Gene

KWMTBOMO16374  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA013743

Annotation

Armadillo_repeat-containing_protein_[Operophtera_brumata]

Location

Bomo_Chr28(-):7487364-7492215      View in EpiBrowser

Full name

Armadillo repeat-containing protein 6 homolog       + More
Armadillo repeat-containing protein 6      

Location in the cell

Cytoplasmic   Reliability : 1.296 Nuclear   Reliability : 1.378

CDS

ATGGACACGCAACCAGATTTGCTTGACGCAAAAGGCATTGACTTGATAAAAACAATTTTAGATAATGTAGAGAATGATGACATTCTTGTAGGAACATTGAAATGGGCGTCCACTTGTTGTATCAAACACGAAATGAACAGACAGCGGTTGTTCGCTAAAAACATCACAGAAAACCTAAAATTACTTATAAAGGTCGCCGGCAATGAAAAGGACTTACTTTTTGGAATATGA

Protein

MDTQPDLLDAKGIDLIKTILDNVENDDILVGTLKWASTCCIKHEMNRQRLFAKNITENLKLLIKVAGNEKDLLFGI

Similarity

Belongs to the ARMC6 family.

Keywords

Complete proteome   Phosphoprotein   Reference proteome   Repeat   Alternative splicing  

Feature

chain  Armadillo repeat-containing protein 6 homolog
splice variant  In isoform 2.

Uniprot

H9JW30   A0A2A4IWS7   A0A2H1VV26   A0A3S2LST3   A0A0L7LBQ8   A0A212F8Q1   + More
A0A212ETR1   A0A194PIS0   A0A067RF47   A0A0T6AVQ1   V5FZ23   A0A2J7QXS1   A0A232EWT9   A0A0L0CMN5   K7J2H9   A0A3L8DY70   A0A026W146   A0A2P8XRX2   A0A1I8NQK3   F4X2C2   E9ILF9   A0A195D5E8   E2ARR8   A0A1B6MQ43   A0A195EJR6   A0A151HZU0   A0A158NJN5   A0A195FMB2   A0A151X6D0   E2B926   D6WQL0   A0A1B6K2F1   A0A1B6K7E5   A0A2G8JTG3   A0A1B6GV47   A0A2A3EP52   A0A1B6CSI6   A0A2A3EPR5   A0A1Y1LJK2   A0A087ZTU4   N6TD45   A0A0N0U3U9   T1GDR3   A0A1B0AGX4   A0A1A9UFB4   A0A310SFQ9   A0A1A9YKI7   A0A1B0FDR4   A0A0L7RBU4   A0A154PLZ1   A0A1B0B6E4   Q7K486   B4QCA6   B4HNK1   B4P4Q0   B3NLR1   A0A1U8CMW1   A0A1J1I829   A0A1A9W848   F5H6J3   A0A1U7RFK2   B4KMN9   A0A0M3QVL1   A0A3B3SDC3   A0A3P8XYL0   Q8BNU0-2   A0A1S3M0F4   A0A2T7PWP5   A0A3Q3NG50   Q8BNU0   A0A1L8DBE1   A0A1L8DB00   T1PD27   F7CMX9   A0A2J8LSV1   A0A2K6PYQ0   A0A2K6PYR1   B4NN26  

Pubmed

19121390    26227816    22118469    26354079    24845553    28648823    + More
26108605    20075255    30249741    24508170    29403074    21719571    21282665    20798317    21347285    18362917    19820115    29023486    28004739    23537049    10731132    12537572    12537569    18327897    17994087    22936249    17550304    15057824    21269460    29240929    25069045    16141072    15489334    21183079    17495919    25362486   

EMBL

BABH01025560    NWSH01005581    PCG64119.1    ODYU01004446    SOQ44322.1    RSAL01000240    + More
RVE43679.1    JTDY01001770    KOB72932.1    AGBW02009696    OWR50093.1    AGBW02012535    OWR44876.1    KQ459602    KPI93217.1    KK852504    KDR22506.1    LJIG01022693    KRT79212.1    GALX01005541    JAB62925.1    NEVH01009372    PNF33378.1    NNAY01001821    OXU22819.1    JRES01000173    KNC33613.1    QOIP01000003    RLU25296.1    KK107499    EZA49787.1    PYGN01001452    PSN34753.1    GL888575    EGI59404.1    GL764076    EFZ18598.1    KQ976818    KYN08108.1    GL442166    EFN63876.1    GEBQ01001966    JAT38011.1    KQ978782    KYN28386.1    KQ976666    KYM78289.1    ADTU01018086    ADTU01018087    KQ981424    KYN41825.1    KQ982482    KYQ55941.1    GL446425    EFN87792.1    KQ971354    EFA06986.1    GECU01019057    GECU01002074    JAS88649.1    JAT05633.1    GECU01000573    JAT07134.1    MRZV01001280    PIK39067.1    GECZ01003449    JAS66320.1    KZ288207    PBC33032.1    GEDC01021095    GEDC01011612    JAS16203.1    JAS25686.1    PBC33031.1    GEZM01058338    JAV71766.1    APGK01035311    KB740923    KB632333    ENN78264.1    ERL92695.1    KQ435851    KOX70802.1    CAQQ02028778    CAQQ02028779    CAQQ02028780    CAQQ02028781    KQ768636    OAD53079.1    CCAG010000540    KQ414617    KOC68226.1    KQ434977    KZC12895.1    JXJN01009060    AE013599    AY052110    CM000362    CM002911    EDX07630.1    KMY94789.1    CH480816    EDW48420.1    CM000158    EDW91673.1    CH954179    EDV55036.1    CVRI01000043    CRK96437.1    AC003038    AC004447    CH933808    EDW08781.1    CP012524    ALC42583.1    AK010815    AK049351    AK080609    AK081550    BC005754    BC030077    BC043070    BC055779    PZQS01000001    PVD37810.1    GFDF01010440    JAV03644.1    GFDF01010529    JAV03555.1    KA646010    AFP60639.1    NBAG03000278    PNI50352.1    CH964282    EDW85765.1   

