Gene

KWMTBOMO16348

Pre Gene Modal

BGIBMGA013755

Annotation

PREDICTED:_lachesin-like_[Bombyx_mori]

Location

Bomo_Chr28(-):6064085-6087322      View in EpiBrowser

Location in the cell

Extracellular   Reliability : 2.124

CDS

ATGGCGGAGAATTTTAGGTGCGTGAGAGCAGACGTAGACACTAACGCCCTTGCGCACTTGTCAGTATCCAGGGAGGAAAAGTTAGACTTTCTTCCCTGTACAGCAGGAGGAAAACCGAACTTTCGGTGTACAGCCCACTACGGAGAAGATAGTGTGGGTTCCTTTCCGTACTTCGAGTACAACGTACCGAGGAATGTGACCACAGTAGTCGGACAGACCGCCTTCCTCCACTGCAGGGTAGAGCAACTAGGGGACAAAGCTGTCAGCTGGATCAGGAAGAGGGATCTCCACATACTCACGGCTGGGATTTTGACTTACACATCCGACCAGAGGTTCCAGGTTATTCGGCCTGAGAAGTCAGAAAATTGGACACTGCAGATTAAATTCCCACAGGAGAGAGACGCCGGGATATACGAGTGCCAAGTCAACACGGAACCAAAGATGTCTTTGGCATTTCAACTTAATGTCGTTGAAGCAAAAGCACACATCCTTGGCCCAGCAGATCTGTACGTTAAGACAGGAAGCTCCCTGTCTTTAACTTGTATCCTAAGTCAAGGCCCACACGATCTGGGAACCATATTTTGGTATAAGGGATCAAACCTAATAGAATATAAGGAAGTCGAGGAGAATGAAGTTGCTGAGGAGCCCAGACTTCATCTTAAAACGGAATGGACGGAGCAGCTCACGTCCAGGTTGAGGATAGACAAGCTAATGCCAGGTGACAGCGGAAACTACAGCTGCGTGCCCACTATGGCGGAAGCAGCTTCTGTGAACGTTCACGTCATAAATGGTGAGCACCCGGCAGCAATGCAGCACGGCAACGCCAACACAGCATCACCGTGTGCTCTATCCGTTAATCTTCTCATCTCCCTATACTGCACTTTAGCCACTATATACACGAACACAATCGATGGGCTTAGATGA

Protein

MAENFRCVRADVDTNALAHLSVSREEKLDFLPCTAGGKPNFRCTAHYGEDSVGSFPYFEYNVPRNVTTVVGQTAFLHCRVEQLGDKAVSWIRKRDLHILTAGILTYTSDQRFQVIRPEKSENWTLQIKFPQERDAGIYECQVNTEPKMSLAFQLNVVEAKAHILGPADLYVKTGSSLSLTCILSQGPHDLGTIFWYKGSNLIEYKEVEENEVAEEPRLHLKTEWTEQLTSRLRIDKLMPGDSGNYSCVPTMAEAASVNVHVINGEHPAAMQHGNANTASPCALSVNLLISLYCTLATIYTNTIDGLR

