Gene

KWMTBOMO16323

Pre Gene Modal

BGIBMGA013779

Annotation

PREDICTED:_early_endosome_antigen_1_isoform_X2_[Bombyx_mori]

Location

Bomo_Chr28(+):5346129-5395414      View in EpiBrowser

Location in the cell

Cytoskeletal   Reliability : 2.328

CDS

ATGTTCTTTACATTCGATTATAGATGGATATGCGGGAAACGAGCCAAGCTGTATCTCCGCGAGTACGGTGCGGAGGAGGAGCGGCCGGCGTGCCGGGAGGAGTGGCGGCGCGGCGAGTGGACGGGCGCGCGCGGCCGGCTGCCCCAGGTGGACCGCAGCCCCTCACGCCGCAGCCCCTACCTCGCGCGCGATGACGAGCCCTCGCCCGCGCCCGACGAGCGCGGCCGCTCCGCCTCGGCCGGCGCCCACCACCGCGCTCGTCCGCGTCCCCTGCGCTACCAGTCGCTCGAACGCGACTACGACCGCTCGTACGCGCCGCCTCCACCCCCCGAGGACGACTACTACCGCCGCGAGCCGCCCCCCCTCTTCCTCGGCGAGCTGCAGTCCCAGAACTCGGATCTGCAACGGGAACTGGGCAACCTCAAGAAAGAACTCGAATTGACCAACCAGAAGCTCGGCTCCAGCATGCACAGCATCAAGACCTTCTGGAGTCCCGAGCTCAAAAAAGAACGGGCACTGAGAAAGGAAGAGAGCGCCAAATACAGCCTCATTAATGACCAGCTGAAACTGCTCAATCAGGAGAATCAGAAACAAGCGATGCTGGTACGTCAACTGGAAGAAGAGCTGAGGATGAGGATAAGGCAGCCAGCTCCTGAACTCCAACAACAGCTGGAGGCACTGTACGCTGAGAACGAACACCTGCAGAGGGAGATAGCGATATTAAGAGACACTATTAAAGAATTGGAACTGAGAATCGAAACGCAGAAGCAAACGCTGCAAGCCAGAGACGAGAGCATCAAAAAACTACTCGAAATGCTCCAGAACAAAGGCATGGGTAAAGAGGAAGAACGTCAGATGTTCCAACAGATGCAGGCGATGGCCCAGAAGCAGCTTAGAGAACAAAATTGTTTTGTGGCCGCCTCGCTGTGGGGCTGCGGGCTCTCGTGGCGGTCGCGCAGCCCCAGCGAGGCGCGGCGGGACGCGTACCGTAGACAGCCGCGGGCGGCGGCGGCGGCTGACCGTCTCGCGTGCTGGCAGGAGCTCAAGGCGACGGCGGACACGCTGCGGGCGCTGCAGGCCCAGCTGGAGCGCGCGCTGGCCGCGGCGGGCCTGCCGGGGGGCAGCGCAGGCGCCACGCTCACCGCCGTGCTCGAGACCAAGGAAGCGCGCATCGCGACCCTCGAGCGGCAGGTCGCGTTGCTCGAGAGCGAGCTGGCCGCGCTCGTGTCGCCGCCGCCGCCCTCCTCCCACGCCTCGCTATACGATAAGGCCGACCCTCCCTTCAAGAGACAACTGGACGAATTCCGGTTGGAGATACAGAGACGGGACCAGGAGATCCTGGCGATGGCCGCGAAGATGAAGGCTCTGGAGGAACAGCATCAGGATTACCAGCGCCACATTGCGGTTCTCAAGGAATCGCTATGTGCTAAAGAGGAGCACTATAGTATGCTTCAGACAGACGTGGAAGAATTGAAAGCAAGACTGGATGAGAAGAGTAGAATGGTCGAGAAGAAAACCGCCGCGACTCTGGCCGCGGCTCATGAGCTGGCCGAACTGAGAGACCATTCCGAAATCAAGGACCGAAAGATCAACGTGCTCCAACGAAAGATTGAGAATCTAGAAGATCTACTGAAGGAAAAAGATAACCAAGTTGACATGGCCAGAGCTAGATTGAATGCAATGCAAGCGCACCACTGTTCTTCCGAAGGAGCACTATCTTCCCTCGAAGAAGTTATAGGAGACAAAGAAAAACAGATTCAACAACTCAGAGAGCAGAGAGACAGAGCCGAACATGAGAAGAACGAAGAGAGGGAACTCCACGAAAGAGAAATAGCGGAATACAAAATGAAACTGCACGCTTTAGAGAGCGAAGTAGAAAAGCTCGGCGCAAGACTAGAAAGAGCTCAGGCGGAAAAAGATAGACTTGAAGCTAAGCTGGAAAGCTCACAATCTGAACTTGGCAAATCTAAAGCTGAGTTAGATAAAGCTGCAAGCGAAGTGGGACGTTCTGGTGCGGATTGGGAAGCTGCTAAGCAACGTCTGGCAAGGCTCGAACTGGAAAATGAAAGACTCAAACATGAATTGGAAAGGTCTCAAACAACTTTCGGAAGAAGTACCCTATCTACTTCTCAAGAACTTGATCGGATGCAGGAAAAAGCTGATAAAACATCAGCAGAATTGAGACGTACTCTGGCCGAGTTGAGAGTGACTCAGGCTGATGCCGAAAGAGCTAGATCTGAGGCTAGTGGCTTGCAAGACAAATTGGAAAAATCGCAGGGCGAAGTGTACCGTTTGAAGGCGAAGTTGGAAAATGCACAAACTGAACAGGATAGTCTGAAAGAGGAATACGACCGCCTCCAATCTTCGATCAGCCGTCTCCATTCAGAAAGAGATAAGGCTATAGCAGAACTAGACAAAGCAAGAGAAGAACTTGAACGTACTCAAGCTACACTTGGCAAAGCACAACTCCAACAAGACAAGCTGCAAGCTTCTCTAGACACAGCTCACTCTGAGATCGACAAGCTACAGGAGAAACTCGATAAATCTGCTGTTGAAGTTAGAAAACTTCAAGTGGATAGAGAGAAACAGGCGTACGATTTCGAGTCCCTGCAGTCACAGTTGGACAAAGCACTGGGTCAAGCGGCCAGACTTCAGAAGGAGCGGGACACGGCACAGCTTGACGCGGACAGATTCCGCGATAAGAATGAAAAAGCTCAGAACTTAGTCACTCGTATACAAAAGGAGAGGGATACAGCATTGGCGGAGGCTGCCAGTTGCCGAGAAAGGGCTGAAGCCGCAGCGGCTGCCGCGAACAGGGCCGCCAGGGACAGAGATAGCGCTGTCACCGAACTGGACGTCCTCAGAGAACGATGGGAGAAAGCGCATCAGCAACATCAAAAATTGACGCTCCGCTATTCTTTGCAGATGGAACGAGATGATGCTCTAACAGAACTCGAGATATTGAAAGAGAAACTGGACAAAGCTCTTTACTCCACACAAAAGACGATTGAAGAGAAAGAAACAGCGCACAAGGAATATGAGAAAATGCTTGAGAAATACGATAGGTCGCAGAACGAAATATATAGACTGCAAAACAAGATCGAGATTTTGGAGGCGGATAAGGACAGACTAGAATTGGAGTTAGAGAAACAAGCACATTTGTCGACAAAGTCCAGAGATGACCAGAGGAAACTACAAGATGAATTATCGAGATTACAGGAAATGTACGACAGAGCATCGTTGCAGCTGGGTAGAACCAAAGAATTCGAAGAAAAGGCCAAGGAAGATATGGACAGGATGAGCGTTGACATAGAAATGGTCAGGGAACGATATGAAAAGGGTCAAATTGAACTGCGGAGAGTCCAAGCGGAAAAAGAAAAACTACTGGCAGATAGCGAACGATTACAATTTGAATACGACAGAGCGATGACTCAATGCGGTAAAGCACAGGCTTCCAATGAAAAAACTCAAGAAGAGATGGCCAGAGTACAGATAGAGCTGGAGAAAATGTATGACAAACATGACAAGGTTTCTTCAGAATTAAGAAGAGTGCAAGCTGAATTGGACAAAGTCAAGCAAGATGCAAGCGGAGCCAGAGAAGAAGCAGAAAGATACGCCGCTCGGTACGGAAAATATCATGACGCAAAAGAGGAACACGAGAGAACAAAAATTGAAGTAGAACGGCTGCGGACACGTCTAGAGAAGACAACGATAGACCTGGAGCGAGCCCGCAAGGCTGAAGAGGAAGTATCCCGGTTACGTTCGGAACTCGAACGCGTCGAAGGTCTCCGAGGTAAATACCAATTCGAACAGGATAAGTGGACCAATGAATTAAACAGAATGCAGGCGGAAATCGACAAACATCGTGAGAGATACGACGCGGCACAAGCTGATGTTCAAAAACTACAGGCCGAGAAGGAACAAGCTGAAACCAAACTACACGAAATGAACATACAACTGGAACTATCCAAGAGCGAAGTCGTAAAATTGAGTGGAGCGTTAGAGAAACAGCGAACAGACTTGGAGCGCGCTCACATTGAGTGCGAAAAGTTCAGGGATCGGTGTGAGAAATTGAAATTACGTTCAGACCAACTAGATAAAGATAACGAAAGACTAAAAGGCGAGTTACAACAGATCGAAAGGATGAAACTTCAGGCGGTCGCTGGCGATAAGGCAAGAACCGAAGATAGACTTGAAATCGAGAGGCTTCGTGATAAGTTGGAAAAAGCAATTCAAGCTCGTGACTCTACTGAAATGGAGGCAGGACGCTTAGCAAAGGAACTCGAAAAGTCTCAGATGCATCTCGCTAAATATCAAGAAACTAACGAAACAACTCGCGTTGAATATGATAGGATGACGAATGAACTGGGAAGAATGCATGAACGACTTGAAAGAACGATCTTAGAAATGAGACAAATCGAACAGGAACGCGATGCGCTGAGAGTAGAGATACAGAACACAAGACGTAACATTGAACAGCAACAGAGAACTTTGGACCACAGAACTCAAGAGACGCTTGTTAAACTCCAACAAGAATTGGCTCAGTCGGTTCGAGACAGAGAAAAGATGGCATCCATTTTGGAACAGAGAGATAAACAAGCCGACGCTATCGAAAAGCAGATCGTTAAATTGGAGGCCGATACAAAGCAATTGACAATAGAACGAGACCAATTAGTGGCACAATTAGAAAAATCTCAAGACATGCTCGTAAACTTCCAGAGAGAACTCAATGCTTCCGAAGCCGAACTACAGAAACAGCGAGATGAAGTACGCAGATTGAAAGAAGAACAGAGGAAACTAGCTCAAGATTCAGAACGTGGAGCAAAATCGGTTATAGAAAATCGCGAGAGAGAGATAGGAAGACTGCAGCAGCAACTTCAAGGTCTCACGAAAGAAAGAGACACAATTAAGCAGCGTGCAGAGAAAGCCGAAAAAGAAGCACAGAAAGCTGGAGAGATCGATAAATGGCGAGCTGCCGTCGAAGCGGAGAAGTCCAAGGCGATCGCTGCAGAAAAAGCCTTATCTGAATGTCAACAGCGCTTGCAATCTTTGGAGAAACAATTCCAGGCGCAGCATCAACAGTTACAGCAGCTACAAGCACGCGGACCGTCTGACGTGCGCGAGGTCCAAAAGCAGCTCGAAGCTGCTCAAGCCGAGGCTCGCGCCCTCGCCACTGAGAGGGAGCGATGCCAGTCGCAGCTCGAGATGCTCGTTCAGGAATTGGAGAAGAGCCAGCTCGATCTCCGCGAAGCGAACAAGAAACTCCAAACAGCTGGTGCTCAGAGCGCGAAGGCTGGCGAAGACGCAGCCCTAGCTAAGAAGCAGATACAAGATGAATTCAAAAAGTTAGATGACGCAAGAAAACATTTCGAAGAACAAAGAAGAGCGTGGGAGAACAAACGGAAAGACGTGGAGGAGAAAGAGAAGTCACTTATGGAATTGGATCGACAGTTAAAGAAGAGAAAAGAGCAAATGGACCAAATGGAAGCTTCATTGAGGAAGGCTGGCGGCAGCACGGCCGCGGTATCAGAGCTGAATCGCAAGCTGACAGACTCTCAGAAAGATGCGGAACAACTGAAGCAACAATTGGATCAGACTAAAGACGAAGCGAAACGGTTGACAACTGAAACGGAACGGCTTCTGCAGCTGGTCCAGATGTCACAGGAGGAACAAGCACAGAAGGAAAAGCAAATTATGGATTTGCAACAATCCGTAAGAAACCTCCAAGCCAAATTAAAAAGTCAGCAGCAAGCACAAGCACAAAGAGAAGAGGCCGGACCCGCTGGCTTCCTCAAAAGCTTTTTCTAA

