Silkworm Genome Informatics Database

Gene

KWMTBOMO16363

Pre Gene Modal

BGIBMGA013750

Annotation

hypothetical_protein_RR46_01504_[Papilio_xuthus]

Location

Bomo_Chr28(-):7260442-7269632 View in EpiBrowser

Location in the cell

Nuclear Reliability : 3.008

CDS

ATGTTTCCTAAGCGTTGTTTGTTGTCGGCAGAGGGCGGGCTGATCGCGAGTCTGAGCGCGAAGCTGGCGCCGCAGCTGTCTCCCCGCGCCCCGCGCCGCACGGACCCCGCTAAAGGGAAAGGTACAGTGCCAAGTGCCGTGCAGCCGGCGTTCTTGGACAAGCTCTCGGCGACGATACAGCAACAACGAAGACAATTGAACTCGACCCGAGCCAGCAATGTACGCGATATTATCAACGCACACGCGCAGCCCGATCCGAGGGTGTGCCACACGTCTCTGATGGAGCAGATCAAACGAGGAGCGACCCTGCGTCGGAACAAGCACTGCAACGACAGATCAGCACCGAAAATACGCTAA

Protein

MFPKRCLLSAEGGLIASLSAKLAPQLSPRAPRRTDPAKGKGTVPSAVQPAFLDKLSATIQQQRRQLNSTRASNVRDIINAHAQPDPRVCHTSLMEQIKRGATLRRNKHCNDRSAPKIR

Uniprot

A0A0N1IB21 A0A2H1WU30 A0A0N0PBJ0 A0A3S2TPM9 A0A2A4JXU9 U4U350 + More
A0A139WED8 A0A139WEG9 N6SSK9 D6WQ04 A0A1Y1KH05 A0A1Y1KHF1 A0A0T6B237 A0A1B6CYE7 A0A1B6D8A5 A0A182TB79 A7UTQ6 Q7PIS3

Pubmed

26354079 23537049 18362917 19820115 28004739 12364791 + More
14747013 17210077

EMBL

KQ459547 KPJ00027.1 ODYU01011015 SOQ56492.1 KQ460936 KPJ10701.1 + More
RSAL01000029 RVE51739.1 NWSH01000467 PCG76212.1 KB631652 ERL85026.1 KQ971354 KYB26313.1 KYB26312.1 APGK01058293 APGK01058294 KB741288 ENN70649.1 EFA06149.2 GEZM01086226 JAV59661.1 GEZM01086227 JAV59660.1 LJIG01016160 KRT81434.1 GEDC01018880 JAS18418.1 GEDC01015374 JAS21924.1 AAAB01008960 EDO63679.1 EAA44036.3

Proteomes

UP000053268 UP000053240 UP000283053 UP000218220 UP000030742 UP000007266 + More
UP000019118 UP000075901 UP000007062

Pfam

PF08397 IMD + More
PF10545 MADF_DNA_bdg

Interpro

IPR027267   AH/BAR_dom_sf        + More
IPR013606   I-BAR_dom
IPR030127   MTSS1/MTSS2
IPR027682   MTSS1
IPR006578   MADF-dom
IPR003124   WH2_dom

SUPFAM

SSF103657 SSF103657

Gene 3D

1.20.1270.60

ProteinModelPortal

A0A0N1IB21 A0A2H1WU30 A0A0N0PBJ0 A0A3S2TPM9 A0A2A4JXU9 U4U350 + More
A0A139WED8 A0A139WEG9 N6SSK9 D6WQ04 A0A1Y1KH05 A0A1Y1KHF1 A0A0T6B237 A0A1B6CYE7 A0A1B6D8A5 A0A182TB79 A7UTQ6 Q7PIS3

KEGG

101736700 no KO assigned | (RefSeq) uncharacterized LOC101736700

GO

GO:0007009 GO:0003779

PANTHER

PTHR15708 PTHR15708:SF10

Length:

118

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.01495

Exp number, first 60 AAs:

0.01495

Total prob of N-in:

0.12273

outside

1 - 118

Pi

274.895002

Theta

185.411463

Tajima's D

2.108795

CLR

0.110893

CSRT

0.899555022248888

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics