SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO16331  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA013781
Annotation
PREDICTED:_uncharacterized_protein_LOC105386011_[Plutella_xylostella]
Location in the cell
Mitochondrial   Reliability : 1.119
 

Sequence

CDS
ATGTCGAAATACTTGTTTATCTGTTTGATATGTGCTTACATTAGTACGGGACACGGGAAAACTGTTATTGTCGGACAAACCTACGATTATAATAACGTTGTGAGGAAAGTACACGAGCAAAGTGTGGAGGCCAACGCGATTCCTTTGTTCAAGAGGGTGCAGGAGGTATTCTTCGAATTCCCTCAGCCGGAGCAGAAGATCAAGGGCATCGCTATAAAGGACCTCGAGAATGGCTTGGCCGAGCCGTCGATCACCCGAGGAGGATTGGGCTTTAACTTCGTCAACATCAAACTGAAGAGCGATAGAGGATCCGGCTTCAAGTTTGTTATCGAAATATACGCGTGA
Protein
MSKYLFICLICAYISTGHGKTVIVGQTYDYNNVVRKVHEQSVEANAIPLFKRVQEVFFEFPQPEQKIKGIAIKDLENGLAEPSITRGGLGFNFVNIKLKSDRGSGFKFVIEIYA

Summary

EMBL
BABH01025361    GDQN01002024    JAT89030.1    KQ459992    KPJ18593.1    KQ459166    + More
KPJ03562.1    JTDY01000808    KOB75797.1    NWSH01000767    PCG74318.1    AGBW02012289    OWR45279.1    KZ150342    PZC71302.1    AK402148    BAM18770.1    KPJ18592.1    KPJ03563.1    ODYU01003892    SOQ43216.1    GAIX01003081    JAA89479.1    ODYU01004898    SOQ45248.1    JQ660354    AFH57171.1    JQ619214    AFH57152.1    GDQN01007818    GDQN01000344    JAT83236.1    JAT90710.1    GAIX01009070    JAA83490.1    KQ460845    KPJ12004.1    KPJ12085.1    AK401495    KQ459603    BAM18117.1    KPI92700.1    AK401791    BAM18413.1    AB499730    BAH57948.1    AGBW02014390    OWR41766.1    AK401546    KQ459592    BAM18168.1    KPI96788.1    GDQN01003582    JAT87472.1    NWSH01000473    PCG76158.1    JTDY01000603    KOB76496.1    ODYU01007904    SOQ51090.1    JQ619213    AFH57151.1    GAIX01000356    JAA92204.1    KPJ03564.1    KZ149912    PZC78068.1    KPJ18591.1    ODYU01004645    SOQ44744.1    JQ619216    AFH57154.1    KZ149959    PZC76392.1    KQ460416    KPJ14935.1    RSAL01000006    RVE54240.1    KQ459593    KPI96711.1    GBRD01011274    JAG54550.1    ODYU01008370    SOQ51899.1    NWSH01005557    PCG64129.1    SOQ43214.1    ODYU01003537    SOQ42442.1    KQ460940    KPJ10619.1    ODYU01006834    SOQ49044.1    NWSH01004350    PCG65192.1    NWSH01001065    PCG72834.1    KZ149899    PZC78605.1    KQ459324    KPJ01662.1    PZC71300.1    AB012298    BAA34219.1    JQ619212    AFH57150.1    ODYU01010243    SOQ55221.1    ODYU01000023    SOQ34093.1    NWSH01001063    PCG72838.1    AGBW02009001    OWR51885.1    ODYU01008860    SOQ52824.1    KQ459249    KPJ02447.1    PZC78604.1    KQ459896    KPJ19465.1    BABH01009446    BABH01009447    BABH01009448    JTDY01006411    KOB66034.1    SOQ51898.1    JTDY01002436    KOB71425.1    SOQ43215.1    KPJ18596.1    KPJ03559.1    PCG74329.1    BABH01006584    BABH01044987    JTDY01000478    KOB76997.1    AGBW02014560    OWR41426.1    PZC78609.1    NWSH01000152    PCG78998.1    JQ619211    AFH57149.1    GDQN01001318    JAT89736.1    OWR41429.1    RSAL01000385    RVE42034.1    KPJ19461.1    KQ459583    KPI98676.1    BABH01025365    GAIX01006931    JAA85629.1    GQ338156    ACT79296.1    GAIX01002844    JAA89716.1    ODYU01011908    SOQ57917.1   
Pfam
PF15868   MBF2
Interpro
IPR031734   MBF2       

Ontologies

Topology

SignalP
Position:   1 - 19,         Likelihood:  0.983805
 
 
Length:
114
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
2.60587
Exp number, first 60 AAs:
2.60348
Total prob of N-in:
0.14363
outside
1  -  114
 
 

Population Genetic Test Statistics

Pi
69.747913
Theta
107.099846
Tajima's D
-0.940847
CLR
508.672214
CSRT
0.148742562871856
Interpretation
Uncertain
Peptides ×
Source Sequence Identity Evalue
29197581 TVIVGQTYDYNNVVR 100.00 6e-05
24402669 RVMESEMMPSGDGQTMVKDWWCK 100.00 2e-04
28467696 RVQDDPDSADAIIAAHTIYR 100.00 2e-04
29197581 KVHEQSVEANAIPIFK 100.00 2e-04
24402669 TVITEGNEKGVETFIK 100.00 2e-04
28467696 TVITINAK 100.00 2e-04
29197581 RVQEVFFEFPQPEQK 100.00 2e-04
26822097 GGIGFNFVNIK 100.00 0.002
26280517 IWNEDNESQMCCYR 100.00 0.002
25044914 VQEAIQIIDK 100.00 0.002
24402669 VQECSVYK 100.00 0.002
28467696 VQEPIAAN 100.00 0.002
29197581 VHEQSVEANAIPIFK 100.00 0.002
Copyright@ 2018-2023    Any Comments and suggestions mail to:zhuzl@cqu.edu.cn   渝ICP备19006517号

渝公网安备 50010602502065号