Gene

KWMTBOMO16329

Pre Gene Modal

BGIBMGA013761

Annotation

F-box/LRR-repeat_protein_14_[Operophtera_brumata]

Location

Bomo_Chr28(-):5509489-5510958      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.046 Mitochondrial   Reliability : 1.433

CDS

ATGAGTGCGTGGACTGAGGAAATGTTGTCCTGGCGGGACGAACGGCTTGGCCTTACCGAGTTACCGAGCACGACGACGAGGAGAAAACATCGTAGCGCGCCTTACAGACTACACCGGCCGCATTTGCCTTCCGCTCACGTGTCCGAGCCCCCGACTGAGCCTCAGGGAACTCACATCTCGAGGCTGTATCCAGAGTTGTTGGCGCTTATATTTGAAAGACTACCGGTGCGAGACAGGGGCCGAGCTGCACAAGTTTGTCGCGCGTGGAGGGACGCAGCTGATCGAAGATCTGTTTGGCGTGGCGTAGAAGCCGCTCTGCATCTACGGAGACCTGCTCCTGTACTGTTTGCATCCTTAGCTAGACGTGGAGTAACGGACTCTTCGCTCGGAAGGATCGCTCAATCGTTAAAGAACTTGGAAGAACTAGAGCTAGGCGGTTGCTGCAACATTACGGATACAGGTCTGCTGTTAATAGCATGGGGACTTAGGAATCTCCGTCGATTAAACCTGCGGTCGTGTTGGCACGTTAACGATGCCGGAATCGCCCACCTGTGCGGCGGAGGGGAAGCCAGGGGAACTCCAGAACTCGAGCATTTGGGCTTGCAAGATTGCCAAAGGTTAACAGATGAAGCATTGAGACACGCCGCCACAGGTCTTCCTAAACTTAAATCCATAAATCTGTCTTTCTGCGTAGCCGTTACCGATGCGGGCTTGAGGCATTTAGCGAGACTGCCGCATTTAGAAGACGTTAATTTAAGGGCTTGCGACGGAGTGTCCGACGCTGGTGTCGCCCATCTGGCCGAGAGCGGAAGATTGAGGGCTCTCGACGTTTCGTTCTGTGATAAAGTTGGAGATGAAGCGCTATCGCATGCGACGCTGGGCTTGTCCGGGCTGCGTTCGTTATCTCTAAGCGCTTGTCGGCTAACGGACGAAGGCTTGGAGAGGGTCGGCCGGTTATCGCAGCTAGAAACTCTCAATATAGGACAATGCACGAAGGTCACAGACAGAGGCCTCCGGGCGCTCGGCGAGGGTCTGCGGAACTTGAAGGCGATAGATTTGTACGGTTGCACGGGCATAACTCCGCAAGGCTTGGACCATATCGTGAAGTTGCCTCGGCTCAGTGTACTTAACCTCGGTCTGTGGCATGTGCGGTGA

Protein

MSAWTEEMLSWRDERLGLTELPSTTTRRKHRSAPYRLHRPHLPSAHVSEPPTEPQGTHISRLYPELLALIFERLPVRDRGRAAQVCRAWRDAADRRSVWRGVEAALHLRRPAPVLFASLARRGVTDSSLGRIAQSLKNLEELELGGCCNITDTGLLLIAWGLRNLRRLNLRSCWHVNDAGIAHLCGGGEARGTPELEHLGLQDCQRLTDEALRHAATGLPKLKSINLSFCVAVTDAGLRHLARLPHLEDVNLRACDGVSDAGVAHLAESGRLRALDVSFCDKVGDEALSHATLGLSGLRSLSLSACRLTDEGLERVGRLSQLETLNIGQCTKVTDRGLRALGEGLRNLKAIDLYGCTGITPQGLDHIVKLPRLSVLNLGLWHVR

