Gene

KWMTBOMO16350

Annotation

PREDICTED:_zinc_finger_BED_domain-containing_protein_1-like_[Amyelois_transitella]

Location

Bomo_Chr28(+):6171512-6173635      View in EpiBrowser

Transcription factor

zf-BED

Location in the cell

Nuclear   Reliability : 2.725

CDS

ATGGGACCTAAGAAAAAAAGTTCCGTTTGGCAGTTCTTTAACAAAATTGACGATAAGAAAACGAAATGCAAACTATGTCAAAAGGAAATTAAGTCTGCTGGAAACACTACGAACTTAATTGGACATATTCGTAATGTTCATAAGGCTGCTTATCTCGAAATTCAGCCGAAACAAACTACATTCAATGCAGTAACTACTACAGACGAAATATCGAATCCTCTGGATCTGGATACCAAAGTTACGCCTTATAATAAAATGGATGATGGAGTACTTCAGTTTCAACCTGTTCCAAGTTGTAGTGGCAGTCAAAGATCCGGTGCACCGTTACCAAAAACCGTAAATGAAACCATTGATTCAGACTTAGACGAAAACGTTACACCTTTAAAACGCCAAAGAACAATACAGGCCGCTTTTAAAGATATTTCCTCTTACTCAGAATCTGGAGCGAAGACAAGGAAACTGAACAACTGTTTGTTATTCATGATTTGCAAAGACCATCAGTCATTCTCAATCGTTGAAAACGAAGGCTTCAAAACTCTAATGAAAACAGTTGCTCCTCAATATAAGCTCCCGAGTAGAACAACTCTAAGACGCTGGCTGGACGATAAATATGAAGTAATTTCAGAAACAATTAAGAAAATGTTGTCCTCTATAGAAGATATAACCCTAACAACAGATATTTGGTCGGATACCTTGAATATGAAAAGTTTTTTGGGCATCACAGCACATTTCGGAATAGACATTGAACTATATTCAGTCACCTTAGGTGTGTACGAATTGGATGAAAGACATACATCAGATTATCTTTCTGAAATTCTCTTAAAGGTATGTCAAGACTGGAAAATCGATCAAGAGAATGTAACAGCTGTTGTTACTGACAACGCAGCCAATATAGTTAAGGCGATCGAATTAGCGTTTGGTAGAAGGAAACACATCCCATGTTTTGCCCATACTCTGAATTTGGTGGCTGAAGGCACAATGATATGTATTGAGTGGAGAAACATTGTTTCTAAAGTAAAATCAATAGTGACTTGGTTTAAACAGAGTTGCATTGCTAGTGATGAATTACGTAAAGCTACTGCTGCGGCTACGGAGTCTTCTGCTGGAGCAGCTGAGGTAAAATTAATACAAAGCGTCGATACTCGCTGGAACAGTACATATTATATGTTACAAAGATTTCTAGAACTCCGTAGTGTCATAAATGATATTCTCTTCCGCCACCCTAGAGCACCTGCAATGCTGAGTGCATCGGAAATATCTACTGTATCGTCTGTCATCATGGTATTGCGACCCTTAGAAGCGGCTACAAAAGAAATTTCAGGTGATAAATACTGCACAAGTAGTAAAATTATTCCCTTAGTTCGTTGCATGCTCTCTAAAATAACTTCAGCTGTTATAGAAGATCCCGTAGCGAAAGAGGTGCAGAAACTTGCTATTAATGAAATAAATAAAAGAATGGGTTCAATAGAACATGTGAATGCTCTGGCTATCGCAAGTATTTTAGATCCACGGTTTAAAAGAATGCATTTCAATGATCCGATAGCTTGTTCGAATGCTGTTACGAAAATTAAAGATTTAATGAAGAAGAATTTGCATAGCAATGAAGAACCTGAGTCCGATTCTGACAAGTCCGATAAAAATGAAGAGGCCTTTTCATTATGGACTGATCACCATAAGTTAGTGCATCGTAACTGGAAAATTAACAAATCTGAAGACGTTTTGTCTGACGAACTTTCCGTTTATCTCCGAACTCCTGTTGGAAGACTTAAAGAAAATCCGTTAGAAATTTGGAGAGATTACAAAATACAATTCCCGAAGCTGTACAAAATAGCTTTTAAGTATTTAACAATAGTTGGCACGTCAGTCCCTTCAGAAAGACTTTTGTCACAGGCAGGGCTAGTTATGACTGAACAAAGAAACCGGCTGAAGGGGAAGAGATTAAGCAAACTTTTGTTTTTACATAGCATTGACAAAAAATATTGGAATATGTAA

