SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO16364
Pre Gene Modal
BGIBMGA013750
Annotation
PREDICTED:_MTSS1-like_protein_[Amyelois_transitella]
Location in the cell
Nuclear   Reliability : 4.474
 

Sequence

CDS
ATGAAGACTTTCATCAGTGCTCTTATGGAGACCATGATAACACCGCTGTCTGAACGCGCGGATGATTGGCGGCGCGGCGGCAGCGCCACGGGTGCCCTGAGCCGCGATCACGCGAGGGAATGTAAACGCGCTCGAGCAGAACTCAGGAGGAGGATGACGGAAGCGCAGCGCCACGCCAGGAAAGCCAGGAGAGCACCGCCCGACGCTAAACGAAGGGCCGACGTTTGCATGCAGGACGTTCAAGAACGCAAGCAGCAATTGGAAGAAATGGAAGAGAAGGCTGTTAAGGCAGCCTTGATCGAGGAACGGAGCCGCTTCTGTCACTTCGTGTCGCTGCTCAACCCTGTGGTGGAGTGTGAAGTGGCAATGCTAGCGGAGCTCGGTCACCTTCAAGAGGGAAACGATCAGCTAATACGACACACCGCCGAACCGAGAACCTTGCCGGCGGCTAGTTTACAAGTTATTTGCGACGTCAAGTCGTGTGCGAGCGGCTGGGAGTGCCAGTCGGCCCCTCACTCGCCCTCCTCGTCCCGTCTCGGCAGCCGCAAGTCGAGCCTCACGTCTATCTCGTCACTAAACAGTCACTGCTCCGAACATCACGGCGTCTCAGGATCGACGGTGAGCTGTTCCACCCCGATATCCAATGCGTCGTCCGGTACAATGCCCGGACACAACAACAGCGATCAGCTGTCCCAGTCGACGGCACGTTTGTCGAGCGTGTGCAGCGCCGACTCCGGATTCCGTTCACAGGACGCTTTACAACGACGCTCGCTCTACGTCGACAATGGATCTGACAATCAAAGCGTTAGCAGCGAGTGTCTGACGCCGGCGAAGGGCGCTCTGGAAGATGAAGACAAGGACGACAGCACACACGATGTCGCCAATGCAGCCTCGGCGACGTGGCCGGATCTAAAGGACACGGCGCAGTTTGAGCGAGCCGCCTCCGCCATCATGGGGGGTCGACCCCACACCATATCAGCCGCCTACGAAAGGAACCATCCTCGTCCCGCTCTCAGCGTACACACGTTCTCCTCGGACGCCGAGCAGAGGGAAGGCGGTATTTATGCTCGCCCACCGTTGCCCACTAGATGTTCGTCCTTGGAGCGACCCAGCGTGCCGGTCAAGCTGATCAACGCGAACTCTCCGCAGCAGGACTTCAAGCACAACAAGCCTTCGTCGCTACCGCCGCACCTCACTAAGGAGATGCCGCAAGCAGTCTACGTGAACATGTCGGAGCTGGCTTCGCTGGCCGCCTCCCGCGCCCACGCCCTCAGCGAGCAGCCGCACCAGGAGAAGGTGTGTTCAGAGAGCAGTGCTAGCGAATCGTCTTTAGAGTCGTCAAGCGGCTACGGAAGTCAAGGAGCCTTCGCTGCCGAAGACCTCACAATTCAGCATCAAGTCCAGCACGCAGACGTCGATTCTGAGATCGTAACGCTGCGTCGCGCCACTGAAGCTTCCGTAGCGGCCGCGCGCGAGAGCTTTTCGATATCCCTCGGGAGTCTCGAGGAGGCGGTGAGGTCGCTCGACGCGGCCTGCGACTCTCCCCCCTTCGCCACCATCGGGAAGAAACCCGCCGTGCCCAAGCGGCGGCCCCTGTCAATGACAGCGACGGTGTGGTCGAGGCGTGGTTCCTCCAGCTCGCTCGGGAAGCCGCCGCCCCCAGTGCGCCGGTCCTCCTCCATATCGCGACCTCAACGACCGGCCTATGGACAGACAAATACCCAGAGCCCCCCGATGGGGCCGACCGACGCCGACAACCTTCCGCCGCCACCGGCTTTCTTATTGCAACCTGACGGCGAAACTAATCATGCACAGCAACCCACCAACGTCGCGGAGACCGTGAAGCAACTGACCGAGTTGAAGCACACGCCTGCTTCTCCTGGTCTGGTGCGTCGTAGCGTCCAACAGCTAAACTCCACGACCTCGCCCGCCCAGACCGCGCTCTCCCTCAGCACGTTCCAGCAGGCCAAGACCGGCTTCTCATCGACGGTCAACGTCAGCAACACTGGGAACCTGAACCCAATCTACGGACAGACCGGCCACCGGATCATGACTTACGTGGAGAACTCAGCGCACGCGAGGAAGACAAGCATGTCCGGTTCCAACTCTGATATCTTCAAGGAAGCTAATATTGGTCCAATGTTCACGGAGGGCCGAAGCTCCCCGCAGGGCTCCACGCCCTCGACCCCGAGCCACAGCGACAACTCGCTGTCGAGCTTCGGGCTCCGGACCACCAGCGAATCTCACTACGGACAGACCGGCTTCAAGCTGCAGCAAGAGAAGAAATACGGTCAGAGCAACAGCATATACGCGCAGCCGTCGCAGCTAATGGGCGGCTACAACAACCCGCGCCTCGACACCAGCCCGCTCGCGCTGCGGCGCGGCATCGCGGCGCGCTCGCACAGCGCCGACACGCAGCGGACCAGCGCAGGTTAG
Protein
MKTFISALMETMITPLSERADDWRRGGSATGALSRDHARECKRARAELRRRMTEAQRHARKARRAPPDAKRRADVCMQDVQERKQQLEEMEEKAVKAALIEERSRFCHFVSLLNPVVECEVAMLAELGHLQEGNDQLIRHTAEPRTLPAASLQVICDVKSCASGWECQSAPHSPSSSRLGSRKSSLTSISSLNSHCSEHHGVSGSTVSCSTPISNASSGTMPGHNNSDQLSQSTARLSSVCSADSGFRSQDALQRRSLYVDNGSDNQSVSSECLTPAKGALEDEDKDDSTHDVANAASATWPDLKDTAQFERAASAIMGGRPHTISAAYERNHPRPALSVHTFSSDAEQREGGIYARPPLPTRCSSLERPSVPVKLINANSPQQDFKHNKPSSLPPHLTKEMPQAVYVNMSELASLAASRAHALSEQPHQEKVCSESSASESSLESSSGYGSQGAFAAEDLTIQHQVQHADVDSEIVTLRRATEASVAAARESFSISLGSLEEAVRSLDAACDSPPFATIGKKPAVPKRRPLSMTATVWSRRGSSSSLGKPPPPVRRSSSISRPQRPAYGQTNTQSPPMGPTDADNLPPPPAFLLQPDGETNHAQQPTNVAETVKQLTELKHTPASPGLVRRSVQQLNSTTSPAQTALSLSTFQQAKTGFSSTVNVSNTGNLNPIYGQTGHRIMTYVENSAHARKTSMSGSNSDIFKEANIGPMFTEGRSSPQGSTPSTPSHSDNSLSSFGLRTTSESHYGQTGFKLQQEKKYGQSNSIYAQPSQLMGGYNNPRLDTSPLALRRGIAARSHSADTQRTSAG

Summary

Pfam
PF08397   IMD
Interpro
IPR027267   AH/BAR_dom_sf        + More
IPR030127   MTSS1/MTSS2       
IPR013606   I-BAR_dom       
IPR027682   MTSS1       
SUPFAM
SSF103657   SSF103657       
Gene 3D
PDB
2D1L     E-value=5.39539e-24,     Score=278

Ontologies

Topology

Length:
811
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00145
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00009
outside
1  -  811
 
 

Population Genetic Test Statistics

Pi
248.080154
Theta
165.893928
Tajima's D
1.860716
CLR
0.24034
CSRT
0.856807159642018
Interpretation
Uncertain
Copyright@ 2018-2023    Any Comments and suggestions mail to:zhuzl@cqu.edu.cn   渝ICP备19006517号

渝公网安备 50010602502065号