Gene

KWMTBOMO16375  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA013801

Annotation

PREDICTED:_charged_multivesicular_body_protein_4b_[Papilio_polytes]

Location

Bomo_Chr28(+):7493046-7499815      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.902 Nuclear   Reliability : 2.204

CDS

ATGAGTTTTCTCGGGAAAATATTCGGTGGCAAAAAAGAAGAGAAGGGGCCCACTACGCATGAAGCTATCCAAAAACTCCGTGAAACTGAAGAATTGCTGATCAAGAAGCAAGAGTTTTTGGAAAAGAAGATCGATTTAGAAGTACAGACAGCCAGGAAACATGGCACTAAGAACAAAAGAGCTGCCATTGCAGCTCTCAAGCGGAAGAAGAGATACGAGAAGCAACTTACTCAAATAGATGGGACCCTCACTCAGATTGAGGCCCAAAGGGAAGCGCTAGAAGGTGCCAATACCAATGCCCAAGTATTGAACACTATGCGCGAGGCAGCTAATGCCATGAAGCTCGCACACAAAGACATTGATGTGGACAAAGTACACGATATCATGGATGATATTGCTGAACAACACGACATCTCTCGTGAGATCACCGAGGCGATCAGTAACAATGTGGCCTTCCCTAATGATATAGATGAAGATGAACTCGAGAAGGAACTTGAAGAATTAGAACAGGAGGATCTGGACAAGGAGATGCTGGGCATCAACGTGCCGACGGACACGCTGCCCGATGTCCCGGCCTCGGAACTGGTACACGACAAACCCAAACCGAGCAAGTCGAAACAGACAGAGGATGACGATGAGCTTGCTCAGCTGCAGTCGTGGGCCACATAG

Protein

MSFLGKIFGGKKEEKGPTTHEAIQKLRETEELLIKKQEFLEKKIDLEVQTARKHGTKNKRAAIAALKRKKRYEKQLTQIDGTLTQIEAQREALEGANTNAQVLNTMREAANAMKLAHKDIDVDKVHDIMDDIAEQHDISREITEAISNNVAFPNDIDEDELEKELEELEQEDLDKEMLGINVPTDTLPDVPASELVHDKPKPSKSKQTEDDDELAQLQSWAT

Uniprot

A0A2A4JXJ1   A0A1V0JHU9   A0A194QKF6   H9JW87   A0A0N1IJ71   S4NSU7   + More
A0A3S2LCE9   A0A212ETP8   A0A0N1PGQ6   A0A1B6IE32   A0A0L7RCT8   A0A1W4WVV1   A0A1B6LBV6   A0A067R236   A0A0J7KW61   A0A0C9PIQ5   A0A151JP72   F4WBC6   A0A151JZM8   A0A158NAX0   A0A151X9R1   R4G4L2   A0A0P4X966   A0A151IP09   A0A1D2NG42   A0A232FE85   A0A1S3CXS3   A0A0P5FIT0   A0A0T6B0F6   E0VAJ6   A0A023F9J3   E2C316   A0A0V0G653   A0A1B6H014   K7IP52   A0A0A9Y694   D1FQ45   A0A0P5X495   A0A0P5TD42   A0A0M8ZZM3   A0A088ARB1   E9HGK4   A0A2R7WAE3   V9IKA6   A0A1Y1LPA9   A0A2A3EDI6   A0A084W2H9   A0A023EMD8   A0A0A1XJD6   W8BU09   A0A226DMN1   Q17KG9   A0A0K8VN15   E2A5M9   A0A034WDQ3   A0A0M5J4V0   A0A182MN93   B4NNL3   A0A151HY47   A0A026WRU2   A0A0N7ZGD6   A0A0K8TT00   A0A182TP28   A0A2M4AB03   A0A2M4AAZ0   A0A182N880   A0A182Q9X8   A0A3F2YSS7   A0A182VBT5   A0A182XD53   A0A182KVZ3   Q7Q7G8   W5JRM1   A0A2M4CX45   A0A182TBV8   B3MDH4   B4ME56   A0A2M3Z3J7   A0A0B2VM91   D3TLF1   A0A182IRJ4   A0A1A9ZNQ5   A0A1A9VY33   A0A085NN14   A0A0N5D2H2   A0A1L8EE00   A0A154PIW9   B4KQL4   A0A077Z7D9   A0A1B0B239   A0A1A9WMU2   A0A1A9XJA4   T1E8Y5   F1L3E1   A0A0Q9WW21   A0A183I754   A0A1L8EMW7   A0A3R7PXM5   A0A0H5SMH3  