Protein

MGPKKKSSVWQFFNKIDDKKTKCKLCQKEIKSAGNTTNLIGHIRNVHKAAYLEIQPKQTTFNAVTTTDEISNPLDLDTKVTPYNKMDDGVLQFQPVPSCSGSQRSGAPLPKTVNETIDSDLDENVTPLKRQRTIQAAFKDISSYSESGAKTRKLNNCLLFMICKDHQSFSIVENEGFKTLMKTVAPQYKLPSRTTLRRWLDDKYEVISETIKKMLSSIEDITLTTDIWSDTLNMKSFLGITAHFGIDIELYSVTLGVYELDERHTSDYLSEILLKVCQDWKIDQENVTAVVTDNAANIVKAIELAFGRRKHIPCFAHTLNLVAEGTMICIEWRNIVSKVKSIVTWFKQSCIASDELRKATAAATESSAGAAEVKLIQSVDTRWNSTYYMLQRFLELRSVINDILFRHPRAPAMLSASEISTVSSVIMVLRPLEAATKEISGDKYCTSSKIIPLVRCMLSKITSAVIEDPVAKEVQKLAINEINKRMGSIEHVNALAIASILDPRFKRMHFNDPIACSNAVTKIKDLMKKNLHSNEEPESDSDKSDKNEEAFSLWTDHHKLVHRNWKINKSEDVLSDELSVYLRTPVGRLKENPLEIWRDYKIQFPKLYKIAFKYLTIVGTSVPSERLLSQAGLVMTEQRNRLKGKRLSKLLFLHSIDKKYWNM

Uniprot

J9LDY8   A0A1E1WN08   J9M7K2   A0A1W4WLZ1   J9M2M5   J9KF88   + More
A0A151J3A2   A0A151IJ50   E2AN53   A0A151IHU3   E2C2R7   J9M5N4   A0A151ICL6   A0A151J8J8   A0A195DX32   J9KNP5   J9L2Y9   A0A0J7K4Y0   A0A151K1W2   A0A151IVN1   A0A2S2QDH1   A0A2S2R3S9   J9LSA5   A0A3L8DVM9   A0A026WKR9   A0A026X0S0   A0A151IK53   J9LFC3   J9LEV9   X1WXE1   J9KS03   Q8T648   J9LVM0   A0A224XKI7   T1JXM7   E2A4Y2   A0A1X7UCW0   A0A2S2QCJ4   X1WTG7   A0A3P8RVY2   J9LS52   A0A158P559   A0A1X7TGY6   J9KBT0   A0A2S2PB02   A0A0J7KSL2   A0A3B3BJP2   A0A1X7UFA9   T1K5U2   A0A2A4JMY2   A0A2A4JLR2   A0A0T6AT01   G3PR68   A0A1X7TEQ5   A0A232EFR6   X1XCD4   A0A1A8AM29   A0A0A1XSV1   J9KJS4   J9LRC3   A0A3B1JJI0   A0A0K2UYR9   A0A3Q3GI05   J9LZV6   J9KQT7   A0A1A8UJB2   A0A3B4XPZ3   J9KN32   X1XTH2   H9JJ46   A0A1X7SRE6   A0A0B7BIP8   K7JPR8   A0A0L7LFD6   J9KDG5  

Pubmed

20798317    30249741    24508170    12733661    29451363    28648823    + More
25830018    25329095    19121390    20075255    26227816   

