SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO16307
Pre Gene Modal
BGIBMGA013772
Annotation
PREDICTED:_LOW_QUALITY_PROTEIN:_A-kinase_anchor_protein_13_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 4.518
 

Sequence

CDS
ATGTACGAGAGACAACAGCTGCAAGCAGCGAGACAAGAACTGGCGGAACAACAGAAGGACGTCGAGCAACAGCGGGAGCGGCTGTACCGGCGCCTGGAAAGGCTGCAGCAGCACGGTGGATCTCAAGAAGAGATAGCTAGTGTGGGCACTCTGTCGCCGGACTCCAGCGTCAGCGACACTACCAGGAGGAAAGAACCTAAGTGGAGAAACAGCCGCGGCTCTACCGGCGCGGAGCCCCCGGCGCCCGCGCTGCCGCCCCCGCTGCTGCTGTCGGCGCAGAACGAGACCCGCGCCACGGTGCACGCCTCCGCCATCTCCCAAATGGTAAAACAACAGTTACCACTGAAACTGGCCAACGAGAAAAGCAAACAGCCGCCTCCGGGATACCACAGACTCCACGAATCCCCCAGTGACCATCTACAACAGCAAGGCCTAGTGATACATCACACCCGGGCGGGTAGCTCCCCCGCCCCGCTGCCCTCCCAGCAGCAGACCAATAACAGAGCCACAAGGACTAACACATATCCGAAGCTTCCGGACAAATTCCGCGTCCGTTCGCCGGAGCCGACGCCCGGCAGCACCGCGCCCCCCGCAGAGGAAGAGGTGATCTTCTTCTGA
Protein
MYERQQLQAARQELAEQQKDVEQQRERLYRRLERLQQHGGSQEEIASVGTLSPDSSVSDTTRRKEPKWRNSRGSTGAEPPAPALPPPLLLSAQNETRATVHASAISQMVKQQLPLKLANEKSKQPPPGYHRLHESPSDHLQQQGLVIHHTRAGSSPAPLPSQQQTNNRATRTNTYPKLPDKFRVRSPEPTPGSTAPPAEEEVIFF

Summary

Pfam
PF00621   RhoGEF        + More
PF17838   PH_16
Interpro
IPR035899   DBL_dom_sf        + More
IPR041020   PH_16       
IPR011993   PH-like_dom_sf       
IPR001849   PH_domain       
IPR000219   DH-domain       
IPR002219   PE/DAG-bd       
SUPFAM
SSF48065   SSF48065       
Gene 3D

Ontologies

Topology

Length:
205
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0
Exp number, first 60 AAs:
0
Total prob of N-in:
0.19106
outside
1  -  205
 
 

Population Genetic Test Statistics

Pi
294.929932
Theta
164.721965
Tajima's D
2.680908
CLR
0.246811
CSRT
0.958602069896505
Interpretation
Uncertain
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