Silkworm Genome Informatics Database

Gene

KWMTBOMO16368

Annotation

AF461149_1_transposase_[Bombyx_mori]

Location

Bomo_Chr28(+):7356483-7357823 View in EpiBrowser

Location in the cell

Mitochondrial Reliability : 2.552

CDS

ATGGAGTGGACGCTTAAAGAAGACCGTGTTGCAGTTATTGCGTTGCATCGTTGCGGTTACGCGCCATTTAAAATTTTTAACATACTGAAAAATTTGAATATAACCAAAAGATTCGCTTATCGTACCATCAAACGATACAATGAAGACTCTAGTGCAGATGACAGGTCAAGAAGTGGTCGCCCTCGGTCTGTTAGGACTCCAGCAGTGATAAAAGCTGTGAAGGTGCGAATTCAAAGAAATCCCAAACCTCATAGAGCGAAGAGCACACAAGACTGGCTGGTGGCGCGTGAAATCGACTTCATGCGGCACGAAGACTGGCCCTCCTCCAGTCCAGATTTGAATCCGTTAGATTACAAGATATGGCAACACTTAGAGGAAAAGGCGCGCTCAAAGCCTCATCCCAATTTGGAGTCACTCAAGACATCTTTGATTAAGGCAGCCGCCGATATTGACATGGACCTCGTTCGTGCTGCGATAGACGACTGGCTGCGCAGATTGAAGGCCTGTATTCAAAATCACGGAGGTCATTTTGAATAA

Protein

MEWTLKEDRVAVIALHRCGYAPFKIFNILKNLNITKRFAYRTIKRYNEDSSADDRSRSGRPRSVRTPAVIKAVKVRIQRNPKPHRAKSTQDWLVAREIDFMRHEDWPSSSPDLNPLDYKIWQHLEEKARSKPHPNLESLKTSLIKAAADIDMDLVRAAIDDWLRRLKACIQNHGGHFE

Uniprot

A0A0N4Y9Q8 A0A1I7RIM5 A0A0N4XI93 A0A0N4YHH1 A0A1I7TCP6 A0A0N4X1V3 + More

Pubmed

21909270

EMBL

UYSL01020934 VDL76658.1 UYSL01002425 VDL65835.1 UYSL01022144 VDL79905.1 + More
UZAF01020477 VDO70271.1

Proteomes

UP000038043 UP000271162 UP000095284 UP000095282 UP000038042 UP000268014 + More

Pfam

PF13358 DDE_3

Interpro

IPR009057   Homeobox-like_sf        + More
IPR038717   Tc1-like_DDE_dom
IPR036388   WH-like_DNA-bd_sf

SUPFAM

SSF46689 SSF46689

Gene 3D

1.10.10.10

ProteinModelPortal

A0A0N4Y9Q8 A0A1I7RIM5 A0A0N4XI93 A0A0N4YHH1 A0A1I7TCP6 A0A0N4X1V3 + More

PDB

5CR4 E-value=0.00103972, Score=95

KEGG

101740752 no KO assigned | (RefSeq) aldo-keto reductase AKR2E4-like

GO

GO:0003677 GO:0006508 GO:0005840 GO:0006412 GO:0033557 GO:0005839 GO:0051603 GO:0046835 GO:0006281 GO:0006259

Length:

178

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

1.05819

Exp number, first 60 AAs:

1.05819

Total prob of N-in:

0.18393

outside

1 - 178

Pi

78.21155

Theta

49.527895

Tajima's D

1.988066

CLR

0.038354

CSRT

0.88145592720364

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics

Multiple alignment of Orthologues

Gene Tree