Gene

KWMTBOMO16325

Annotation

ring_and_YY1_binding_protein_[Bombyx_mori]

Location

Bomo_Chr28(-):5440660-5447508      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 4.286

CDS

ATGGACAAGAAAAATGCCATTAGAAGAGCCAAAAGGCCATCAAAAGTGCTGGAAGAAAACTACTGGGATTGTAGTGTTTGCACGTACAGGAATAACGCGGAAGCTTTCAAATGTTCCATGTGTGACGTTAGAAAAGGTACATCGACCCGCAAGCCTCGGCTCAACCCCGCTCTGGTGGCCGCGCAAGCGTCCGGCACGGCGCCCACGGGCAGCTCGGTCCAGAAGCGGCCTCGTTCGGCGAACTCGTTCAAGAAGAAACGACGCCACCCGCCGAGACTCAACAACGTGGACCGCAGCTCGGCCCAAACCAGAGAGGTAACAGTGAGTGGCGTTACCGTTGTCATAACCGAATACAAACCGAAGAAATCGGTTTCCAGCAGCTCGAGTGACGTTGAATCTTCAAACGACGCGCGACCTTGA

Protein

MDKKNAIRRAKRPSKVLEENYWDCSVCTYRNNAEAFKCSMCDVRKGTSTRKPRLNPALVAAQASGTAPTGSSVQKRPRSANSFKKKRRHPPRLNNVDRSSAQTREVTVSGVTVVITEYKPKKSVSSSSSDVESSNDARP

Uniprot

B9VSG4   A0A3S2M5D9   A0A2A4K8N0   A0A2H1V2K0   A0A212EHI1   A0A0N0P9T5   + More
A0A0N1IQ40   A0A1W4WPK8   A0A1Q3FMX4   N6TD25   A0A1Y1LL41   U5ESP8   U4UU28   A0A1I8M8E1   W8C556   B4MQC3   B3MIW8   A0A034VR20   A0A0K8VWA1   A0A0A1X2R4   A0A1Q3FN48   A0A3B0J1R8   Q291P7   B4GAF8   B0WL61   A0A1W4VQL8   B4P5J9   B4I892   B3NNM3   B4QHL4   B4LIS8   B4KP94   A0A0M5J317   Q9W215   A0A023EH55   A0A0K8TLM6   B4J435   Q16Z83   A0A1I8PVB8   A0A182VSR7   A0A1L8DDK6   A0A1I8M8E2   A0A1A9WQL4   A0A1B0GBR5   A0A1A9YAK4   A0A1A9V7K6   A0A1B0BED5   A0A1A9ZB47   A0A182YN17   A0A182FQH2   A0A2M3ZCF4   A0A182T972   A0A2M4AZ65   Q7Q0K6   A0A182TRI7   A0A182XPH0   A0A182I5F1   A0A182QUG5   E2AU06   A0A0A9VUT4   A0A182USH4   A0A1B6GKH3   A0A182RAF8   A0A1I8PVE3   A0A2R7VWR1   A0A1B6ID85   A0A2M3ZCN1   A0A2M4CP66   A0A1S4H4C8   A0A182JAB1   A0A2M4C376   R4G5F8   A0A0P4W0J9   A0A336LHX2   A0A195EHP8   A0A195BAX5   A0A195FAM1   A0A158NK94   A0A151WIT2   A0A0V0GDB3   A0A023F9F7   A0A1B6L813   A0A224XY61   A0A1B0CHL7   A0A069DPR9   A0A151I7M8   T1IK59   W5JSL3   A0A2M4C264   A0A0J7L846   A0A2W1BKW9   A0A026WIR4   E0VPG1   A0A1J1HRZ6   A0A087TFQ6   V5I1D6   B7PIZ5   A0A1S3DFZ7   A0A347ZJF3  

