SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO16344
Pre Gene Modal
BGIBMGA013758
Annotation
PREDICTED:_uncharacterized_protein_LOC106110594_[Papilio_polytes]
Location in the cell
PlasmaMembrane   Reliability : 3.02
 

Sequence

CDS
ATGAAGATTTTATTGTTATTCATAGTCATTGTAGTAAATGTGGTGACAGGAGATTTGCCGTTGGCTTTGTCTTGTGAGGCAGAGAAATGTGAGCTACCTGAATGCCGTTGCTCCTCAACCAGTATACCTGGAGGACTGGCAGCTAAGGAAACTCCACAGTTCTTCACGATAACATTCGACGATGCCATTAACGTAATGAATTTGGTTACGTACCGAGATATTCTCTATAACCGTCACAACACAAACGGCTGCAGAGCGGGTGCCACGTTCTACATCAACCATGAATACACAAACTACAATGCGGTCAATGAATTGTACAACGAAGGCTTTGAAATCGCCTTACACACTATCAGCCATAGAACTCCACAGACTTACTGGGCTGAAGCCACTTATGATACTATGGTCCAAGAGCTGGTAGATCAGAGAGTCTTGATGGCGCATTTTGCTAATATACCATATGATGAAATGAAAGGAGTACGTATGCCATTCTTGCAAATGACAGGAAATTCCAGTTTTCAAGTTATGGCCGATTTCGGAATTATCTACGATGCTACTTGGCCTACAGTGACTTCTCTGAGTCCTGGTCTATGGCCGTACACTCTTCATTACGCTTCAACTCAAGAATGTGTGATACCTCCCTGCCCAACCGCTTCTATTCCGGGACCCTGGGTAATGCCTATGATCAGCTGGTTGGATCAAAATGGTATCCCTTGTCCGATGGTTGATAGTTGTTTTTTTGTGCCAAAATTAGACAATGAGGACGAATGGTATGATTTCATCTTGATTAACTTTGAAAGACACTACCTCGGAAACAGGGCTCCATTTGGCTTCTACATTCATGAATGGTACTTAAGATTCAATCCAGCAGTGAAAAGGGCCTTAGCCAGATTTATGGATCTAATCAATAGCTTAAATGATGTTTTCATGGTCAATTCCATTGAAGTTATCGAATGGGTTAAGAATCCTATGCCGATAGACGAATATCGTCGGAAGCCATGCAAAGTTACTAAAAAAACAAATTGCACTCGCCTAACATGTGGCCCTTTAAGAAGTGACCATAATAACCTCGACTACTGGATGGAATCTTGCACGTCGTGTCCTCGAACCTATCCCTGGGTAGGGAACCCACTTGGACAGTAA
Protein
MKILLLFIVIVVNVVTGDLPLALSCEAEKCELPECRCSSTSIPGGLAAKETPQFFTITFDDAINVMNLVTYRDILYNRHNTNGCRAGATFYINHEYTNYNAVNELYNEGFEIALHTISHRTPQTYWAEATYDTMVQELVDQRVLMAHFANIPYDEMKGVRMPFLQMTGNSSFQVMADFGIIYDATWPTVTSLSPGLWPYTLHYASTQECVIPPCPTASIPGPWVMPMISWLDQNGIPCPMVDSCFFVPKLDNEDEWYDFILINFERHYLGNRAPFGFYIHEWYLRFNPAVKRALARFMDLINSLNDVFMVNSIEVIEWVKNPMPIDEYRRKPCKVTKKTNCTRLTCGPLRSDHNNLDYWMESCTSCPRTYPWVGNPLGQ