Uniprot

H9JW42   A0A2W1BIH2   A0A0N1INJ1   A0A2A4JQW8   A0A194PWH4   A0A3S2NDV2   + More
A0A212EK51   A0A0L7LQB4   A0A1W4WKQ1   A0A1Y1KM36   A0A1W4WLN9   A0A1W4WAL7   D6WQC3   K7J3K8   A0A084W7M1   A0A182W7L9   A0A1S4GW35   A0A182INM9   A0A182PJR9   A0A182X1E9   A0A182M5J8   A0A182IED0   A0A182NTF9   A0A182L2P0   A0A182RJE5   A0A182TN06   W8B7U9   A0A084WJD5   A0A1I8N3M9   A0A182LX90   A0A182WB78   A0A182QCK5   A0A0C9QVT6   A0A182F1B0   A0A182NLY3   A0A1I8P141   B3MIS5   A0A182QZZ0   A0A182HPC2   B4PA21   B3NJX6   A0A1W4VI23   Q8T603   A0A182VP11   A0A0J9RH12   A1ZBY3   A0A1J1J206   B4QF47   B4HQN9   B4KQP6   Q7Q9S5   A0A182WB79   B4ME85   A0A2S2QTF8   Q17KF5   A0A3B0JET8   A0A182LB76   A0A182QG71   A0A0R3NN95   A0A2S2NJI4   A0A182NLY2   B4J970   A0A0Q9WWE4   A0A0Q9W0P6   A0A0M4EVA2   B5E168   Q7Q385   A0A182YJ02   A0A182K2P5   A0A182RUE1   W5J871   Q7Q9S4   A0A182YJ03   A0A182PV21   W5J150   A0A182GPY0   A0A182H4P8   A0A182HDE7   A0A182GLY2   B4HWY0   Q179I1   B4P140   A0A0J9R0G7   B4G6Y0   A0A1W4VT51   A0A336KD98   A0A3L8DGK6  

Pubmed

19121390    28756777    26354079    22118469    26227816    28004739    + More
18362917    19820115    20075255    24438588    12364791    20966253    24495485    25315136    17994087    17550304    11978823    30688651    22936249    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    17510324    15632085    25244985    20920257    23761445    26483478    30249741   

EMBL

BABH01025407    BABH01025408    KZ150101    PZC73505.1    KQ461053    KPJ09944.1    + More
NWSH01000852    PCG73843.1    KQ459588    KPI97726.1    RSAL01000180    RVE44935.1    AGBW02014312    OWR41892.1    JTDY01000339    KOB77632.1    GEZM01081402    JAV61648.1    KQ971354    EFA06091.2    ATLV01021267    KE525315    KFB46215.1    AAAB01008964    AXCM01002382    APCN01005201    GAMC01011878    JAB94677.1    ATLV01024017    KE525348    KFB50329.1    AXCM01018170    AXCN02000706    GBYB01007859    JAG77626.1    CH902619    EDV35985.2    AXCN02000954    APCN01002967    CM000158    EDW91352.1    CH954179    EDV55351.1    AF489698    AAM18045.1    CM002911    KMY95323.1    AE013599    BT050529    AAS64909.2    ACJ13236.1    AHN56440.1    CVRI01000063    CRL04889.1    CM000362    EDX07958.1    CH480816    EDW48742.1    CH933808    EDW08215.2    AAAB01008900    EAA09508.4    CH940662    EDW58850.1    GGMS01011730    MBY80933.1    CH477224    EAT47196.1    OUUW01000001    SPP73810.1    CM000071    KRT02370.1    GGMR01004473    MBY17092.1    CH916367    EDW02445.1    CH964282    KRG00316.1    KRF78557.1    CP012524    ALC41520.1    EDY69084.2    EAA12592.4    ADMH02002104    ETN59065.1    EAA09317.4    ADMH02002200    ETN57867.1    JXUM01079533    JXUM01079534    JXUM01079535    KQ563132    KXJ74429.1    JXUM01109976    JXUM01109977    KQ565370    KXJ71043.1    JXUM01034276    JXUM01034277    JXUM01034278    KQ561018    KXJ80015.1    JXUM01073826    JXUM01073827    JXUM01073828    KQ562797    KXJ75108.1    CH480818    EDW52525.1    CH477349    EAT42909.1    CM000157    EDW88015.2    CM002910    KMY89646.1    KMY89648.1    CH479180    EDW28299.1    UFQS01000083    UFQT01000083    SSW99060.1    SSX19442.1    QOIP01000008    RLU19580.1   