Proteomes

UP000005204    UP000218220    UP000283053    UP000037510    UP000007151    UP000053268    + More
UP000027135    UP000235965    UP000215335    UP000037069    UP000002358    UP000279307    UP000053097    UP000245037    UP000095300    UP000007755    UP000078542    UP000000311    UP000078492    UP000078540    UP000005205    UP000078541    UP000075809    UP000008237    UP000007266    UP000230750    UP000242457    UP000005203    UP000019118    UP000030742    UP000053105    UP000015102    UP000092445    UP000078200    UP000092443    UP000092444    UP000053825    UP000076502    UP000092460    UP000000803    UP000000304    UP000001292    UP000002282    UP000008711    UP000189706    UP000183832    UP000091820    UP000005640    UP000009192    UP000092553    UP000261540    UP000265140    UP000000589    UP000087266    UP000245119    UP000261660    UP000002280    UP000233200    UP000007798   

PRIDE

H9JW30    Q7K486    F5H6J3    Q8BNU0   

Pfam

PF00514   Arm

Interpro

IPR016024   ARM-type_fold        + More
IPR011989   ARM-like       
IPR040104   ARMC6       
IPR000225   Armadillo       

SUPFAM

SSF48371   SSF48371       

Gene 3D

1.25.10.10    

ProteinModelPortal

H9JW30   A0A2A4IWS7   A0A2H1VV26   A0A3S2LST3   A0A0L7LBQ8   A0A212F8Q1   + More
A0A212ETR1   A0A194PIS0   A0A067RF47   A0A0T6AVQ1   V5FZ23   A0A2J7QXS1   A0A232EWT9   A0A0L0CMN5   K7J2H9   A0A3L8DY70   A0A026W146   A0A2P8XRX2   A0A1I8NQK3   F4X2C2   E9ILF9   A0A195D5E8   E2ARR8   A0A1B6MQ43   A0A195EJR6   A0A151HZU0   A0A158NJN5   A0A195FMB2   A0A151X6D0   E2B926   D6WQL0   A0A1B6K2F1   A0A1B6K7E5   A0A2G8JTG3   A0A1B6GV47   A0A2A3EP52   A0A1B6CSI6   A0A2A3EPR5   A0A1Y1LJK2   A0A087ZTU4   N6TD45   A0A0N0U3U9   T1GDR3   A0A1B0AGX4   A0A1A9UFB4   A0A310SFQ9   A0A1A9YKI7   A0A1B0FDR4   A0A0L7RBU4   A0A154PLZ1   A0A1B0B6E4   Q7K486   B4QCA6   B4HNK1   B4P4Q0   B3NLR1   A0A1U8CMW1   A0A1J1I829   A0A1A9W848   F5H6J3   A0A1U7RFK2   B4KMN9   A0A0M3QVL1   A0A3B3SDC3   A0A3P8XYL0   Q8BNU0-2   A0A1S3M0F4   A0A2T7PWP5   A0A3Q3NG50   Q8BNU0   A0A1L8DBE1   A0A1L8DB00   T1PD27   F7CMX9   A0A2J8LSV1   A0A2K6PYQ0   A0A2K6PYR1   B4NN26  

KEGG

101737428    no KO assigned | (RefSeq) armadillo repeat-containing protein 6 homolog

GO

GO:0002244   GO:0005829  

PANTHER

PTHR22895:SF0  

Length:

76

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00179

Exp number, first 60 AAs:

0.00165

Total prob of N-in:

0.15454

outside

1  -  76

 

 

Pi

33.057307

Theta

228.970701

Tajima's D

1.549071

CLR

0.000103

CSRT

0.800509974501275

Interpretation

Uncertain