Summary

EMBL
BABH01025381    KQ459588    KPI97727.1    NWSH01002064    PCG69266.1    EF600051    + More
ABU98616.1    GQ411190    ADB43611.1    KZ150137    PZC72970.1    GQ411191    ADB43612.1    EU325545    ACB54935.1    PCG69265.1    HM357864    AEA76330.1    GDQN01005164    JAT85890.1    KQ461053    KPJ09940.1    PZC72971.1    EU660852    ACD37362.1    KPI97728.1    KR363154    AMY98414.1    ODYU01010231    SOQ55207.1    BABH01025382    HQ680621    AEI30869.1    AY966402    AAY46199.1    KP744648    AKD49099.1    AGBW02010886    OWR47572.1    KP159288    AKO73677.1    JTDY01011406    KOB56570.1    KOB56571.1    GDQN01009456    JAT81598.1    EU325546    ACB54936.1    KC469895    AGC92658.1    JTDY01003920    KOB68825.1    ODYU01007948    SOQ51161.1    EU190492    KQ971330    ABW74152.1    EFA00992.1    GFDL01006480    JAV28565.1    DS231951    EDS28614.1    GAMC01003574    JAC02982.1    LJIG01016008    KRT81890.1    CP012524    ALC40987.1    UFQT01000391    SSX23886.1    JXJN01008300    CCAG010016895    CH964154    EDW79713.1    JRES01001465    KNC22685.1    GBXI01006013    JAD08279.1    CM000071    EAL26380.1    GDHF01007807    JAI44507.1    CH480816    EDW48253.1    CH916367    EDW00680.1    CH673921    EDY71579.1    CM000362    CM002911    EDX07459.1    KMY94474.1    OUUW01000001    SPP74934.1    CH902619    EDV37386.1    BT023159    AAY55575.1    CH940648    EDW60697.1    AE013599    BT088821    AAF57892.1    ACS35599.1    AHN56315.1    CM000158    EDW92182.1    KY681052    AUP42579.1    CH479183    EDW35413.1    CH933808    EDW10296.1    GAKP01005288    JAC53664.1    CH954179    EDV55650.1    KA645437    AFP60066.1    LSMT01000104    PFX27397.1    GDIP01208687    JAJ14715.1    GDIP01201838    GDIP01037909    LRGB01000027    JAM65806.1    KZS21268.1    GBYB01011398    JAG81165.1    GDIP01183140    JAJ40262.1    GDIQ01023124    JAN71613.1    GDIP01010132    JAM93583.1    GDIP01063514    JAM40201.1    GDIP01037059    JAM66656.1    GDIQ01208818    JAK42907.1    LJIJ01001635    ODM91190.1    GDIQ01060520    JAN34217.1    AJWK01017126    GDIP01193044    JAJ30358.1    GDIP01062160    JAM41555.1    LJIJ01000093    ODN02879.1    JH431165    DS470055    EDO30402.1    GDHF01031325    JAI20989.1    DS469888    EDO31598.1    UFQS01002931    UFQT01002931    SSX14920.1    SSX34307.1    GL732651    EFX68639.1    GDIQ01227562    JAK24163.1    GDIQ01079451    JAN15286.1    KK122473    KFM82786.1    GDIQ01191515    JAK60210.1    GDIQ01240756    GDIQ01239058    GDIQ01035184    JAN59553.1    MUJZ01031830    OTF77593.1   
Pfam
PF01522   Polysacc_deac_1        + More
PF00050   Kazal_1
Interpro
IPR002509   NODB_dom        + More
IPR011330   Glyco_hydro/deAcase_b/a-brl       
IPR036058   Kazal_dom_sf       
IPR002350   Kazal_dom       
IPR036322   WD40_repeat_dom_sf       
IPR015943   WD40/YVTN_repeat-like_dom_sf       
IPR001680   WD40_repeat       
IPR001766   Fork_head_dom       
SUPFAM
SSF88713   SSF88713        + More
SSF100895   SSF100895       
SSF50978   SSF50978       
Gene 3D
PDB
5Z34     E-value=6.69639e-155,     Score=1404

Ontologies

Topology

Subcellular location
Nucleus  
SignalP
Position:   1 - 17,         Likelihood:  0.998251
 
 
Length:
379
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
1.74369
Exp number, first 60 AAs:
1.73199
Total prob of N-in:
0.08630
outside
1  -  379
 
 

Population Genetic Test Statistics

Pi
163.04926
Theta
153.93201
Tajima's D
-0.894199
CLR
3.139477
CSRT
0.15989200539973
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
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