Protein

MFFTFDYRWICGKRAKLYLREYGAEEERPACREEWRRGEWTGARGRLPQVDRSPSRRSPYLARDDEPSPAPDERGRSASAGAHHRARPRPLRYQSLERDYDRSYAPPPPPEDDYYRREPPPLFLGELQSQNSDLQRELGNLKKELELTNQKLGSSMHSIKTFWSPELKKERALRKEESAKYSLINDQLKLLNQENQKQAMLVRQLEEELRMRIRQPAPELQQQLEALYAENEHLQREIAILRDTIKELELRIETQKQTLQARDESIKKLLEMLQNKGMGKEEERQMFQQMQAMAQKQLREQNCFVAASLWGCGLSWRSRSPSEARRDAYRRQPRAAAAADRLACWQELKATADTLRALQAQLERALAAAGLPGGSAGATLTAVLETKEARIATLERQVALLESELAALVSPPPPSSHASLYDKADPPFKRQLDEFRLEIQRRDQEILAMAAKMKALEEQHQDYQRHIAVLKESLCAKEEHYSMLQTDVEELKARLDEKSRMVEKKTAATLAAAHELAELRDHSEIKDRKINVLQRKIENLEDLLKEKDNQVDMARARLNAMQAHHCSSEGALSSLEEVIGDKEKQIQQLREQRDRAEHEKNEERELHEREIAEYKMKLHALESEVEKLGARLERAQAEKDRLEAKLESSQSELGKSKAELDKAASEVGRSGADWEAAKQRLARLELENERLKHELERSQTTFGRSTLSTSQELDRMQEKADKTSAELRRTLAELRVTQADAERARSEASGLQDKLEKSQGEVYRLKAKLENAQTEQDSLKEEYDRLQSSISRLHSERDKAIAELDKAREELERTQATLGKAQLQQDKLQASLDTAHSEIDKLQEKLDKSAVEVRKLQVDREKQAYDFESLQSQLDKALGQAARLQKERDTAQLDADRFRDKNEKAQNLVTRIQKERDTALAEAASCRERAEAAAAAANRAARDRDSAVTELDVLRERWEKAHQQHQKLTLRYSLQMERDDALTELEILKEKLDKALYSTQKTIEEKETAHKEYEKMLEKYDRSQNEIYRLQNKIEILEADKDRLELELEKQAHLSTKSRDDQRKLQDELSRLQEMYDRASLQLGRTKEFEEKAKEDMDRMSVDIEMVRERYEKGQIELRRVQAEKEKLLADSERLQFEYDRAMTQCGKAQASNEKTQEEMARVQIELEKMYDKHDKVSSELRRVQAELDKVKQDASGAREEAERYAARYGKYHDAKEEHERTKIEVERLRTRLEKTTIDLERARKAEEEVSRLRSELERVEGLRGKYQFEQDKWTNELNRMQAEIDKHRERYDAAQADVQKLQAEKEQAETKLHEMNIQLELSKSEVVKLSGALEKQRTDLERAHIECEKFRDRCEKLKLRSDQLDKDNERLKGELQQIERMKLQAVAGDKARTEDRLEIERLRDKLEKAIQARDSTEMEAGRLAKELEKSQMHLAKYQETNETTRVEYDRMTNELGRMHERLERTILEMRQIEQERDALRVEIQNTRRNIEQQQRTLDHRTQETLVKLQQELAQSVRDREKMASILEQRDKQADAIEKQIVKLEADTKQLTIERDQLVAQLEKSQDMLVNFQRELNASEAELQKQRDEVRRLKEEQRKLAQDSERGAKSVIENREREIGRLQQQLQGLTKERDTIKQRAEKAEKEAQKAGEIDKWRAAVEAEKSKAIAAEKALSECQQRLQSLEKQFQAQHQQLQQLQARGPSDVREVQKQLEAAQAEARALATERERCQSQLEMLVQELEKSQLDLREANKKLQTAGAQSAKAGEDAALAKKQIQDEFKKLDDARKHFEEQRRAWENKRKDVEEKEKSLMELDRQLKKRKEQMDQMEASLRKAGGSTAAVSELNRKLTDSQKDAEQLKQQLDQTKDEAKRLTTETERLLQLVQMSQEEQAQKEKQIMDLQQSVRNLQAKLKSQQQAQAQREEAGPAGFLKSFF