Proteomes

UP000005204    UP000053240    UP000218220    UP000053268    UP000283053    UP000007151    + More
UP000037510    UP000192223    UP000007266    UP000002358    UP000030765    UP000075920    UP000075880    UP000075885    UP000076407    UP000075883    UP000075840    UP000075884    UP000075882    UP000075900    UP000075902    UP000095301    UP000075886    UP000069272    UP000095300    UP000007801    UP000002282    UP000008711    UP000192221    UP000075903    UP000000803    UP000183832    UP000000304    UP000001292    UP000009192    UP000007062    UP000008792    UP000008820    UP000268350    UP000001819    UP000001070    UP000007798    UP000092553    UP000076408    UP000075881    UP000000673    UP000069940    UP000249989    UP000008744    UP000279307   

PRIDE

H9JW42    Q8T603   

Pfam

PF07679   I-set        + More
PF07686   V-set

Interpro

IPR013098   Ig_I-set        + More
IPR037448   Zig-8       
IPR013783   Ig-like_fold       
IPR007110   Ig-like_dom       
IPR003599   Ig_sub       
IPR036179   Ig-like_dom_sf       
IPR003598   Ig_sub2       
IPR013106   Ig_V-set       

SUPFAM

SSF48726   SSF48726       

Gene 3D

2.60.40.10    

ProteinModelPortal

H9JW42   A0A2W1BIH2   A0A0N1INJ1   A0A2A4JQW8   A0A194PWH4   A0A3S2NDV2   + More
A0A212EK51   A0A0L7LQB4   A0A1W4WKQ1   A0A1Y1KM36   A0A1W4WLN9   A0A1W4WAL7   D6WQC3   K7J3K8   A0A084W7M1   A0A182W7L9   A0A1S4GW35   A0A182INM9   A0A182PJR9   A0A182X1E9   A0A182M5J8   A0A182IED0   A0A182NTF9   A0A182L2P0   A0A182RJE5   A0A182TN06   W8B7U9   A0A084WJD5   A0A1I8N3M9   A0A182LX90   A0A182WB78   A0A182QCK5   A0A0C9QVT6   A0A182F1B0   A0A182NLY3   A0A1I8P141   B3MIS5   A0A182QZZ0   A0A182HPC2   B4PA21   B3NJX6   A0A1W4VI23   Q8T603   A0A182VP11   A0A0J9RH12   A1ZBY3   A0A1J1J206   B4QF47   B4HQN9   B4KQP6   Q7Q9S5   A0A182WB79   B4ME85   A0A2S2QTF8   Q17KF5   A0A3B0JET8   A0A182LB76   A0A182QG71   A0A0R3NN95   A0A2S2NJI4   A0A182NLY2   B4J970   A0A0Q9WWE4   A0A0Q9W0P6   A0A0M4EVA2   B5E168   Q7Q385   A0A182YJ02   A0A182K2P5   A0A182RUE1   W5J871   Q7Q9S4   A0A182YJ03   A0A182PV21   W5J150   A0A182GPY0   A0A182H4P8   A0A182HDE7   A0A182GLY2   B4HWY0   Q179I1   B4P140   A0A0J9R0G7   B4G6Y0   A0A1W4VT51   A0A336KD98   A0A3L8DGK6  

PDB

6EG1     E-value=1.71519e-63,     Score=614

KEGG

101739493    no KO assigned | (RefSeq) lachesin-like

GO

GO:0016021   GO:0016301   GO:0032589   GO:0050808   GO:0005886   GO:0035199   GO:0050914   GO:0005887   GO:0005515   GO:0016810   GO:0003824   GO:0016055   GO:0033557   GO:0005839   GO:0051603   GO:0046835   GO:0006281   GO:0006259  

PANTHER

PTHR23279  

Length:

307

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

7.63441

Exp number, first 60 AAs:

1e-05

Total prob of N-in:

0.35437

outside

1  -  307

 

 

Pi

210.110703

Theta

183.278133

Tajima's D

0.798524

CLR

0.267677

CSRT

0.597170141492925

Interpretation

Uncertain