    CP012523    ALC39444.1    KMY89952.1    RQTK01000080    RUS88536.1    KQS70510.1    KB201234    ESO98636.1    KQ435955    KOX68045.1    KK107167    EZA56350.1    AMQM01007939    KB097694    ESN91862.1    KQ433417    KOF62442.1    KQ979074    KYN22719.1   

Proteomes

UP000005204    UP000218220    UP000007151    UP000053268    UP000008820    UP000235965    + More
UP000030765    UP000002320    UP000075880    UP000075840    UP000007062    UP000076407    UP000075882    UP000075902    UP000075903    UP000069272    UP000075886    UP000075881    UP000075900    UP000075883    UP000069940    UP000249989    UP000075884    UP000075920    UP000075901    UP000245037    UP000192223    UP000007266    UP000019118    UP000030742    UP000009046    UP000192221    UP000076408    UP000000803    UP000007801    UP000008711    UP000002282    UP000001819    UP000192247    UP000009192    UP000002358    UP000285301    UP000053825    UP000000304    UP000008792    UP000092553    UP000271974    UP000030746    UP000076420    UP000053105    UP000053097    UP000015101    UP000053454    UP000078492   

PRIDE

H9JW29    Q8SY07   

Pfam

PF00595   PDZ        + More
PF06456   Arfaptin
PF17820   PDZ_6

Interpro

IPR030798   Arfaptin_fam        + More
IPR027267   AH/BAR_dom_sf       
IPR037959   PICK1_BAR       
IPR010504   AH_dom       
IPR001478   PDZ       
IPR036034   PDZ_sf       
IPR041489   PDZ_6       

SUPFAM

SSF103657   SSF103657        + More
SSF50156   SSF50156       

Gene 3D

1.20.1270.60    

CDD

cd07659  BAR_PICK1

ProteinModelPortal

H9JW29   A0A2H1W120   A0A1E1WTG6   A0A2A4JWZ9   A0A2A4JYG0   A0A1E1WU61   + More
E0AE01   A0A212EXH0   A0A194QEU0   Q179Z8   A0A1S4GX24   A0A2J7Q1Z0   A0A084VUJ5   B0WEC7   A0A2J7Q1Y3   A0A182JDB4   A0A182IEK3   Q7Q3E3   A0A182X1M3   A0A182L2E6   A0A182TQV1   A0A182UTW7   A0A2J7Q1X9   A0A182F2Z9   A0A182QR49   A0A2J7Q1X8   A0A182JZU0   A0A182R3C0   A0A0A9WUN8   A0A182MFB7   A0A1Q3FYV3   A0A182GRF1   A0A182MZF5   A0A182WA31   A0A182SAY4   A0A0A9X221   A0A1B6CB83   A0A2P8YHA5   A0A1W4XUI1   A0A146M315   D6W6B9   A0A1B6E8U1   A0A131YVU5   A0A1B6CT37   N6UD82   E0VGF8   A0A023GCL6   A0A1W4UTJ4   A0A0J9R1G1   A0A182YGR6   Q8SY07   A0A0P9A5N5   B3N3D2   A0A1B6D349   A0A0R1DMD6   A0A1Y1N2C8   A0A1L8DJE2   A0A1L8DM79   A0A2R5LDK8   A0A1W4XTL2   V9ICV7   A0A293MTF9   A0A1W4XJH4   A0A0R3NTZ0   A0A131XNL6   A0A1B6CG67   A0A1V9XUE6   A0A0Q9X3U2   K7IYN3   A0A1B6D7R3   A0A0C9RVG5   A0A0A1WVU7   A0A3S3NWF1   W8C1N0   A0A147BTM3   A0A034VQN1   B4KIN4   A0A0K8V8K8   A0A0L7QNV3   A0A1W4V5W7   I6YMZ0   B3MNJ3   B4Q486   A0A0J9TM68   X2JDZ1   A0A0P4XQH1   B4MDL9   A0A0P4XJ46   A0A0M5J3W9   A0A0J9R150   A0A3S0ZXP0   A0A0Q5WJK4   V4AYC5   A0A2C9JFN1   A0A0M8ZNU5   A0A026WK07   T1FPB1   A0A0L8FFN4   A0A195ED00  

PDB

3HPK     E-value=1.80084e-37,     Score=392

KEGG

101737711    no KO assigned | (RefSeq) PRKCA-binding protein

GO

GO:0019904   GO:0016301   GO:0002092   GO:0014069   GO:0005543   GO:0005886   GO:0043005   GO:0008021   GO:0043113   GO:0006886   GO:0045202   GO:0005737   GO:0097062   GO:0097061   GO:0032588   GO:0005080   GO:0098842   GO:0048639   GO:0071329   GO:0045055   GO:0043025   GO:0099175   GO:0005515   GO:0005840   GO:0006412   GO:0033557   GO:0005839   GO:0051603   GO:0046835   GO:0006281   GO:0006259  

PANTHER

PTHR12141  

Length:

501

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.9031

Exp number, first 60 AAs:

0.90029

Total prob of N-in:

0.03968

outside

1  -  501

 

 

Pi

296.423712

Theta

168.190172

Tajima's D

2.874543

CLR

0.236982

CSRT

0.972101394930253

Interpretation

Uncertain