Pubmed

22118469    26354079    23537049    28004739    25315136    24495485    + More
17994087    25348373    25830018    15632085    17550304    22936249    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    24945155    26369729    17510324    25244985    12364791    20798317    25401762    26823975    27129103    21347285    25474469    26334808    20920257    23761445    28756777    24508170    30249741    20566863    25765539   

EMBL

FJ599750    ACM46123.1    RSAL01000029    RVE51759.1    NWSH01000040    PCG80356.1    + More
ODYU01000356    SOQ34996.1    AGBW02014875    OWR40953.1    KQ459166    KPJ03568.1    KQ459992    KPJ18589.1    GFDL01006189    JAV28856.1    APGK01035267    KB740923    ENN78239.1    GEZM01052600    GEZM01052599    JAV74394.1    GANO01003142    JAB56729.1    KI209442    ERL96038.1    GAMC01009196    JAB97359.1    CH963849    EDW74312.1    CH902619    EDV37034.1    GAKP01014385    JAC44567.1    GDHF01009165    JAI43149.1    GBXI01009126    JAD05166.1    GFDL01006117    JAV28928.1    OUUW01000001    SPP72852.1    CM000071    EAL25065.1    CH479181    EDW31910.1    DS231980    EDS30234.1    CM000158    EDW91830.1    CH480824    EDW56817.1    CH954179    EDV56674.1    CM000362    CM002911    EDX08243.1    KMY95846.1    CH940648    EDW61431.1    CH933808    EDW09070.1    CP012524    ALC42274.1    AE013599    AY069460    KX531768    AAF46885.2    AAL39605.1    AHN56537.1    ANY27578.1    GAPW01005429    JAC08169.1    GDAI01002364    JAI15239.1    CH916367    EDW02641.1    CH477495    EAT39977.1    GFDF01009664    JAV04420.1    CCAG010005883    JXJN01012855    GGFM01005486    MBW26237.1    GGFK01012763    MBW46084.1    AAAB01008980    EAA14605.2    APCN01006411    AXCN02001872    GL442764    EFN63082.1    GBHO01045613    GBHO01045611    GDHC01010437    JAF97990.1    JAF97992.1    JAQ08192.1    GECZ01006976    JAS62793.1    KK854135    PTY11902.1    GECU01022820    JAS84886.1    GGFM01005511    MBW26262.1    GGFL01002954    MBW67132.1    GGFJ01010317    MBW59458.1    ACPB03013655    GAHY01000006    JAA77504.1    GDKW01001359    JAI55236.1    UFQS01000004    UFQT01000004    SSW96828.1    SSX17215.1    KQ978881    KYN27783.1    KQ976537    KYM81344.1    KQ981693    KYN37670.1    ADTU01018747    KQ983082    KYQ47736.1    GECL01000743    JAP05381.1    GBBI01000697    JAC18015.1    GEBQ01020125    JAT19852.1    GFTR01002916    JAW13510.1    AJWK01012480    AJWK01012481    GBGD01003203    JAC85686.1    KQ978406    KYM94156.1    JH430421    ADMH02000212    ETN67362.1    GGFJ01010213    MBW59354.1    LBMM01000337    KMR00426.1    KZ150109    PZC73370.1    KK107183    QOIP01000011    EZA55868.1    RLU16661.1    DS235366    EEB15267.1    CVRI01000020    CRK90856.1    KK115013    KFM63945.1    GANP01003285    JAB81183.1    ABJB010345854    ABJB010584304    DS722680    EEC06567.1    FX985721    BBA84459.1   

Proteomes

UP000283053    UP000218220    UP000007151    UP000053268    UP000053240    UP000192223    + More
UP000019118    UP000030742    UP000095301    UP000007798    UP000007801    UP000268350    UP000001819    UP000008744    UP000002320    UP000192221    UP000002282    UP000001292    UP000008711    UP000000304    UP000008792    UP000009192    UP000092553    UP000000803    UP000001070    UP000008820    UP000095300    UP000075920    UP000091820    UP000092444    UP000092443    UP000078200    UP000092460    UP000092445    UP000076408    UP000069272    UP000075901    UP000007062    UP000075902    UP000076407    UP000075840    UP000075886    UP000000311    UP000075903    UP000075900    UP000075880    UP000015103    UP000078492    UP000078540    UP000078541    UP000005205    UP000075809    UP000092461    UP000078542    UP000000673    UP000036403    UP000053097    UP000279307    UP000009046    UP000183832    UP000054359    UP000001555    UP000079169   