Uniprot

H9JW48   A0A0L7KJU7   A0A2A4IWL7   A0A2W1BAN2   A0A2H1W1A6   A0A0N0PA49   + More
A0A0N1IJ83   A0A212EXW4   A0A1Q3FZ54   A0A0V0GBR9   A0A069DTB8   B4QHL5   A0A1L8DCK8   A0A067QZI5   A0A2J7QLG5   T1HGW9   A0A0N8ES24   A0A182IV42   A0A182PTW2   A0A182FQH3   A0A182RAF9   A0A182QNN9   A0A182SJB4   A0A084W5M9   A0A182N8X6   W5JT96   A0A1S4H4H8   A0A182YN18   A0A2P8Z3F7   A0A182VSR6   A0A182M879   A0A023ET72   A0A182GGR0   A0A182H1E8   D6WRU1   E0VAH8   A0A0A9XRW6   A0A3L8DUQ0   E9HP54   A0A1Y1JTK6   A0A0M4EW72   A0A1W4WDC9   A0A1J1HU15   A0A0P6JY00   E9IV12   A0A158P281   A0A195E433   A0A0P6DJR4   B4GAF9   A0A0K8WDL3   A0A034VT24   A0A0P5S3C0   Q291P6   A0A3B0JJS0   B4I893   Q9W214   E2B384   B4MQC2   A0A023F3B7   B4P5R6   A0A0J9RJ43   A0A0B4KF28   B3NNM4   A0A1I8Q603   A0A1B6L2J3   A0A0C9QZA0   B4LIS9   T1PBU0   B4KP95   B4J434   A0A1W4VQR6   A0A026X0J4   A0A0P5L892   A0A195FI20   A0A0A1WLU1   A0A2A3E7T8   A0A0L0CAN8   A0A151X218   A0A060YSE4   A0A060WIH0   A0A0L7R3E2   A0A088A7M2   A0A310SPX5   A0A0P4WAM1   A0A1B6IHV8   A0A1B6EUG4   W8AY04   A0A195AVC7   A0A195D2Z4   A0A0U2SRE8   A0A293N3T1   A0A1B0DII7   B3MIW7   A0A182X2N6   A0A182I5F0   F4W6H2   Q7PLZ3   U5EVR3  

Pubmed

19121390    26227816    28756777    26354079    22118469    26334808    + More
17994087    24845553    26999592    24438588    20920257    23761445    12364791    25244985    29403074    24945155    26483478    18362917    19820115    20566863    25401762    26823975    30249741    21292972    28004739    21282665    21347285    25348373    15632085    11069107    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    20798317    25474469    17550304    22936249    25315136    24508170    25830018    26108605    24755649    24495485    26580012    21719571   

EMBL

BABH01025356    JTDY01009347    KOB63623.1    NWSH01006314    PCG63520.1    KZ150342    + More
PZC71305.1    ODYU01005694    SOQ46807.1    KQ459166    KPJ03566.1    KQ459992    KPJ18590.1    AGBW02011667    OWR46330.1    GFDL01002232    JAV32813.1    GECL01001335    JAP04789.1    GBGD01001561    JAC87328.1    CM000362    EDX08244.1    GFDF01009886    JAV04198.1    KK853153    KDR10540.1    NEVH01013245    PNF29422.1    ACPB03000098    GDUN01000658    JAN95261.1    AXCN02001874    ATLV01020674    KE525304    KFB45523.1    ADMH02000212    ETN67361.1    AAAB01008980    PYGN01000213    PSN51042.1    AXCM01002914    GAPW01001110    JAC12488.1    JXUM01062204    KQ562188    KXJ76464.1    JXUM01103226    KQ564786    KXJ71752.1    KQ971351    EFA06580.2    DS235006    EEB10384.1    GBHO01021218    GBRD01003983    GDHC01021608    JAG22386.1    JAG61838.1    JAP97020.1    QOIP01000004    RLU24022.1    GL732703    EFX66450.1    GEZM01101475    GEZM01101474    JAV52644.1    CP012524    ALC42275.1    CVRI01000020    CRK90860.1    GDIQ01003870    JAN90867.1    GL766116    EFZ15576.1    ADTU01007009    KQ979657    KYN19913.1    GDIP01149905    GDIQ01076496    LRGB01000788    JAJ73497.1    JAN18241.1    KZS15900.1    CH479181    EDW31911.1    GDHF01003081    JAI49233.1    GAKP01013967    GAKP01013966    JAC44985.1    GDIQ01092938    JAL58788.1    CM000071    EAL25066.2    OUUW01000001    SPP72851.1    CH480824    EDW56818.1    AE013599    AF187980    AY119098    AAF46886.1    AAG17034.1    AAM50958.1    AHN56538.1    GL445305    EFN89866.1    CH963849    EDW74311.1    GBBI01003011    JAC15701.1    CM000158    EDW91832.2    CM002911    KMY95847.1    AGB93669.1    CH954179    EDV56675.2    GEBQ01022050    JAT17927.1    GBYB01006037    JAG75804.1    CH940648    EDW61432.2    KA646232    AFP60861.1    CH933808    EDW09071.2    CH916367    EDW02640.1    KK107054    EZA61593.1    GDIQ01173422    JAK78303.1    KQ981523    KYN40340.1    GBXI01014792    JAC99499.1    KZ288347    PBC27574.1    JRES01000678    KNC29317.1    KQ982580    KYQ54473.1    FR918440    CDQ94718.1    FR904467    CDQ64330.1    KQ414663    KOC65405.1    KQ761467    OAD57507.1    GDRN01057935    JAI65644.1    GECU01021198    JAS86508.1    GECZ01028212    JAS41557.1    GAMC01012660    JAB93895.1    KQ976731    KYM76188.1    KQ976885    KYN07273.1    KU064717    ALR88706.1    GFWV01023057    MAA47784.1    AJVK01062634    CH902619    EDV37033.2    APCN01006407    GL887707    EGI70307.1    EAA14603.5    GANO01001761    JAB58110.1   

Proteomes

UP000005204    UP000037510    UP000218220    UP000053268    UP000053240    UP000007151    + More
UP000000304    UP000027135    UP000235965    UP000015103    UP000075880    UP000075885    UP000069272    UP000075900    UP000075886    UP000075901    UP000030765    UP000075884    UP000000673    UP000076408    UP000245037    UP000075920    UP000075883    UP000069940    UP000249989    UP000007266    UP000009046    UP000279307    UP000000305    UP000092553    UP000192223    UP000183832    UP000005205    UP000078492    UP000076858    UP000008744    UP000001819    UP000268350    UP000001292    UP000000803    UP000008237    UP000007798    UP000002282    UP000008711    UP000095300    UP000008792    UP000095301    UP000009192    UP000001070    UP000192221    UP000053097    UP000078541    UP000242457    UP000037069    UP000075809    UP000193380    UP000053825    UP000005203    UP000078540    UP000078542    UP000092462    UP000007801    UP000076407    UP000075840    UP000007755    UP000007062   

PRIDE

H9JW48    Q9W214   

Pfam

PF13516   LRR_6        + More
PF00646   F-box
PF12937   F-box-like
PF00560   LRR_1

Interpro

IPR032675   LRR_dom_sf        + More
IPR006553   Leu-rich_rpt_Cys-con_subtyp       
IPR036047   F-box-like_dom_sf       
IPR001611   Leu-rich_rpt       
IPR001810   F-box_dom       

SUPFAM

SSF81383   SSF81383       

Gene 3D

3.80.10.10    

ProteinModelPortal

H9JW48   A0A0L7KJU7   A0A2A4IWL7   A0A2W1BAN2   A0A2H1W1A6   A0A0N0PA49   + More
A0A0N1IJ83   A0A212EXW4   A0A1Q3FZ54   A0A0V0GBR9   A0A069DTB8   B4QHL5   A0A1L8DCK8   A0A067QZI5   A0A2J7QLG5   T1HGW9   A0A0N8ES24   A0A182IV42   A0A182PTW2   A0A182FQH3   A0A182RAF9   A0A182QNN9   A0A182SJB4   A0A084W5M9   A0A182N8X6   W5JT96   A0A1S4H4H8   A0A182YN18   A0A2P8Z3F7   A0A182VSR6   A0A182M879   A0A023ET72   A0A182GGR0   A0A182H1E8   D6WRU1   E0VAH8   A0A0A9XRW6   A0A3L8DUQ0   E9HP54   A0A1Y1JTK6   A0A0M4EW72   A0A1W4WDC9   A0A1J1HU15   A0A0P6JY00   E9IV12   A0A158P281   A0A195E433   A0A0P6DJR4   B4GAF9   A0A0K8WDL3   A0A034VT24   A0A0P5S3C0   Q291P6   A0A3B0JJS0   B4I893   Q9W214   E2B384   B4MQC2   A0A023F3B7   B4P5R6   A0A0J9RJ43   A0A0B4KF28   B3NNM4   A0A1I8Q603   A0A1B6L2J3   A0A0C9QZA0   B4LIS9   T1PBU0   B4KP95   B4J434   A0A1W4VQR6   A0A026X0J4   A0A0P5L892   A0A195FI20   A0A0A1WLU1   A0A2A3E7T8   A0A0L0CAN8   A0A151X218   A0A060YSE4   A0A060WIH0   A0A0L7R3E2   A0A088A7M2   A0A310SPX5   A0A0P4WAM1   A0A1B6IHV8   A0A1B6EUG4   W8AY04   A0A195AVC7   A0A195D2Z4   A0A0U2SRE8   A0A293N3T1   A0A1B0DII7   B3MIW7   A0A182X2N6   A0A182I5F0   F4W6H2   Q7PLZ3   U5EVR3  

PDB

5JH5     E-value=1.05386e-06,     Score=126

KEGG

101745946    K10280 F-box and leucine-rich repeat protein 14 | (RefSeq) F-box/LRR-repeat protein 14

GO

GO:0031146   GO:0006511   GO:0019005   GO:0016567   GO:0005515   GO:0005549   GO:0007608   GO:0016020   GO:0009166   GO:0005839   GO:0051603   GO:0046835   GO:0006281   GO:0006259  

Length:

384

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.01608

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00656

outside

1  -  384

 

 

Pi

66.587995

Theta

163.232901

Tajima's D

-0.407623

CLR

74.348707

CSRT

0.260586970651467

Interpretation

Uncertain