Pubmed

26354079    19121390    23622113    22118469    24845553    21719571    + More
21347285    27289101    28648823    20566863    25474469    20798317    20075255    25401762    26823975    21292972    28004739    24438588    24945155    26483478    25830018    24495485    17510324    25348373    17994087    24508170    30249741    26369729    20966253    12364791    14747013    17210077    20920257    23761445    20353571    24929829    21685128    27762356    17885136   

EMBL

NWSH01000420    PCG76519.1    KY694526    ARD08867.1    KQ459054    KPJ03941.1    + More
BABH01025560    KQ459999    KPJ18492.1    GAIX01012426    JAA80134.1    RSAL01000240    RVE43680.1    AGBW02012535    OWR44875.1    KQ458517    KPJ05848.1    GECU01022556    JAS85150.1    KQ414615    KOC68605.1    GEBQ01018809    JAT21168.1    KK852981    KDR12954.1    LBMM01002492    KMQ94747.1    GBYB01000828    JAG70595.1    KQ978756    KYN28583.1    GL888062    EGI68482.1    KQ981451    KYN41606.1    ADTU01010426    ADTU01010427    ADTU01010428    KQ982365    KYQ57103.1    ACPB03002868    GAHY01000676    JAA76834.1    GDIP01246412    JAI76989.1    KQ976899    KYN07203.1    LJIJ01000050    ODN04233.1    NNAY01000372    OXU28820.1    GDIQ01256529    JAJ95195.1    LJIG01016324    KRT80943.1    DS235006    EEB10402.1    GBBI01000560    JAC18152.1    GL452257    EFN77673.1    GECL01002661    JAP03463.1    GECZ01001764    JAS68005.1    GBHO01015897    GBHO01015895    GBRD01001571    GDHC01019754    JAG27707.1    JAG27709.1    JAG64250.1    JAP98874.1    EZ419945    ACZ28300.1    GDIP01077912    JAM25803.1    GDIP01129160    JAL74554.1    KQ435791    KOX74360.1    GL732642    EFX69136.1    KK854513    PTY16488.1    JR051415    AEY61495.1    GEZM01051861    JAV74658.1    KZ288289    PBC29289.1    ATLV01019619    KE525275    KFB44423.1    JXUM01008014    JXUM01008015    GAPW01004119    KQ560251    JAC09479.1    KXJ83558.1    GBXI01003230    GBXI01000184    JAD11062.1    JAD14108.1    GAMC01003873    GAMC01003872    JAC02683.1    LNIX01000017    OXA45476.1    CH477224    EAT47182.1    GDHF01012042    JAI40272.1    GL437023    EFN71226.1    GAKP01007029    JAC51923.1    CP012524    ALC41568.1    AXCM01004465    AXCM01012800    CH964282    EDW85952.1    KQ976728    KYM76497.1    KK107119    QOIP01000009    EZA58770.1    RLU18856.1    GDIP01248049    JAI75352.1    GDAI01000335    JAI17268.1    GGFK01004643    MBW37964.1    GGFK01004624    MBW37945.1    AXCN02000959    APCN01004443    AAAB01008960    EAA11799.3    ADMH02000550    ETN65923.1    GGFL01005661    MBW69839.1    CH902619    EDV36422.1    CH940662    EDW58821.1    GGFM01002324    MBW23075.1    JPKZ01001349    UYWY01021622    KHN82474.1    VDM44551.1    CCAG010007048    EZ422253    ADD18529.1    KL363186    KL367485    KFD57958.1    KFD70860.1    UYYF01004472    VDN04495.1    GFDG01001980    JAV16819.1    KQ434931    KZC11767.1    CH933808    EDW08183.1    HG805970    CDW55664.1    JXJN01007396    GAMD01002348    JAA99242.1    JI170585    ADY44645.1    KRG00319.1    UZAJ01042378    VDP22615.1    CM004483    OCT60619.1    QCYY01001130    ROT80330.1    LN856992    CRZ24917.1   