Uniprot

H9JW66   A0A0N1IPW3   A0A3S2NIB2   A0A0N1I3F0   A0A212EHJ7   A0A2H1VHZ3   + More
A0A2W1BNX2   A0A0L7LJT5   A0A1Y1LBI6   A0A1Y1L9B6   A0A139WF92   A0A139WF41   A0A067QWS7   E0VQQ2   A0A182RAF7   A0A182JVT5   A0A0K8VK98   A0A0N0BG52   A0A0L0CAN2   B0XE40   A0A182G4F1   A0A336LGX6  

Pubmed

19121390    26354079    22118469    28756777    26227816    28004739    + More
18362917    19820115    24845553    20566863    26108605    26483478   

EMBL

BABH01025348    KQ459992    KPJ18586.1    RSAL01000029    RVE51758.1    KQ459166    + More
KPJ03570.1    AGBW02014875    OWR40954.1    ODYU01002488    SOQ40032.1    KZ150109    PZC73373.1    JTDY01000841    KOB75697.1    GEZM01061886    GEZM01061885    JAV70258.1    GEZM01061888    JAV70252.1    KQ971354    KYB26541.1    KYB26542.1    KK853153    KDR10536.1    DS235430    EEB15708.1    GDHF01013031    JAI39283.1    KQ435792    KOX74288.1    JRES01000678    KNC29312.1    DS232802    EDS45873.1    JXUM01042118    JXUM01042119    JXUM01042120    JXUM01042121    JXUM01042122    KQ561312    KXJ79028.1    UFQT01000004    SSX17234.1   

Proteomes

UP000005204    UP000053240    UP000283053    UP000053268    UP000007151    UP000037510    + More
UP000007266    UP000027135    UP000009046    UP000075900    UP000075881    UP000053105    UP000037069    UP000002320    UP000069940    UP000249989   

PRIDE

H9JW66   

Pfam

PF10174   Cast

Interpro

IPR019323   ELKS/CAST       

ProteinModelPortal

H9JW66   A0A0N1IPW3   A0A3S2NIB2   A0A0N1I3F0   A0A212EHJ7   A0A2H1VHZ3   + More
A0A2W1BNX2   A0A0L7LJT5   A0A1Y1LBI6   A0A1Y1L9B6   A0A139WF92   A0A139WF41   A0A067QWS7   E0VQQ2   A0A182RAF7   A0A182JVT5   A0A0K8VK98   A0A0N0BG52   A0A0L0CAN2   B0XE40   A0A182G4F1   A0A336LGX6  

PDB

3JBH     E-value=4.06271e-09,     Score=153

KEGG

101745804    no KO assigned | (RefSeq) trichohyalin

GO

GO:0048786   GO:0005622   GO:0005840   GO:0006412   GO:0009166   GO:0005839   GO:0051603   GO:0046835   GO:0006281   GO:0006259  

Length:

1935

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00203

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00010

outside

1  -  1935

 

 

Pi

229.479063

Theta

172.483792

Tajima's D

0.969902

CLR

0.211006

CSRT

0.654167291635418

Interpretation

Uncertain