EMBL

ABLF02010709    GDQN01002674    JAT88380.1    ABLF02008875    ABLF02006015    ABLF02030582    + More
KQ980290    KYN16919.1    KQ977395    KYN02984.1    GL441080    EFN65135.1    KQ977557    KYN02009.1    GL452203    EFN77752.1    ABLF02001734    KQ978037    KYM97822.1    KQ979507    KYN21183.1    KQ980204    KYN17277.1    ABLF02023260    ABLF02009488    LBMM01014067    KMQ85349.1    LKEX01009590    KYN50115.1    KQ980913    KYN11465.1    GGMS01006357    MBY75560.1    GGMS01015207    MBY84410.1    ABLF02017802    QOIP01000003    RLU24471.1    KK107161    EZA56605.1    KK107050    EZA61658.1    KQ977255    KYN04655.1    ABLF02011645    ABLF02044591    ABLF02050984    ABLF02055777    ABLF02018406    ABLF02026056    ABLF02057203    ABLF02030547    AF486809    AAL93203.1    ABLF02006624    ABLF02006626    GFTR01007466    JAW08960.1    CAEY01000832    GL436768    EFN71507.1    GGMS01006230    MBY75433.1    ABLF02011646    ABLF02021118    CAEY01000199    ABLF02014501    GGMR01013943    MBY26562.1    LBMM01003701    KMQ93224.1    CAEY01001590    NWSH01001073    PCG72760.1    PCG72759.1    LJIG01022898    KRT78170.1    NNAY01004948    OXU17200.1    ABLF02067360    HADY01017248    SBP55733.1    GBXI01000181    JAD14111.1    ABLF02013863    ABLF02021063    ABLF02051044    HACA01026053    CDW43414.1    ABLF02030460    ABLF02030462    ABLF02030463    ABLF02018503    ABLF02031891    HAEJ01007957    SBS48414.1    ABLF02012271    ABLF02011642    BABH01040014    HACG01045150    CEK92015.1    AAZX01004655    JTDY01001348    KOB74120.1    ABLF02055338   

Proteomes

UP000007819    UP000192223    UP000078492    UP000078542    UP000000311    UP000008237    + More
UP000036403    UP000279307    UP000053097    UP000015104    UP000007879    UP000265080    UP000261560    UP000218220    UP000007635    UP000215335    UP000018467    UP000261660    UP000261360    UP000005204    UP000002358    UP000037510   

PRIDE

H9JJ46   

Pfam

PF05699   Dimer_Tnp_hAT        + More
PF04937   DUF659
PF02892   zf-BED
PF13843   DDE_Tnp_1_7

Interpro

IPR037220   BED_dom        + More
IPR012337   RNaseH-like_sf       
IPR008906   HATC_C_dom       
IPR007021   DUF659       
IPR036236   Znf_C2H2_sf       
IPR003656   Znf_BED       
IPR029526   PGBD       
IPR038261   GPP34-like_sf       

SUPFAM

SSF140996   SSF140996        + More
SSF53098   SSF53098       
SSF57667   SSF57667       

Gene 3D

1.10.3630.10    

ProteinModelPortal

J9LDY8   A0A1E1WN08   J9M7K2   A0A1W4WLZ1   J9M2M5   J9KF88   + More
A0A151J3A2   A0A151IJ50   E2AN53   A0A151IHU3   E2C2R7   J9M5N4   A0A151ICL6   A0A151J8J8   A0A195DX32   J9KNP5   J9L2Y9   A0A0J7K4Y0   A0A151K1W2   A0A151IVN1   A0A2S2QDH1   A0A2S2R3S9   J9LSA5   A0A3L8DVM9   A0A026WKR9   A0A026X0S0   A0A151IK53   J9LFC3   J9LEV9   X1WXE1   J9KS03   Q8T648   J9LVM0   A0A224XKI7   T1JXM7   E2A4Y2   A0A1X7UCW0   A0A2S2QCJ4   X1WTG7   A0A3P8RVY2   J9LS52   A0A158P559   A0A1X7TGY6   J9KBT0   A0A2S2PB02   A0A0J7KSL2   A0A3B3BJP2   A0A1X7UFA9   T1K5U2   A0A2A4JMY2   A0A2A4JLR2   A0A0T6AT01   G3PR68   A0A1X7TEQ5   A0A232EFR6   X1XCD4   A0A1A8AM29   A0A0A1XSV1   J9KJS4   J9LRC3   A0A3B1JJI0   A0A0K2UYR9   A0A3Q3GI05   J9LZV6   J9KQT7   A0A1A8UJB2   A0A3B4XPZ3   J9KN32   X1XTH2   H9JJ46   A0A1X7SRE6   A0A0B7BIP8   K7JPR8   A0A0L7LFD6   J9KDG5  

PDB

6DX0     E-value=9.01366e-21,     Score=249

KEGG

105842192    no KO assigned | (RefSeq) uncharacterized LOC105842192

GO

GO:0046983   GO:0003677   GO:0016021   GO:0003676   GO:0016055   GO:0033557   GO:0005839   GO:0051603   GO:0046835   GO:0006281   GO:0006259  

Length:

663

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.0385

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00140

outside

1  -  663

 

 

Pi

13.533824

Theta

21.866445

Tajima's D

-0.546399

CLR

168.980754

CSRT

0.228138593070346

Interpretation

Uncertain