PRIDE

B9VSG4    Q9W215   

Pfam

PF17219   YAF2_RYBP        + More
PF00641   zf-RanBP

Interpro

IPR001876   Znf_RanBP2        + More
IPR039958   RYBP/YAF2       
IPR033774   YAF2_RYBP       
IPR036443   Znf_RanBP2_sf       

SUPFAM

SSF90209   SSF90209       

ProteinModelPortal

B9VSG4   A0A3S2M5D9   A0A2A4K8N0   A0A2H1V2K0   A0A212EHI1   A0A0N0P9T5   + More
A0A0N1IQ40   A0A1W4WPK8   A0A1Q3FMX4   N6TD25   A0A1Y1LL41   U5ESP8   U4UU28   A0A1I8M8E1   W8C556   B4MQC3   B3MIW8   A0A034VR20   A0A0K8VWA1   A0A0A1X2R4   A0A1Q3FN48   A0A3B0J1R8   Q291P7   B4GAF8   B0WL61   A0A1W4VQL8   B4P5J9   B4I892   B3NNM3   B4QHL4   B4LIS8   B4KP94   A0A0M5J317   Q9W215   A0A023EH55   A0A0K8TLM6   B4J435   Q16Z83   A0A1I8PVB8   A0A182VSR7   A0A1L8DDK6   A0A1I8M8E2   A0A1A9WQL4   A0A1B0GBR5   A0A1A9YAK4   A0A1A9V7K6   A0A1B0BED5   A0A1A9ZB47   A0A182YN17   A0A182FQH2   A0A2M3ZCF4   A0A182T972   A0A2M4AZ65   Q7Q0K6   A0A182TRI7   A0A182XPH0   A0A182I5F1   A0A182QUG5   E2AU06   A0A0A9VUT4   A0A182USH4   A0A1B6GKH3   A0A182RAF8   A0A1I8PVE3   A0A2R7VWR1   A0A1B6ID85   A0A2M3ZCN1   A0A2M4CP66   A0A1S4H4C8   A0A182JAB1   A0A2M4C376   R4G5F8   A0A0P4W0J9   A0A336LHX2   A0A195EHP8   A0A195BAX5   A0A195FAM1   A0A158NK94   A0A151WIT2   A0A0V0GDB3   A0A023F9F7   A0A1B6L813   A0A224XY61   A0A1B0CHL7   A0A069DPR9   A0A151I7M8   T1IK59   W5JSL3   A0A2M4C264   A0A0J7L846   A0A2W1BKW9   A0A026WIR4   E0VPG1   A0A1J1HRZ6   A0A087TFQ6   V5I1D6   B7PIZ5   A0A1S3DFZ7   A0A347ZJF3  

PDB

2D9G     E-value=3.43494e-11,     Score=158

KEGG

100301503    K11468 YY1-associated factor 2 | (RefSeq) Rybp; ring and YY1 binding protein

GO

GO:0046872   GO:0045893   GO:0003713   GO:0003714   GO:0031146   GO:0050777   GO:0043066   GO:0016604   GO:0003677   GO:0008270   GO:0005622   GO:0005840   GO:0006412   GO:0009166   GO:0005839   GO:0051603   GO:0046835   GO:0006281   GO:0006259  

PANTHER

PTHR12920  

Length:

139

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.01716

Exp number, first 60 AAs:

0.00603

Total prob of N-in:

0.70241

inside

1  -  139

 

 

Pi

255.881684

Theta

175.449048

Tajima's D

1.78565

CLR

0.042726

CSRT

0.841957902104895

Interpretation

Uncertain