Proteomes

UP000218220    UP000053268    UP000005204    UP000053240    UP000283053    UP000007151    + More
UP000053825    UP000192223    UP000027135    UP000036403    UP000078492    UP000007755    UP000078541    UP000005205    UP000075809    UP000015103    UP000078542    UP000094527    UP000215335    UP000079169    UP000009046    UP000008237    UP000002358    UP000053105    UP000005203    UP000000305    UP000242457    UP000030765    UP000069940    UP000249989    UP000198287    UP000008820    UP000000311    UP000092553    UP000075883    UP000007798    UP000078540    UP000053097    UP000279307    UP000075902    UP000075884    UP000075886    UP000075840    UP000075903    UP000076407    UP000075882    UP000007062    UP000000673    UP000075901    UP000007801    UP000008792    UP000031036    UP000050794    UP000267007    UP000092444    UP000075880    UP000092445    UP000078200    UP000046394    UP000276776    UP000076502    UP000009192    UP000030665    UP000092460    UP000091820    UP000092443    UP000050787    UP000186698    UP000283509   

PRIDE

H9JW87    A0A088ARB1   

Pfam

PF03357   Snf7        + More
PF07690   MFS_1

Interpro

IPR005024   Snf7_fam        + More
IPR005829   Sugar_transporter_CS       
IPR020846   MFS_dom       
IPR036259   MFS_trans_sf       
IPR011701   MFS       

SUPFAM

SSF103473   SSF103473       

CDD

cd06174  MFS

ProteinModelPortal

A0A2A4JXJ1   A0A1V0JHU9   A0A194QKF6   H9JW87   A0A0N1IJ71   S4NSU7   + More
A0A3S2LCE9   A0A212ETP8   A0A0N1PGQ6   A0A1B6IE32   A0A0L7RCT8   A0A1W4WVV1   A0A1B6LBV6   A0A067R236   A0A0J7KW61   A0A0C9PIQ5   A0A151JP72   F4WBC6   A0A151JZM8   A0A158NAX0   A0A151X9R1   R4G4L2   A0A0P4X966   A0A151IP09   A0A1D2NG42   A0A232FE85   A0A1S3CXS3   A0A0P5FIT0   A0A0T6B0F6   E0VAJ6   A0A023F9J3   E2C316   A0A0V0G653   A0A1B6H014   K7IP52   A0A0A9Y694   D1FQ45   A0A0P5X495   A0A0P5TD42   A0A0M8ZZM3   A0A088ARB1   E9HGK4   A0A2R7WAE3   V9IKA6   A0A1Y1LPA9   A0A2A3EDI6   A0A084W2H9   A0A023EMD8   A0A0A1XJD6   W8BU09   A0A226DMN1   Q17KG9   A0A0K8VN15   E2A5M9   A0A034WDQ3   A0A0M5J4V0   A0A182MN93   B4NNL3   A0A151HY47   A0A026WRU2   A0A0N7ZGD6   A0A0K8TT00   A0A182TP28   A0A2M4AB03   A0A2M4AAZ0   A0A182N880   A0A182Q9X8   A0A3F2YSS7   A0A182VBT5   A0A182XD53   A0A182KVZ3   Q7Q7G8   W5JRM1   A0A2M4CX45   A0A182TBV8   B3MDH4   B4ME56   A0A2M3Z3J7   A0A0B2VM91   D3TLF1   A0A182IRJ4   A0A1A9ZNQ5   A0A1A9VY33   A0A085NN14   A0A0N5D2H2   A0A1L8EE00   A0A154PIW9   B4KQL4   A0A077Z7D9   A0A1B0B239   A0A1A9WMU2   A0A1A9XJA4   T1E8Y5   F1L3E1   A0A0Q9WW21   A0A183I754   A0A1L8EMW7   A0A3R7PXM5   A0A0H5SMH3  

PDB

5J45     E-value=8.72207e-27,     Score=296

KEGG

101737568    K12194 charged multivesicular body protein 4 | (RefSeq) charged multivesicular body protein 4b

PATHWAY

04144    Endocytosis - Bombyx mori (domestic silkworm)

GO

GO:0007034   GO:0043162   GO:0016322   GO:0000281   GO:0048132   GO:0006914   GO:0070938   GO:0044130   GO:0032509   GO:1990635   GO:0045169   GO:0048813   GO:0005771   GO:0043025   GO:0030496   GO:0055085   GO:0016021   GO:0005215   GO:0005488   GO:0005840   GO:0006412   GO:0033557   GO:0005839   GO:0051603   GO:0046835   GO:0006281   GO:0006259  

Length:

222

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00720

outside

1  -  222

 

 

Pi

29.378917

Theta

22.952708

Tajima's D

2.357958

CLR

0.075305

CSRT

0.932453377331133

Interpretation

Uncertain