SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO16316
Pre Gene Modal
BGIBMGA013776
Annotation
PREDICTED:_multiple_C2_and_transmembrane_domain-containing_protein_1-like_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 4.661
 

Sequence

CDS
ATGAGCGATAATCTTGAAACGATGGCGGACAAAGAGAACAAAATGGACAAATTAAAGAAGAACTTCATAAGAATCCAAGGTAAAATCCAAGATAGAATGGATGATATACACGATCAAGTACAGAACAGAATAGAGAGATCGAAAATTTCACGATTCATGTCACATATATCTTCGGAAGAGAGAAGTTCAATAGAGGATAATCAAGAAGAAAAAGAAGACGGTGCTTGTACCGAATCCGTAGAAGTTCGAGAAAACACGAGTAGAATTCCACATGTTGTTGTAGATGAGCCTCCGGATACGAACCAAGATCCTAAGGATATCTGTAAGCACTTTATAAGTATTGAAAAGGAAAATGTTCTGTACAAGAAGAGAAGTAAATCAGTCACAAATCTGTCATATGACGATGAATCAAACGATTACAGTTCCACAGACTCCTGCGTCTCCTGTTTCTCATCTAGCGATGAAAGACCAACGGAACTGCGACCCAGGGCAGGCAGTCTGCCAGGGCCCCACCCGGACTTGCAAACAGCCTTCAGTTCGTGCACTGAGCTCATCGAGAAAATCGGTAACCGCTTCCCGAAGCTCAAAAGCAGAGGGGACCGAATTCACAGGTTCACTCTTATCGCCACTGATCTTTTCGTTTCTAAAGTCAAGGAAGGCATAAGATAA
Protein
MSDNLETMADKENKMDKLKKNFIRIQGKIQDRMDDIHDQVQNRIERSKISRFMSHISSEERSSIEDNQEEKEDGACTESVEVRENTSRIPHVVVDEPPDTNQDPKDICKHFISIEKENVLYKKRSKSVTNLSYDDESNDYSSTDSCVSCFSSSDERPTELRPRAGSLPGPHPDLQTAFSSCTELIEKIGNRFPKLKSRGDRIHRFTLIATDLFVSKVKEGIR

Summary

Pfam
PF08372   PRT_C        + More
PF00168   C2
Interpro
IPR000008   C2_dom        + More
IPR013583   PRibTrfase_C       
IPR035892   C2_domain_sf       
Gene 3D

Ontologies

Topology

Length:
222
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.0007
Exp number, first 60 AAs:
0
Total prob of N-in:
0.08192
outside
1  -  222
 
 

Population Genetic Test Statistics

Pi
66.588367
Theta
139.759601
Tajima's D
-1.599307
CLR
2158.775861
CSRT
0.0526973651317434
Interpretation
Uncertain
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